Coexpression cluster:C3609: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C3609_osteosarcoma_embryonic_Reticulocytes_testicular_chronic_Hep2_teratocarcinoma
|id=C3609
}}") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.0478539243503264,-0.0371620002429893,-0.0406256965439669,-0.206224771000402,-0.215177788383069,-0.0146249689055478,0.0619317915553357,0.0961474433046863,0.115592606313306,-0.324884915512462,-0.638470623036676,-0.3025229750678,-0.289465695979648,-0.0050983790606085,-0.200279152043734,-0.183279351491819,-0.094667450897748,0.0363011340550634,0.066379599705021,-0.364424886780861,-0.455353513434768,-0.575169059877824,0.0127962665782126,0.130801183084909,0.0382505104536379,0.085103017524304,0.109528483433388,0.100171236574709,0.0340901749113189,-0.00877856138657207,-0.0394817259435897,-0.203869128795524,-0.0572928259413923,-0.0801785224453176,0.109049329262674,0.147900283341336,0.190009928613838,0.0770341121633176,-0.039111900280062,0.0108819117630069,-0.123128712835281,-0.150215044656798,-0.146348071555984,-0.214406597407106,-0.0719068703672157,-0.166614474841745,-0.215189314727315,-0.0105205513832194,-0.0278791283196345,-0.102861535313541,-0.100382244734913,0.0187960719832663,-0.120537968559997,0.0440223451251962,0.103824240351205,-0.195242019374758,-0.156559744551141,-0.119982206543531,-0.261581885613202,-0.045007332249387,-0.11302335013074,-0.24353122120643,-0.108578829093766,-0.101651460700573,-0.190587939612832,-0.322396000432405,-0.197986212978683,-0.168274447713078,0.0177925382928674,-0.0183503886055694,-0.217990760200255,-0.10217374637963,-0.066682485412121,-0.0190183093626188,0.0396898800292365,-0.0551994236875687,0.00491548201765801,-0.0583883214867451,-0.000329277554058205,0.0759834982799632,0.0385289259516812,0.0439788371787302,-0.122219372986075,-0.076166816197013,0.0309916061990549,0.102913772189516,-0.0306924855251982,0.0584017019202694,-0.109077572471108,-0.0817522837422814,0.019998559751472,-0.145169281834952,-0.011051084015651,0.0936791655728055,0.186624674250267,0.0341148318699778,-0.132064509276177,-0.0335274328412822,-0.138259234947643,-0.104653456166592,-0.0016827949564886,-0.135459335553025,-0.0405007281331556,-0.0902840102378464,-0.179532637109593,-0.0648402382297695,-0.236168998708003,-0.213075874938454,-0.106553839896624,-0.157628797189832,-0.169927579620342,-0.152383901963393,-0.196051663110143,-0.132042562837432,-0.303436473987535,-0.0669534607175477,-0.0094005019416561,-0.0518817368001712,-0.235384502809849,-0.150340776071266,-0.0727615095353598,0.0400292250623138,-0.197921441105787,-0.249729071466605,-0.157754877218651,-0.159692237051215,-0.0203794452757207,-0.28265796772319,-0.0498394351509595,-0.10859099373374,-0.448326670066589,-0.137296390642673,0.00172229014802627,-0.0327375718145971,-0.0391232196553384,0.0870306545564508,-0.0289633517970898,-0.0408422108560018,0.0306743908628921,-0.0330502915582527,0.0211747257615236,0.116912487407415,-0.353333683114479,-0.305028344001559,-0.0902794211557731,-0.14614898562799,-0.0981438794471532,-0.172712192720399,-0.0632604085014266,-0.0401285623671195,0.152738030289304,-0.0203769266248515,-0.00198961699810241,0.0620025234028894,-0.141526891355972,-0.0245485958383251,0.040910589768036,0.0653276657963744,0.0219828684375236,0.0629495841492913,-0.146004953053492,0.0474516123733091,-0.151857277567141,0.0185732742347242,-0.314532940284777,0.100380424497,-0.0285848239552106,0.0108319415512491,0.131777168759271,0.108998298763141,0.0929774196741351,-0.220533543156089,-0.296416991440058,-0.51539401190834,-0.0243573377344188,0.125996683083602,-0.0461348757322694,-0.185096803527769,0.0980154251854406,0.0