Personal tools

MCL coexpression mm9:656: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.139651564312394,0.912837031014523,1.00649053963966,0.751242586850184,0.786793158313575,0.719305104142423,0.691843725063126,-0.0888668216863236,-0.00600894718075254,-0.0553178094728359,-0.140952503802772,-0.139357789980958,-0.103045417146644,-0.136771882416359,-0.184913751347695,-0.119448563546585,-0.20821666818953,-0.114488591801147,-0.10543850587173,-0.0408173394524135,0.65298128770691,-0.085643897435277,-0.109729218149849,0.630416858928594,0.664851014435248,0.92581450277971,0.862052696990518,0.835581757576677,0.568528393607122,0.512393858917478,0.65327613247305,-0.243954027849268,-0.260313671314814,-0.309063525589841,0.416641984760617,0.344296002760217,0.379152564377033,-0.120456133484574,-0.136129641354863,-0.14413108346971,-0.0504995598266827,-0.17218119222129,-0.161158010506232,-0.116276061049657,-0.112679766782267,-0.139117687822474,-0.159564945223839,-0.133397824592261,-0.0772958310526218,-0.0886997103254147,-0.121673712884473,-0.144643059214931,-0.054603504700929,-0.0706427157555475,-0.0999330595523379,-0.164601253237824,-0.152244464321808,-0.232796841652039,0.00985595055650198,-0.0806518661174925,-0.0560780646893206,-0.161821565986017,-0.204811891070704,-0.162285065619189,-0.214564214741725,-0.202846626743043,-0.125882381617061,-0.0658797127190476,-0.0403155203726866,-0.0588730632873335,-0.0527508219146853,0.0111639040993844,-0.0505688478182794,-0.0235896209447066,-0.0375438928650183,-0.0602328784737245,-0.220526975084147,-0.0266121338193698,-0.055606660989647,0.0119229256920842,0.027938616603881,0.021987332664173,-0.103309247660921,-0.0959601646812765,-0.0985653174481305,0.0424556588526445,0.0720160346790839,0.0169525656540827,-0.123923657290457,-0.095386199287915,0.0774965882566832,-0.0570207759461347,0.00526678405443672,-0.0191151365825823,-0.140738563656545,-0.0520531661743199,0.19141277356048,-0.251146243531968,-0.287804837199417,-0.287541311174384,0.214881189875417,-0.378414830395459,-0.229568306424656,-0.367709927750955,0.173822661654913,0.217846315769488,0.24531678584874,0.317313872529058,-0.118895886534024,-0.00514643881230718,-0.0709798987364309,-0.0813668732207362,-0.0577697403986213,-0.0354917009362533,-0.0546514972355859,-0.0471386335141364,0.265652572275246,-0.0547968919011507,-0.0681129835529932,-0.119025867976831,-0.132496922925686,-0.13511810857162,0.286496997310756,0.00298993725314101,-0.00799513570090548,0.460224931456012,-0.0345322934051352,-0.0835400531363641,-0.030770600901705,-0.114820821141171,-0.0566738801785976,0.0167036967334307,-0.049534100876406,0.0113226528392679,-0.0613503860293956,-0.0332029982777463,0.0189843687293342,0.0337031539572265,0.204116031967836,0.183216338200454,-0.0611943326009932,-0.014998621493893,-0.0274100318990626,0.00382239559908702,0.0555804974616286,0.014415172701154,0.0840243839272545,0.00891833259511549,-0.114793270348777,-0.109248900437126,-0.051826906193052,-0.0633263687852236,-0.069607790293181,0.0227267287390915,0.0515367598129276,-0.0918195144588546,-0.186180770459859,-0.132154847357316,-0.0402281485627892,-0.119680105913506,-0.195199794815728,-0.12296798698894,-0.109387147596804,-0.135977039956286,-0.0959954755964832,-0.150511725840266,-0.126909649604243,-0.0860435110011711,-0.0913097384701454,-0.0866349541077446,-0.0757346747294927,-0.0917771978797683,-0.111558978151691,-0.0499157052759747,-0.0242612268794054,-0.0220272246881744,0.572561506070397,0.380750895417772,-0.099907379282752,-0.0364469965502549,0.0941736706099617,0.163721215694649,0.196863138624228,0.255036250062475,0.410794277528413,0.308458965069515,0.320395391779787,0.312850822917171,0.256710078724058,0.37952633000542,0.404720406712024,0.456393585983202,-0.0636753509981093,-0.00664144372651162,-0.0760868977859972,0.0249792542854083,0.0582256337303063,0.119671174334256,0.0862218097780639,0.140795419188976,0.127499543187954,0.184886399590781,-0.0636784096646425,-0.182323627062482,-0.173341929589249,-0.172526844107384,-0.184596234517531,-0.0383316635817145,-0.0647271484359896,-0.0622972738871172,-0.0981289364673434,-0.0967339946770782,-0.136798498292088,-0.023228436842116,-0.0441159795293953,-0.0530414205056212,-0.0621415556789497,-0.0492881285824083,0.0371383963335825,-0.0715258068806519,-0.0828317531722532,-0.0215059768646149,-0.00654928192360014,0.071164073430334