FFCP PHASE1:Hg19::chr1:16174050..16174075,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17575 | |||
|TSSclassifier=strong | |||
|UniProt=Q96T58 | |||
|association_with_transcript=-283bp_to_ENST00000375759,NM_015001,uc001axk.1_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_7_at_SPEN_5end | |||
|id=chr1:16174050..16174075,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.42e-30;7!CL:0000586;1.42e-30;7!CL:0002322;2.17e-30;5!CL:0002321;5.35e-10;15!CL:0000540;5.97e-10;6!CL:0000404;5.97e-10;6!CL:0002174;3.84e-07;1!CL:0002591;3.84e-07;1!CL:0000501;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.32e-31,5;CL:0000039,1.77e-30,7;CL:0000586,1.77e-30,7;CL:0000047,1.68e-12,8;CL:0000540,6.16e-10,6;CL:0000031,6.16e-10,6;CL:0000404,6.16e-10,6;CL:0002174,3.62e-07,1;CL:0000501,3.62e-07,1;CL:0002591,6.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.40e-15;10!UBERON:0005564;4.40e-15;10!CL:0000031;5.97e-10;6 | |||
|ontology_enrichment_disease=DOID:162!8.11e-12!235;DOID:305!1.08e-11!106;DOID:14566!2.57e-11!239;DOID:0050687!3.55e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.20e-16;22!DOID:2994;3.20e-16;22!DOID:3347;3.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.02e-16,22;DOID:2994,3.02e-16,22;DOID:3347,3.21e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.53e-12;8!UBERON:0003135;3.80e-09;11!UBERON:0000922;6.23e-08;49!UBERON:0000991;4.75e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.53e-12,8;UBERON:0003135,3.81e-09,11;UBERON:0000991,4.76e-07,21;UBERON:0009196,4.76e-07,21;UBERON:0009117,4.76e-07,21;UBERON:0005564,4.76e-07,21 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0.392937226493138,0.364295288292542,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0.286804595389004,4.87894824518382,4.90360142789496,3.36962434321603,1.65857688024593,1.7662459561294,4.01475094983413,0,0,0,0,0,0,0.505754070234305,0.241011029883482,0.441175890929576,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0.256686072559497,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0,0,0,0,0.308419387605311,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0.522870902049801,0.256450125116389,0.328014645699706,0,0.206082023295445,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0,0.307007349452259,0,0.429680979473094,0.580066775656914,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.743212700502875,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,1.67043704337145,1.23087398947712,0,0,0,0,0,1.21360521749513,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.494411622680279,0.422250816255987,0,0.552567831062295,0.251932747854276,0.511343412510774,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0.262379999988587,0,0.1137934482855,0.254253650292766,1.18193840883968,0.344743373241465,1.16641845353302,0.173624994933292,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,0.21787692703798,0,0.307801034015188,0,1.61394733071642,0.0897576444097721,1.08647371922008,0,0,0,0,0,0.166211681900156,0.902382642468723,0,0.503464760927528,0.189753732724185,0.635746315921515,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.337005664903385,0,0.468528891450678,0,0.391329237864179,0.485560759068186,0.394584402849391,0,0,0,0.450970258243478,1.24425829676697,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.261177619741208,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0.426905989478705,0.19980960958213,0.288180834308212,0,0.686379991447858,0.432164393964449,0.248505071130865,0.707082103850386,0.135904206073614,0.313808538937,0,0.288950589901519,0,0,0,1.28929632425987,0.262887354279314,0.279282401272254,0,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0,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| |||
|short_description=p7@SPEN | |||
}} |
Revision as of 16:34, 10 January 2014
Short description: | p7@SPEN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPEN_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -283bp_to_ENST00000375759, NM_015001, uc001axk.1_5end |
EntrezGene: | SPEN |
HGNC: | 17575 |
UniProt: | Q96T58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.32e-31 | 5 |
germ line cell | 1.77e-30 | 7 |
germ cell | 1.77e-30 | 7 |
neuronal stem cell | 1.68e-12 | 8 |
neuron | 6.16e-10 | 6 |
neuroblast | 6.16e-10 | 6 |
electrically signaling cell | 6.16e-10 | 6 |
follicular cell of ovary | 3.62e-07 | 1 |
granulosa cell | 3.62e-07 | 1 |
smooth muscle cell of the pulmonary artery | 6.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.53e-12 | 8 |
male reproductive organ | 3.81e-09 | 11 |
gonad | 4.76e-07 | 21 |
indifferent external genitalia | 4.76e-07 | 21 |
indifferent gonad | 4.76e-07 | 21 |
gonad primordium | 4.76e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.02e-16 | 22 |
germ cell cancer | 3.02e-16 | 22 |
osteosarcoma | 3.21e-07 | 1 |