478047452536117,0.122304537779616,-0.0603605622847176,0.0093640148993206,-0.0693828787605921,0.0204133968252564,-0.317104246597494,-0.0667805256687872,-0.528235333183129,-0.0488122178685726,0.169557119546593,0.0513330667928336,0.114587531526073,0.139286951114322,0.0443814058067107,0.0620334405532059,0.100932003289449,-0.0530418907629858,0.0367144421843073,0.0322310417076956,-0.70357115992099,-0.801495100177266,0.205042923289231,0.154955551228959,0.103907655151361,-0.162930422089165,0.0734315137255621,0.043441350157734,0.155207274347682,-0.124741144906449,-0.00409933537097773,-0.0039951370291611,-0.040041670278641,-0.0378567187025649,-0.103334082722659,0.138678252172294,-0.110011672158607,0.0138014151013331,-0.120592583012505,0.0153305531001986,-0.0742360998059106,-0.149230765482013,0.0902200631988939,0.183691474766036,0.0587039400607692,0.00337680378325245,-0.0613661047009952,0.0579564953168044,0.0980647732454347,0.132104964145174,0.0684327887462894,0.0968148433721838,0.0924983879370991,-0.122197533018755,0.0348799421836803,-0.0499586890013392,-0.0637505236149425,-0.0698330776216761,0.41233473035966,0.367007724455882,0.394140450595988,0.385458203658767,0.385109249305111,0.340599576920593,0.426650175412998,0.391236108869192,0.407103965026714,-0.510776465257759,-0.603992690208208,-0.38516572990665,-0.46300162821463,-0.152322336789672,-0.103540891033896,-0.192866403800975,-0.189288586816625,0.0593361062950379,-0.0365928114958942,-0.113732330824251,0.146180089532686,0.078160110658054,0.139870128102045,-0.355427087968559,-0.508243213604237,-0.00475755488095531,-0.0807986209559921,0.0273260156534572,0.0388055096176125,0.0483908714981116,-0.0217546086347267,-0.0314608159108557,0.183731871600623,-0.0700582736933488,-0.0225941276074654,-0.0997015196332861,0.186164417948678,-0.0354874504679036,0.00325975188948369,0.237775898410819,0.156768305330519,-0.0127573109480099,0.243378589463241,-0.0343155964210803,-0.0453177105021663,-0.159894280288069,-0.0661192909007706,0.0823420370088495,-0.0229236504383226,0.0662088623803194,-0.00447314836735413,0.133744028754253,-0.0306684165042582,-0.172641221127257,-0.327030223226239,-0.113467075982097,0.225180350509564,0.0174824990461993,-0.231325402435827,0.0608952830475546,0.0523608752168587,-0.0484417157719205,-0.238199228047181,-0.400651381646553,-0.244070608649309,-0.00531934609328566,-0.214998486470475,-0.420603649231394,0.21156797319739,-0.0571050250008382,0.187510817964363,-0.15566774984613,0.00417427327035202,-0.0116181943527154,0.0353679361833938,-0.107884180864407,-0.119832508813626,0.126369391007754,0.155250514482735,0.0209691105055927,0.050171386429724,-0.0342588136396061,0.071342746493634,0.254175733701195,-0.0558783716197988,-0.0860734193087732,-0.0719775128598745,0.118985171276933,0.257349173950507,0.234066506058186,0.243606271025857,0.415972273874905,-0.383012682926838,-0.383492614389423,-0.273327158677623,0.00344465945439265,-0.0104369560401809,-0.044331924768884,0.0981346344324294,0.0272803870222518,0.0271618831515388,-0.0170224424451799,0.195585948314072,0.074497521379367,0.0702515937674206,0.22504233014938,0.169922127011055,0.126051338627461,-0.643025586533646,-0.584000820972313,-0.037345500464247,-0.0418540564790501,-0.0532476129536481,0.156577680154802,0.0229592393651905,-0.00193495887737072,0.101280851342102,-0.0155353936382074,0.071669826897266,0.0283363048276055,0.012408181939294,0.0492684035851727,-0.176731019928164,0.155807650250176,0.127062467752886,0.112192418473611,0.057820081255687,0.0610846842972843,0.122342970977498,-0.0168966695000312,0.00834394907540514,0.306243292199506,0.14775586926073,-0.0433116644756555,-0.525132996560148,