,0.0900689476589898,0.153546768116819,0.000258582583340362,0.0147635600972288,0.0778396823211671,0.039982774307546,0.0241038794491356,0.0581139892043665,-0.227094925741193,-0.226334332380266,0.219882966054578,0.192696665942131,-0.135692497019103,-0.076619552501504,-0.278777164468071,-0.108223366188678,-0.0779670641632942,-0.106379560375207,-0.0632003365333498,-0.060773487342385,-0.0810595221712687,-0.0452778842334175,-0.0633281106130564,-0.0602143360938679,-0.0635650061915799,-0.0867147596705998,0.00751077239214868,-0.0454808576977659,0.0273961653339905,0.0874528056838666,0.0406101118120028,-0.0274736473009561,0.0162483017432903,0.0652467918386614,0.0745116794027771,0.0637521682105752,0.14439386370842,0.0704688693204626,0.0590114629825205,0.108872105921702,0.137394438610325,0.115581810148844,0.0373928982948067,0.049251668964203,0.0263363315797436,0.0891840545838658,0.0387839779791198,0.0363021525830745,0.0566210887669746,0.0462818072076584,0.0573027573400564,0.149292295839976,0.0854723389430894,0.15410817687066,0.148575635454447,0.124442799016356,0.169464081218756,0.19222990023654,0.372091936105053,-0.154410650443324,-0.135965521813807,-0.126570345399882,-0.214485864069446,-0.171367847094145,-0.17219183088212,-0.0716343018869704,0.0548488980026587,0.0619546731595587,0.0266652018120487,0.16337707051521,-0.0765807398269139,0.0291224951597444,0.0731438561279251,0.120733432360725,0.148607539195945,0.169141242051332,0.16157301326384,0.245530979042875,0.422374153091097,0.180863181093739,1.32573475694269,-0.110154760433922,-0.114898899959971,-0.0619827998777751,-0.0310915515323488,-0.0371621320291896,-0.0558429317212645,0.0605266116488046,0.0604327855242555,0.310210424258714,0.9322520201762,-0.133208581186223,-0.0180166801899469,-0.00511321081696523,-0.0486228792216201,-0.0403502806209371,-0.0794388039105592,-0.0223894880568206,-0.074566254438259,-0.0554497387914956,-0.0654740978788775,-0.0791409011644533,-0.050604590058888,-0.0577457314995553,-0.068666566124534,0.247616949291807,0.0812593192043951,-0.0261040351559149,-0.00583388967937769,0.093108215365383,0.0811136937035374,0.097326659524975,0.2765669832118,0.200040591496674,-0.0178474077694588,-0.0307598897921102,-0.088131775938682,-0.0142734022002807,-0.102706247979627,-0.103296285595208,-0.109630214301414,-0.0424611757775788,-0.0396830720151647,-0.0740212622337669,-0.0942075592900021,-0.0600560627744894,-0.047405285425379,-0.0404572328575206,-0.0267179461719603,0.0508100398391695,-0.0172052158866355,-0.0248921652028668,-0.0171995869478174,0.0229880255502936,-0.00412080003710443,0.0370098386968499,0.0240317030837425,0.0223076458891742,0.0589041181210364,0.0546125328380446,0.0664640303909499,0.0354648612056058,0.0624072985500267,0.0298997185408252,-0.016954312373461,0.0169827461164139,0.0533892616971387,-0.00131293710510248,-0.00223949942139728,0.028575406158027,0.0151154498343685,-0.0145113178929996,0.0296004702434866,0.012839439792356,0.0354721941920697,0.050716511061383,0.00285942144341775,0.0375729627646025,0.0453191217447562,0.0503109047062357,0.0290632363344002,0.0770454312602538,-0.0212275580960554,-0.0305029171077137,-0.114352046994105|coexpression_dpi_cluster_scores_median=0.0495723036472577,0.840895010810998,0.918029698467643,0.848895802944122,0.973285555253398,0.697219529322247,0.630486553535026,0,0,-0.0266662510627417,-0.190055625389731,-0.141708455250597,0,0,-0.1625481603806,-0.175040580617183,-0.285778187127263,-0.0695031073996141,-0.0486858628841382,0,0.559611893566035,0,-0.00174536724858343,0.529597888010136,0.624460515522604,0.8486750803292,0.838038679160028,0.774942901994071,0.56705102271737,0.474624616497933,0.657790677985662,-0.19414474624332,-0.369226634197866,-0.407670650756018,0.288171995059246,0.161976513088815,0.281183718712171,-0.0232015563814409,-0.0564207412825335,-0.175040580617183,0,0,-0.00316489771975284,0,-0.00499903936950896,-0.0392423608387505,-0.156667586278885,-0.0576129417248451,0,-0.0258210048553955,-0.022599027996829,-0.0207214574266801,-0.000570930086805976,0,-0.175040580617183,-0.0756156768269306,-0.0656195016198763,0,0,0,-0.148842198121377,-0.103065188842858,-0.13137092240783,-0.0136875966526767,-0.0668602264875713,-0.175040580617183,-0.0240305593883885,0,-0.0862517200442823,-0.120042446860782,-0.125339825657173,0.109123086691028,0,0,-0.0988769423031533,-0.0989346736576058,-0.175040580617183,-0.