0.0991010046635425,-0.325765902802824,-0.391046766138331,0.0245879640846707,-0.475402223128926,-0.40917893060161,-0.0187396357905805,-0.373497525159422,-0.481514056637862,-0.697452674053677,-0.349822332820319,-0.75517897845997,-0.401488976579023,0.165438369893484,0.138458052432012,0.0902067148436,-0.528274239188511,0.131238347215242,-0.104134895983063,0.107982143091919,0.186688476139698,-0.000652557655628216,0.0506427418723245,0.0701753975983259,0.126809516225359,-0.0108930621931767,0.0497560037963285,0.105355650551275,0.047785828137038,0.0334800496118088,0.165344184971237,0.167774575507144,0.14819819992565,0.0156064964190117,-0.181202269742359,0.00661707316707116,0.0832270728040736,-0.220764246255457,-0.0831625861239083,0.0417970074636986,0.0612219307128439,-0.126874447538019,0.109761092189891,0.115143233509088,0.113549273127617,0.0869926769012954,-0.0585778796988741,-0.580596999986791,-0.0782212685484164,0.0760833300732966,-0.0340590979724047,0.0701610676150743,0.0734964661336635,0.137656264091851,0.0366546431445907,0.000878878153295126,-0.115274282791958,-0.481558169180916,-0.0171303735126307,-0.279070787431528,0.00279974088253065,0.0583194259046218,0.072048418129621,-0.0431176657036647,-0.101866888116142,0.0159933122759717,-0.314471120120152,-0.0941753559035108,0.115028598009822,0.245753460536389,0.106056130062866,0.0908788390275124,0.0518895933123666,0.16586386176156,0.156836277342638,0.0119426906650761,-0.139211395580135,-0.304041727062298,-0.273658779781613,0.139718685726264,0.119966812952338,-0.0822587490997312,-0.160621051877533,-0.453837459637625,-0.660187324062537,-0.565468329231766,-0.0509293212583029,-0.313770808734791,-0.0478072957879638,-0.123803879137475,-0.0998181241631597,-0.0726195238292222,-0.0743794210260906,-0.216722631672599,-0.0337288841244827,0.0751160450718846,0.0793402259120135,0.237621839357474,-0.192075220008863,0.227404177604897,0.0724274913541305,0.253870695183109,-0.255213919410895,0.17928251039763,-0.219107710654529,-0.143262146397217,-0.244107571079313,0.0637280922168726,-0.120592882456909,-0.0874949834426577,0.0490136140983546,0.0755977381645894,0.131856478267544,0.063893954263609,-0.0187752527431244,-0.0707633989740002,-0.118395380203987,-0.0713392776084578,0.0799928449777809,0.243643552546235,0.0865392962670368,-0.0947015994742983,0.106738282469473,0.104520383018518,-0.0773808435843737,-0.13550844642236,-0.106494812277019,0.0897654322873829,0.0798710335075437,-0.0131837769530314,0.00694182651525543,-0.0618194222167546,0.0771565813304531,-0.0835814422282545,-0.0123910833943268,0.0446006624361344,-0.119314389698108,-0.116226570770428,-0.170015554955643,0.0265489553776659,0.195374737909386,0.0728593648024356,-0.0353644785658687,0.223686346159057,-0.0609511977423126,0.29259023013892,-0.0356675287637818,0.00657255444520954,0.010597194933842,0.0481856387588877,0.128854351643306,0.293317168647666,-0.0358803805808702,0.126504514798268,-0.101431625877048,0.0814062421823922,0.0680171837470762,0.00867287255771809,0.20490289060033,-0.0557562377831089,0.0859414753056016,0.11102041693121,-0.11590209836538,-0.13318292664119,-0.108182250899748,-0.00368930182736982,-0.0144503654335597,-0.0171249131826783,0.273113836439071,-0.0747879107539279,0.161919559138595,-0.202737215039857,0.00389543921825108,0.228059763083219,-0.07144087358762,0.00814703438302766,-0.144491074198809,0.269799812941505,-0.228050160191671,0.0157992741289794,-0.0466094725093166,-0.00864956860360078,0.0817845708230542,0.252725882388036,0.171414827828784,-0.083592464403879,-0.0894520171264763,0.119524988095078,0.0583739639486589,-0.384127261137799,-0.222960764202802,-0.205020684472778,0.12462829309426