033661333828916,-0.0181096607516187,0,0.0351282274049005,0.00706389723553882,0,-0.0802043883738977,-0.0463921883684539,0.0783912792833749,0.108816382318513,0,-0.143338837034736,-0.0698403192901773,0.0223292820907279,0,0,0.0918532338185025,-0.168597743202991,0,0.157471068874775,-0.266667061370752,-0.228072858532648,-0.253884926949886,0.123084452803905,-0.44931610197799,-0.175040580617183,-0.175040580617183,0.0365821509273114,0.0980757838043811,0.0933554478159089,0.275633736251135,-0.000513137839079358,-0.0170593946889295,0,-0.00634698287842594,-0.0422417309287828,0,-0.083311238806687,0,0.229890314694887,-0.0316960409914503,0,-0.118898481269918,-0.119169335985697,-0.175040580617183,0.168732472426575,0,-0.0108909787954272,0.509073386804215,0,0,0.00344165319770348,-0.0138607380703069,0,0,0,0,-0.0135356982245803,0,-0.0228244148559751,0.0509235292940968,0.160110259730835,0.15255853577271,0,-0.0448464443960419,0,0,0,0,0.00228908985151,0,0,-0.0888205739986345,0,-0.0283864474292758,0,0.048809395642602,0.0337624680473849,-0.00216782253944259,-0.175040580617183,-0.0822770026771136,-0.0738522411169321,-0.0577148446147556,-0.175040580617183,-0.0644834388805343,-0.121648415184913,-0.130950682585256,-0.0582554941680515,-0.0822491423802114,-0.090550238335205,-0.050254930614091,-0.00754639727070894,0,0,0,-0.0209925468852539,0.0115840268557262,0,0.00964532843626631,0.655790352325075,0.319350908058961,-0.0411445925077729,0,0.0097935445182461,0.0797901069290224,0.147867292502975,0.250325074246602,0.384852974053072,0.298648885016305,0.316780018051605,0.179680560608994,0.161376026391496,0.357082238669873,0.328188436130186,0.506997022800175,-0.00343636438501449,0,-0.0377567003433448,-0.0300838017548732,0,0.0570083229196787,0,0,0,0.0399906773036536,0,-0.144217917133978,-0.151371790597322,-0.0869533794275988,-0.149646580792902,0.0308564583544133,-0.0620504997304732,-0.00511241645166338,0,0.0150452727150572,-0.119490030771198,0,0,0,0,0,0.0652621881978807,-0.0395989677060583,-0.0452409935844036,-0.0725035526888014,0,0.0153629331166074,0.0182392555263735,0.116284302030719,0.0554922149635921,0,0.0622281024312514,0.0398744222184141,0.0797816305465711,0.0586723554240733,-0.37878150932366,-0.175040580617183,0.152594113994905,0.19477841646509,-0.11037650392205,-0.0252820672004339,-0.164997824135342,-0.0888212244019844,-0.0337667069479863,-0.0376408503258499,0,0,-0.00637382179998558,0,0.0105051091132756,0,0,-0.0765517770353791,0.0415457391751639,0,0,0.0224418539084033,-0.0254589720206199,0,-0.0117837040026794,0.0196999348950484,0.0723913810357129,-0.0123488256958074,0.0516819424776171,0.0396544521363815,0,0.0188450496254433,0,0,0.0888794573773637,0.0611818270166691,0,0,0,0.00819031568874079,0,0,0.0435299072080684,0.137298102331012,0,0.158246201101189,0.12217320243535,0.118323476739629,0.21100657791907,0.177749778376983,0.298255611912792,-0.166696997689736,-0.139477910706014,-0.146277519854445,-0.175040580617183,-0.100906091885629,-0.175040580617183,-0.0324334875308302,0.102702808745007,0.00183646930039572,0.0271006635277762,0.116033004219364,-0.0443663197634909,0,0,0.0684157077945626,0.0936516904655316,0.142150462348283,0.10580811832574,0.187884100378868,0.391877175805295,0.260369327914123,1.27603720291642,0,-0.0822298456885799,0,0,-0.0400262425352566,-0.0487376177129097,0.0110517081728462,0.0129547017253424,0.171190417567041,0.869540342474948,-0.0527856954129158,-0.101042313438011,-0.00431233843576573,0,-0.0216689443919808,-0.0150357302051269,-0.00454951323136699,-0.117921896172809,-0.0265566547013694,-0.0119438202067361,-0.0253713919199475,-0.0159670065456134,-0.00792767983946496,0.0133203290712826,0.195373122988104,0,-0.000529196698197398,0,0.130612034315382,0.0219431300378507,0,0.260639621994194,0.1631613209418,0,0,0,0.0688732037536692,0,0,-0.05697369407794,0,0,0.00616261155979272,-0.0585056275998266,-0.0856484455402342,0,0,0,0,0,-0.0206959138074401,0,0,0,0.015677452477748,0.0100300491922671,0.00375732231110582,0.0472245945615809,0.0937901941641379,0.0478060235615863,0.0240996599266944,0.0544739753617298,0,0,0,0.00806345706944467,-0.0336608010274904,0,0.0276931121731862,0.0158542849463396,-0.0144673581991822,0.0340957064802357,0,0.0333131150724124,0.0408018333703219,0.0349908944129114,0,0,0.00898649743194724,-0.0145342251927494,0.07105254212488,0,-0.00928874846835026,-0.0844764647852951|