,0.0472336593378251,0.161004245013679,-0.0594105355071383,0.00868597980254271,-0.00996743932950983,0.0593839584242244,0.213698883017094,0.363484923439059,-0.0886144347882806,-0.067690457561503,-0.129503602896199,-0.0954508600607982,0.348497744142658,0.519824034065058,-0.0315658004065678,-0.0505808492362865,-0.0270972597381732,-0.105751236695587,0.0945051625123636,0.174147704894196,0.11671063748024,-0.0666749236128635,0.238919064695751,-0.0703192986522101,0.118993206833543,0.170105883448106,0.116738793934042,0.207296052590203,-0.0566029976607054,0.121903668887744,0.0545012392015058,0.12915513175424,0.296006109431585,0.0905208010554674,-0.0497672708076053,0.165904480499769,-0.262908080644833,0.102306304811966,-0.0487651672661171,0.177843254920306,-0.183962282134422,-0.236710529191727,-0.0267268801231253,0.0236210688708685,0.403950245380409,0.327091646538957,0.207675224977165,0.100575301825042,-0.186387986353121,-0.146630500315421,0.321383288867653,0.03574504871272,0.148548979207801,-0.0330091922073548,-0.075943222832575,-0.229905882605667,0.179061854955264,0.0159553991213719,0.0495677465315949,-0.029485114550784,0.0923640676921498,-0.231837216761839,-0.022140517363416,-0.0560292320152492,-0.072539438073632,0.176264240058516,0.210478723377183,-0.0935336642450568,-0.227197090261802,0.17198398542033,0.170808096047534,0.0555879021842083,0.015313426626013,-0.00565472969314906,0.0504996823293919,0.142822648631324,-0.0622452161483593,-0.116075147188275,0.0564393803719314,0.220540854046654,0.261732099905447,0.0237336835771413,0.126542481085396,0.0634013660108532,0.0760740622598177,0.069896563958817,0.195938789443949,0.280499351227328,0.0844501624462166,0.0520876699001569,0.181976302858051,-0.00808721710872518,-0.146776202821139,-0.144905119447702,-0.0733176294060458,0.0864476931415046,-0.00885199613336685,-0.103699419153839,-0.244642172720257,-0.239829767230476,-0.0581706442618726,0.117156437221317,0.0509588273460502,0.177511914830765,-0.055977216028365,-0.00584661827155519,0.000275152511392873,0.121585451496288,0.0525624223030901,0.0639709087546849,0.0379603797658539,-0.0947621312334015,-0.16659434265495,-0.0919420595588749,0.0425968784574866,-0.202709850064337,0.209115092107028,0.143385941464977,-0.074196470175035,0.0328359119839357,0.305125254049775,0.222058902595722,0.0175770878205137,0.00397521076396434,-0.00255848905054923,-0.0676348615108615,-0.136715553281539,-0.21587368870276,-0.0743630210086244,-0.0850920296090762,-0.0493142132992429,-0.0456980200783298,-0.0802141088420607,-0.0590131268710059,-0.0251799962041439,0.0216457140802926,-0.00486011279719945,0.0200650193581273,-0.242748327297544,0.00413576817200512,-0.00489779866954776,-0.103890479192511,-0.0512657784155304,-0.126813759037844,-0.105890547980589,0.235495200261191,0.0407658328831038,-0.028636409408113,-0.120768701918616,0.0535072658875477,0.124081363574909,-0.0234007641741247,0.122185459704746,0.262209130676901,0.210821218532351,0.225651841792202,0.0764338894149545,0.0094030101332545,0.386659346427923,0.212866581229082,0.117231879816969,0.0430353296243089,0.268844277670022,0.0100183251545884,-0.086304341765389,0.00529115746712927,-0.265816194983737,-0.113267500235526,0.376269840214682,0.0347440101159087,0.0360195163120647,-0.0128362914593168,0.215376110632507,-0.111506441879522,0.163612344878362,0.0544444330866809,0.0523696751865306,0.0910098855068835,0.160181237248608,0.103681141280828,-0.102422545672167,-0.159050542460383,0.353857677016161,-0.0369491488860298,0.0865929700390193,-0.0124534823530122,0.121419100354672,0.128620602320017,0.320866670250527,0.16129396344501,0.0155325847846588,0.056006647354653,0.0535321177273924,