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0002563!5.06e-07!9;CL:0002251!5.06e-07!9|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000160!7.72e-16!31;UBERON:0005409!2.37e-11!47;UBERON:0000344!8.85e-11!15;UBERON:0001242!1.58e-09!13;UBERON:0000060!1.58e-09!13;UBERON:0001262!1.58e-09!13;UBERON:0004786!1.58e-09!13;UBERON:0000485!1.57e-07!11;UBERON:0003350!5.06e-07!9;UBERON:0004808!5.06e-07!9;UBERON:0001277!5.06e-07!9|tfbs_overrepresentation_for_novel_motifs=1.44698,0.490989,0.7433,0.329881,0.176699,0.342839,0.425757,0.106126,0.112618,2.75824,1.00157,1.06556,0.106288,0.437133,0.189961,0,0.619876,0.170475,0.318616,0.171249,0.238546,0.521547,0.436294,0.175485,0.276437,0.4628,0.630402,0.361771,1.15025,0.500344,0.349031,0.717576,0.504188,0.270473,1.06026,0.308746,2.88023,0.411296,0.144953,0.391645,0.173534,0.353696,0.104243,0.191571,1.11259,0.856658,0.543674,0.376103,0.081888,0.61724,0.603113,0.488021,0.829247,0.855661,0.87275,0.443782,0.223087,0.40287,0.0851299,0.441884,0.698157,1.24284,0.383763,0.592318,0.45416,0.631188,1.00675,1.3527,0.693631,1.20659,0.706068,0.720972,2.19534,0.905636,2.62948,0.54852,0.0786324,0.532872,0.681539,0.242107,0.110993,0.636582,0.495545,0.333618,0.792744,2.598,0.143445,0.500771,0.548334,1.51408,1.07554,0.797601,0.730003,0.535058,1.38871,0.129056,0.340672,0.732731,0.543917,0.0534645,0.161581,0.717305,0.838603,0.603683,0.602672,0.930972,0.660145,0.372438,0.688705,0.67437,0.286453,0.840348,0.243062,0.390066,1.0825,0.172131,2.01901,0.333247,0.621127,0.158673,0.910937,0.572279,0.464505,0.532013,1.13603,0.685116,0.433317,0.723425,1.00525,1.03388,0.821997,0.323373,0.976125,0.456508,1.10385,0.115066,0.300001,0.35497,1.05527,1.88134,1.48237,1.01139,0.475785,0.727736,0.596462,0.354106,0.546641,1.84176,0.816464,1.60254,0.507931,2.49507,0.857198,0.415832,0.455644,0.93735,0.488969,0.57908,0.290467,1.47278,1.06466,0.791909,0.685546,0.284483,0.593295,0.448733,0.160658,0.413167,2.82591|tfbs_overrepresentation_jaspar=MA0003.1;4.36585,MA0004.1;0.330313,MA0006.1;0.547312,MA0007.1;0.850001,MA0009.1;0.743257,MA0014.1;2.34863,MA0017.1;0.598706,MA0019.1;0.567591,MA0024.1;0.70077,MA0025.1;0.971686,MA0027.1;2.37948,MA0028.1;0.194782,MA0029.1;0.679737,MA0030.1;0.686088,MA0031.1;0.651724,MA0038.1;0.462726,MA0040.1;0.755433,MA0041.1;0.263922,MA0042.1;0.252679,MA0043.1;0.837621,MA0046.1;0.778239,MA0048.1;1.65044,MA0050.1;0.365212,MA0051.1;0.471092,MA0052.1;0.76328,MA0055.1;0.479469,MA0056.1;0,MA0057.1;0.406124,MA0058.1;0.246908,MA0059.1;0.257372,MA0060.1;1.28515,MA0061.1;0.147394,MA0063.1;0,MA0066.1;0.452472,MA0067.1;1.08124,MA0068.1;0.735122,MA0069.1;0.76361,MA0070.1;0.75417,MA0071.1;0.364454,MA0072.1;0.745922,MA0073.1;0.535798,MA0074.1;0.419185,MA0076.1;0.223625,MA0077.1;0.724865,MA0078.1;0.502121,MA0081.1;0.277253,MA0083.1;0.836845,MA0084.1;1.4063,MA0087.1;0.794721,MA0088.1;0.534411,MA0089.1;0,MA0090.1;0.299987,MA0091.1;0.906056,MA0092.1;0.300264,MA0093.1;0.20148,MA0095.1;0,MA0098.1;0,MA0100.1;0.408523,MA0101.1;0.73212,MA0103.1;1.16365,MA0105.1;0.556739,MA0106.1;1.26962,MA0107.1;0.211681,MA0108.2;0.589413,MA0109.1;0,MA0111.1;0.312463,MA0113.1;0.482899,MA0114.1;0.446898,MA0115.1;0.84036,MA0116.1;0.186271,MA0117.1;0.808813,MA0119.1;0.265536,MA0122.1;0.828211,MA0124.1;1.02871,MA0125.1;0.955734,MA0130.1;0,MA0131.1;0.563262,MA0132.1;0,MA0133.1;0,MA0135.1;0.873285,MA0136.1;0.437601,MA0139.1;1.67615,MA0140.1;0.408417,MA0141.1;0.233109,MA0142.1;0.63775,MA0143.1;1.24578,MA0144.1;0.147954,MA0145.1;1.75225,MA0146.1;5.90064,MA0147.1;0.475899,MA0148.1;0.344843,MA0149.1;0.269772,MA0062.2;0.968877,MA0035.2;0.412747,MA0039.2;3.42044,MA0138.2;0.555696,MA0002.2;0.343346,MA0137.2;0.230686,MA0104.2;0.744492,MA0047.2;0.46201,MA0112.2;0.9035,MA0065.2;0.033123,MA0150.1;0.849777,MA0151.1;0,MA0152.1;0.46211,MA0153.1;0.889592,MA0154.1;0.434137,MA0155.1;0.637282,MA0156.1;0.222905,MA0157.1;0.606944,MA0158.1;0,MA0159.1;0.957875,MA0160.1;0.347545,MA0161.1;0,MA0162.1;2.86908,MA0163.1;1.12282,MA0164.1;0.437937,MA0080.2;0.212408,MA0018.2;0.446948,MA0099.2;0.549696,MA0079.2;0.912106,MA0102.2;1.45844,MA0258.1;0.421574,MA0259.1;0.891672,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.139651564312394,0.912837031014523,1.00649053963966,0.751242586850184,0.786793158313575,0.719305104142423,0.691843725063126,-0.0888668216863236,-0.00600894718075254,-0.0553178094728359,-0.140952503802772,-0.139357789980958,-0.103045417146644,-0.136771882416359,-0.184913751347695,-0.119448563546585,-0.20821666818953,-0.114488591801147,-0.10543850587173,-0.0408173394524135,0.65298128770691,-0.085643897435277,-0.109729218149849,0.630416858928594,0.664851014435248,0.92581450277971,0.862052696990518,0.835581757576677,0.568528393607122,0.512393858917478,0.65327613247305,-0.243954027849268,-0.260313671314814,-0.309063525589841,0.416641984760617,0.344296002760217,0.379152564377033,-0.120456133484574,-0.136129641354863,-0.14413108346971,-0.0504995598266827,-0.17218119222129,-0.161158010506232,-0.116276061049657,-0.112679766782267,-0.139117687822474,-0.159564945223839,-0.133397824592261,-0.0772958310526218,-0.0886997103254147,-0.121673712884473,-0.144643059214931,-0.054603504700929,-0.0706427157555475,-0.0999330595523379,-0.164601253237824,-0.152244464321808,-0.232796841652039,0.00985595055650198,-0.0806518661174925,-0.0560780646893206,-0.161821565986017,-0.204811891070704,-0.162285065619189,-0.214564214741725,-0.202846626743043,-0.125882381617061,-0.0658797127190476,-0.0403155203726866,-0.0588730632873335,-0.0527508219146853,0.0111639040993844,-0.0505688478182794,-0.0235896209447066,-0.0375438928650183,-0.0602328784737245,-0.220526975084147,-0.0266121338193698,-0.055606660989647,0.0119229256920842,0.027938616603881,0.021987332664173,-0.103309247660921,-0.0959601646812765,-0.0985653174481305,0.0424556588526445,0.0720160346790839,0.0169525656540827,-0.123923657290457,-0.095386199287915,0.0774965882566832,-0.0570207759461347,0.00526678405443672,-0.0191151365825823,-0.140738563656545,-0.0520531661743199,0.19141277356048,-0.251146243531968,-0.287804837199417,-0.287541311174384,0.214881189875417,-0.378414830395459,-0.229568306424656,-0.367709927750955,0.173822661654913,0.217846315769488,0.24531678584874,0.317313872529058,-0.118895886534024,-0.00514643881230718,-0.0709798987364309,-0.0813668732207362,-0.0577697403986213,-0.0354917009362533,-0.0546514972355859,-0.0471386335141364,0.265652572275246,-0.0547968919011507,-0.0681129835529932,-0.119025867976831,-0.132496922925686,-0.13511810857162,0.286496997310756,0.00298993725314101,-0.00799513570090548,0.460224931456012,-0.0345322934051352,-0.0835400531363641,-0.030770600901705,-0.114820821141171,-0.0566738801785976,0.0167036967334307,-0.049534100876406,0.0113226528392679,-0.0613503860293956,-0.0332029982777463,0.0189843687293342,0.0337031539572265,0.204116031967836,0.183216338200454,-0.0611943326009932,-0.014998621493893,-0.0274100318990626,0.00382239559908702,0.0555804974616286,0.014415172701154,0.0840243839272545,0.00891833259511549,-0.114793270348777,-0.109248900437126,-0.051826906193052,-0.0633263687852236,-0.069607790293181,0.0227267287390915,0.0515367598129276,-0.0918195144588546,-0.186180770459859,-0.132154847357316,-0.0402281485627892,-0.119680105913506,-0.195199794815728,-0.12296798698894,-0.109387147596804,-0.135977039956286,-0.0959954755964832,-0.150511725840266,-0.126909649604243,-0.0860435110011711,-0.0913097384701454,-0.0866349541077446,-0.0757346747294927,-0.0917771978797683,-0.111558978151691,-0.0499157052759747,-0.0242612268794054,-0.0220272246881744,0.572561506070397,0.380750895417772,-0.099907379282752,-0.0364469965502549,0.0941736706099617,0.163721215694649,0.196863138624228,0.255036250062475,0.410794277528413,0.308458965069515,0.320395391779787,0.312850822917171,0.256710078724058,0.37952633000542,0.404720406712024,0.456393585983202,-0.0636753509981093,-0.00664144372651162,-0.0760868977859972,0.0249792542854083,0.0582256337303063,0.119671174334256,0.0862218097780639,0.140795419188976,0.127499543187954,0.184886399590781,-0.0636784096646425,-0.182323627062482,-0.173341929589249,-0.172526844107384,-0.184596234517531,-0.0383316635817145,-0.0647271484359896,-0.0622972738871172,-0.0981289364673434,-0.0967339946770782,-0.136798498292088,-0.023228436842116,-0.0441159795293953,-0.0530414205056212,-0.0621415556789497,-0.0492881285824083,0.0371383963335825,-0.0715258068806519,-0.0828317531722532,-0.0215059768646149,-0.00654928192360014,0.071164073430334,0.0900689476589898,0.153546768116819,0.000258582583340362,0.0147635600972288,0.0778396823211671,0.039982774307546,0.0241038794491356,0.0581139892043665,-0.227094925741193,-0.226334332380266,0.219882966054578,0.192696665942131,-0.135692497019103,-0.076619552501504,-0.278777164468071,-0.108223366188678,-0.0779670641632942,-0.106379560375207,-0.0632003365333498,-0.060773487342385,-0.0810595221712687,-0.0452778842334175,-0.0633281106130564,-0.0602143360938679,-0.0635650061915799,-0.0867147596705998,0.00751077239214868,-0.0454808576977659,0.0273961653339905,0.0874528056838666,0.0406101118120028,-0.0274736473009561,0.0162483017432903,0.0652467918386614,0.0745116794027771,0.0637521682105752,0.14439386370842,0.0704688693204626,0.0590114629825205,0.108872105921702,0.137394438610325,0.115581810148844,0.0373928982948067,0.049251668964203,0.0263363315797436,0.0891840545838658,0.0387839779791198,0.0363021525830745,0.0566210887669746,0.0462818072076584,0.0573027573400564,0.149292295839976,0.0854723389430894,0.15410817687066,0.148575635454447,0.124442799016356,0.169464081218756,0.19222990023654,0.372091936105053,-0.154410650443324,-0.135965521813807,-0.126570345399882,-0.214485864069446,-0.171367847094145,-0.17219183088212,-0.0716343018869704,0.0548488980026587,0.0619546731595587,0.0266652018120487,0.16337707051521,-0.0765807398269139,0.0291224951597444,0.0731438561279251,0.120733432360725,0.148607539195945,0.169141242051332,0.16157301326384,0.245530979042875,0.422374153091097,0.180863181093739,1.32573475694269,-0.110154760433922,-0.114898899959971,-0.0619827998777751,-0.0310915515323488,-0.0371621320291896,-0.0558429317212645,0.0605266116488046,0.0604327855242555,0.310210424258714,0.9322520201762,-0.133208581186223,-0.0180166801899469,-0.00511321081696523,-0.0486228792216201,-0.0403502806209371,-0.0794388039105592,-0.0223894880568206,-0.074566254438259,-0.0554497387914956,-0.0654740978788775,-0.0791409011644533,-0.050604590058888,-0.0577457314995553,-0.068666566124534,0.247616949291807,0.0812593192043951,-0.0261040351559149,-0.00583388967937769,0.093108215365383,0.0811136937035374,0.097326659524975,0.2765669832118,0.200040591496674,-0.0178474077694588,-0.0307598897921102,-0.088131775938682,-0.0142734022002807,-0.102706247979627,-0.103296285595208,-0.109630214301414,-0.0424611757775788,-0.0396830720151647,-0.0740212622337669,-0.0942075592900021,-0.0600560627744894,-0.047405285425379,-0.0404572328575206,-0.0267179461719603,0.0508100398391695,-0.0172052158866355,-0.0248921652028668,-0.0171995869478174,0.0229880255502936,-0.00412080003710443,0.0370098386968499,0.0240317030837425,0.0223076458891742,0.0589041181210364,0.0546125328380446,0.0664640303909499,0.0354648612056058,0.0624072985500267,0.0298997185408252,-0.016954312373461,0.0169827461164139,0.0533892616971387,-0.00131293710510248,-0.00223949942139728,0.028575406158027,0.0151154498343685,-0.0145113178929996,0.0296004702434866,0.012839439792356,0.0354721941920697,0.050716511061383,0.00285942144341775,0.0375729627646025,0.0453191217447562,0.0503109047062357,0.0290632363344002,0.0770454312602538,-0.0212275580960554,-0.0305029171077137,-0.114352046994105
|coexpression_dpi_cluster_scores_median=0.0495723036472577,0.840895010810998,0.918029698467643,0.848895802944122,0.973285555253398,0.697219529322247,0.630486553535026,0,0,-0.0266662510627417,-0.190055625389731,-0.141708455250597,0,0,-0.1625481603806,-0.175040580617183,-0.285778187127263,-0.0695031073996141,-0.0486858628841382,0,0.559611893566035,0,-0.00174536724858343,0.529597888010136,0.624460515522604,0.8486750803292,0.838038679160028,0.774942901994071,0.56705102271737,0.474624616497933,0.657790677985662,-0.19414474624332,-0.369226634197866,-0.407670650756018,0.288171995059246,0.161976513088815,0.281183718712171,-0.0232015563814409,-0.0564207412825335,-0.175040580617183,0,0,-0.00316489771975284,0,-0.00499903936950896,-0.0392423608387505,-0.156667586278885,-0.0576129417248451,0,-0.0258210048553955,-0.022599027996829,-0.0207214574266801,-0.000570930086805976,0,-0.175040580617183,-0.0756156768269306,-0.0656195016198763,0,0,0,-0.148842198121377,-0.103065188842858,-0.13137092240783,-0.0136875966526767,-0.0668602264875713,-0.175040580617183,-0.0240305593883885,0,-0.0862517200442823,-0.120042446860782,-0.125339825657173,0.109123086691028,0,0,-0.0988769423031533,-0.0989346736576058,-0.175040580617183,-0.033661333828916,-0.0181096607516187,0,0.0351282274049005,0.00706389723553882,0,-0.0802043883738977,-0.0463921883684539,0.0783912792833749,0.108816382318513,0,-0.143338837034736,-0.0698403192901773,0.0223292820907279,0,0,0.0918532338185025,-0.168597743202991,0,0.157471068874775,-0.266667061370752,-0.228072858532648,-0.253884926949886,0.123084452803905,-0.44931610197799,-0.175040580617183,-0.175040580617183,0.0365821509273114,0.0980757838043811,0.0933554478159089,0.275633736251135,-0.000513137839079358,-0.0170593946889295,0,-0.00634698287842594,-0.0422417309287828,0,-0.083311238806687,0,0.229890314694887,-0.0316960409914503,0,-0.118898481269918,-0.119169335985697,-0.175040580617183,0.168732472426575,0,-0.0108909787954272,0.509073386804215,0,0,0.00344165319770348,-0.0138607380703069,0,0,0,0,-0.0135356982245803,0,-0.0228244148559751,0.0509235292940968,0.160110259730835,0.15255853577271,0,-0.0448464443960419,0,0,0,0,0.00228908985151,0,0,-0.0888205739986345,0,-0.0283864474292758,0,0.048809395642602,0.0337624680473849,-0.00216782253944259,-0.175040580617183,-0.0822770026771136,-0.0738522411169321,-0.0577148446147556,-0.175040580617183,-0.0644834388805343,-0.121648415184913,-0.130950682585256,-0.0582554941680515,-0.0822491423802114,-0.090550238335205,-0.050254930614091,-0.00754639727070894,0,0,0,-0.0209925468852539,0.0115840268557262,0,0.00964532843626631,0.655790352325075,0.319350908058961,-0.0411445925077729,0,0.0097935445182461,0.0797901069290224,0.147867292502975,0.250325074246602,0.384852974053072,0.298648885016305,0.316780018051605,0.179680560608994,0.161376026391496,0.357082238669873,0.328188436130186,0.506997022800175,-0.00343636438501449,0,-0.0377567003433448,-0.0300838017548732,0,0.0570083229196787,0,0,0,0.0399906773036536,0,-0.144217917133978,-0.151371790597322,-0.0869533794275988,-0.149646580792902,0.0308564583544133,-0.0620504997304732,-0.00511241645166338,0,0.0150452727150572,-0.119490030771198,0,0,0,0,0,0.0652621881978807,-0.0395989677060583,-0.0452409935844036,-0.0725035526888014,0,0.0153629331166074,0.0182392555263735,0.116284302030719,0.0554922149635921,0,0.0622281024312514,0.0398744222184141,0.0797816305465711,0.0586723554240733,-0.37878150932366,-0.175040580617183,0.152594113994905,0.19477841646509,-0.11037650392205,-0.0252820672004339,-0.164997824135342,-0.0888212244019844,-0.0337667069479863,-0.0376408503258499,0,0,-0.00637382179998558,0,0.0105051091132756,0,0,-0.0765517770353791,0.0415457391751639,0,0,0.0224418539084033,-0.0254589720206199,0,-0.0117837040026794,0.0196999348950484,0.0723913810357129,-0.0123488256958074,0.0516819424776171,0.0396544521363815,0,0.0188450496254433,0,0,0.0888794573773637,0.0611818270166691,0,0,0,0.00819031568874079,0,0,0.0435299072080684,0.137298102331012,0,0.158246201101189,0.12217320243535,0.118323476739629,0.21100657791907,0.177749778376983,0.298255611912792,-0.166696997689736,-0.139477910706014,-0.146277519854445,-0.175040580617183,-0.100906091885629,-0.175040580617183,-0.0324334875308302,0.102702808745007,0.00183646930039572,0.0271006635277762,0.116033004219364,-0.0443663197634909,0,0,0.0684157077945626,0.0936516904655316,0.142150462348283,0.10580811832574,0.187884100378868,0.391877175805295,0.260369327914123,1.27603720291642,0,-0.0822298456885799,0,0,-0.0400262425352566,-0.0487376177129097,0.0110517081728462,0.0129547017253424,0.171190417567041,0.869540342474948,-0.0527856954129158,-0.101042313438011,-0.00431233843576573,0,-0.0216689443919808,-0.0150357302051269,-0.00454951323136699,-0.117921896172809,-0.0265566547013694,-0.0119438202067361,-0.0253713919199475,-0.0159670065456134,-0.00792767983946496,0.0133203290712826,0.195373122988104,0,-0.000529196698197398,0,0.130612034315382,0.0219431300378507,0,0.260639621994194,0.1631613209418,0,0,0,0.0688732037536692,0,0,-0.05697369407794,0,0,0.00616261155979272,-0.0585056275998266,-0.0856484455402342,0,0,0,0,0,-0.0206959138074401,0,0,0,0.015677452477748,0.0100300491922671,0.00375732231110582,0.0472245945615809,0.0937901941641379,0.0478060235615863,0.0240996599266944,0.0544739753617298,0,0,0,0.00806345706944467,-0.0336608010274904,0,0.0276931121731862,0.0158542849463396,-0.0144673581991822,0.0340957064802357,0,0.0333131150724124,0.0408018333703219,0.0349908944129114,0,0,0.00898649743194724,-0.0145342251927494,0.07105254212488,0,-0.00928874846835026,-0.0844764647852951
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=CL:0002563!5.06e-07!9;CL:0002251!5.06e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000160!7.72e-16!31;UBERON:0005409!2.37e-11!47;UBERON:0000344!8.85e-11!15;UBERON:0001242!1.58e-09!13;UBERON:0000060!1.58e-09!13;UBERON:0001262!1.58e-09!13;UBERON:0004786!1.58e-09!13;UBERON:0000485!1.57e-07!11;UBERON:0003350!5.06e-07!9;UBERON:0004808!5.06e-07!9;UBERON:0001277!5.06e-07!9
|tfbs_overrepresentation_for_novel_motifs=1.44698,0.490989,0.7433,0.329881,0.176699,0.342839,0.425757,0.106126,0.112618,2.75824,1.00157,1.06556,0.106288,0.437133,0.189961,0,0.619876,0.170475,0.318616,0.171249,0.238546,0.521547,0.436294,0.175485,0.276437,0.4628,0.630402,0.361771,1.15025,0.500344,0.349031,0.717576,0.504188,0.270473,1.06026,0.308746,2.88023,0.411296,0.144953,0.391645,0.173534,0.353696,0.104243,0.191571,1.11259,0.856658,0.543674,0.376103,0.081888,0.61724,0.603113,0.488021,0.829247,0.855661,0.87275,0.443782,0.223087,0.40287,0.0851299,0.441884,0.698157,1.24284,0.383763,0.592318,0.45416,0.631188,1.00675,1.3527,0.693631,1.20659,0.706068,0.720972,2.19534,0.905636,2.62948,0.54852,0.0786324,0.532872,0.681539,0.242107,0.110993,0.636582,0.495545,0.333618,0.792744,2.598,0.143445,0.500771,0.548334,1.51408,1.07554,0.797601,0.730003,0.535058,1.38871,0.129056,0.340672,0.732731,0.543917,0.0534645,0.161581,0.717305,0.838603,0.603683,0.602672,0.930972,0.660145,0.372438,0.688705,0.67437,0.286453,0.840348,0.243062,0.390066,1.0825,0.172131,2.01901,0.333247,0.621127,0.158673,0.910937,0.572279,0.464505,0.532013,1.13603,0.685116,0.433317,0.723425,1.00525,1.03388,0.821997,0.323373,0.976125,0.456508,1.10385,0.115066,0.300001,0.35497,1.05527,1.88134,1.48237,1.01139,0.475785,0.727736,0.596462,0.354106,0.546641,1.84176,0.816464,1.60254,0.507931,2.49507,0.857198,0.415832,0.455644,0.93735,0.488969,0.57908,0.290467,1.47278,1.06466,0.791909,0.685546,0.284483,0.593295,0.448733,0.160658,0.413167,2.82591
}}

Latest revision as of 15:40, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr11:62352701..62352755,-p1@Cenpv
Mm9::chr15:36723899..36723909,-p5@Ywhaz
Mm9::chr16:65562883..65562892,-p2@Chmp2b
Mm9::chr17:66132446..66132517,+p2@Ppp4r1
Mm9::chr19:29038382..29038459,+p1@Ppapdc2
Mm9::chr1:174365430..174365443,+p@chr1:174365430..174365443
+
Mm9::chr2:28368763..28368843,+p2@Ralgds
Mm9::chr4:62141059..62141132,+p1@Bspry
Mm9::chr4:95633896..95634011,+p2@Hook1
Mm9::chr5:65928143..65928170,+p6@Ube2k
Mm9::chr7:91838355..91838409,-p2@Zfand6


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
intestinal epithelial cell5.06e-079
epithelial cell of alimentary canal5.06e-079


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.14.36585
MA0004.10.330313
MA0006.10.547312
MA0007.10.850001
MA0009.10.743257
MA0014.12.34863
MA0017.10.598706
MA0019.10.567591
MA0024.10.70077
MA0025.10.971686
MA0027.12.37948
MA0028.10.194782
MA0029.10.679737
MA0030.10.686088
MA0031.10.651724
MA0038.10.462726
MA0040.10.755433
MA0041.10.263922
MA0042.10.252679
MA0043.10.837621
MA0046.10.778239
MA0048.11.65044
MA0050.10.365212
MA0051.10.471092
MA0052.10.76328
MA0055.10.479469
MA0056.10
MA0057.10.406124
MA0058.10.246908
MA0059.10.257372
MA0060.11.28515
MA0061.10.147394
MA0063.10
MA0066.10.452472
MA0067.11.08124
MA0068.10.735122
MA0069.10.76361
MA0070.10.75417
MA0071.10.364454
MA0072.10.745922
MA0073.10.535798
MA0074.10.419185
MA0076.10.223625
MA0077.10.724865
MA0078.10.502121
MA0081.10.277253
MA0083.10.836845
MA0084.11.4063
MA0087.10.794721
MA0088.10.534411
MA0089.10
MA0090.10.299987
MA0091.10.906056
MA0092.10.300264
MA0093.10.20148
MA0095.10
MA0098.10
MA0100.10.408523
MA0101.10.73212
MA0103.11.16365
MA0105.10.556739
MA0106.11.26962
MA0107.10.211681
MA0108.20.589413
MA0109.10
MA0111.10.312463
MA0113.10.482899
MA0114.10.446898
MA0115.10.84036
MA0116.10.186271
MA0117.10.808813
MA0119.10.265536
MA0122.10.828211
MA0124.11.02871
MA0125.10.955734
MA0130.10
MA0131.10.563262
MA0132.10
MA0133.10
MA0135.10.873285
MA0136.10.437601
MA0139.11.67615
MA0140.10.408417
MA0141.10.233109
MA0142.10.63775
MA0143.11.24578
MA0144.10.147954
MA0145.11.75225
MA0146.15.90064
MA0147.10.475899
MA0148.10.344843
MA0149.10.269772
MA0062.20.968877
MA0035.20.412747
MA0039.23.42044
MA0138.20.555696
MA0002.20.343346
MA0137.20.230686
MA0104.20.744492
MA0047.20.46201
MA0112.20.9035
MA0065.20.033123
MA0150.10.849777
MA0151.10
MA0152.10.46211
MA0153.10.889592
MA0154.10.434137
MA0155.10.637282
MA0156.10.222905
MA0157.10.606944
MA0158.10
MA0159.10.957875
MA0160.10.347545
MA0161.10
MA0162.12.86908
MA0163.11.12282
MA0164.10.437937
MA0080.20.212408
MA0018.20.446948
MA0099.20.549696
MA0079.20.912106
MA0102.21.45844
MA0258.10.421574
MA0259.10.891672
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:656&oldid=3072655"