-0.116269877624406,0.0194570694768554,0.196332383092519,0.11873742933527,0.00301096828355174,0.0213531756410237,-0.105207146507929,0.148973455057422,0.233421362787036,0.196028365772633,0.127217510014593,0.275249896761401,1.18280256845614,-0.0300226216428827,-0.0183649093585982,0.0866942828566768,-0.110932135537634,0.304749667351092,-0.212934881825875,0.0740011816422477,0.0921846053064292,-0.186192765151451,0.069848390308843,0.132176750018961,0.0981133852433698,0.173651958883677,0.352874087331253,-0.0532859185044795,-0.429715492544562,-0.311902564761631,0.220122634314117,0.0483590660105591,0.0892369105948381,-0.154585357669726,-0.132070147802714,0.154554729474136,0.0915723832363864,-0.184809512350682,0.0288945615196248,-5.21792533620946e-05,0.017379531945845,-0.0966566129055952,-0.0985316075609257,0.192470692237529,-0.0761876330698965,-0.0703330299319946,0.0910522782891847,0.153210262504261,0.134807393089574,-0.197553849039282,-0.0660223816042018,-0.0158022976515115,-0.17212639805447,-0.118839828617285,0.139423538652757,0.175638728319659,-0.151550404382508,-0.0739145826805566,-0.199414332158939,-0.0639699686301844,-0.237316434726248,0.227316030419764,-0.110945108478653,0.282074348335302,0.393614344664574,0.120668651890781,-0.0415734933021387,0.212363379073193,-0.056133000796537,-0.10751682583474,0.192907103996023,0.355578716923836,-0.0451666419921534,-0.186139559635781,-0.174140606425794,-0.0638651588060486,-0.0379558359211426,0.239739267723366,-0.155839934870407,-0.134355629040207,0.0123532560317192,0.146294025341755,-0.117255543704657,-0.110195620259257,0.0387862984805429,0.348402908039301,-0.0103395512669309,0.046267791498136,-0.172998121660818,0.0447257175840472,-0.226470962426357,-0.0281678453077575,0.0565441055751743,0.0912255916324127,-0.121505267984821,-0.098381217339315,-0.0429215318375373,-0.0740309788459146,0.0890885884362242,0.43971999787499,0.0919551056794907,0.422944695748745,0.366789036745884,0.129372022196898,0.410619999826213,0.415782909959902,0.37742020221516,-0.0985312597423218,-0.172842298558747,0.1053133612768,-0.015872793131227,0.0744017698180224,-0.0151618363570143,0.380886242813488,-0.13001497334133,-0.100053387124531,0.106014289921805,0.223342225820913,-0.0256359481209297,-0.0418464034386753,-0.0333954258643049,0.113608311193261,-0.0894378257743103,0.00961161118024223,-0.139522150479472,0.0870128863088089,-0.163476095960649,-0.0199873805729266,-0.14005153789301,-0.123386026830445,-0.114742729786544|full_id=C3609_osteosarcoma_embryonic_Reticulocytes_testicular_chronic_Hep2_teratocarcinoma|id=C3609|ontology_enrichment_celltype=|ontology_enrichment_disease=DOID:14566!5.84e-18!239;DOID:162!1.05e-16!235;DOID:0050687!1.09e-11!143;DOID:305!9.24e-08!106|ontology_enrichment_uberon=UBERON:0001557!7.59e-08!19;UBERON:0001737!2.16e-07!9|tf_chipseq_enrich=BRCA1#672;3:20.1842306432238:0.000121570486027164:0.00164124870607432!CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0189802396312936!CEBPB#1051;3:7.97114762582482:0.00197418705528856:0.0115121229406634!CHD2#1106;3:10.3440228341169:0.000903370110274688:0.00659815867871726!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0324802193883825!E2F4#1874;3:12.6680603152844:0.000491798700629898:0.00436611394891924!E2F6#1876;3:5.01715573169739:0.0079176980688633:0.0321619722536663!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.0320147463884099!ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0461584340456674!ELK4#2005;3:16.235681658468:0.000233604395574599:0.00255550533878868!ETS1#2113;3:9.72876092220234:0.00108584009258484:0.00761356518492566!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.015392281587853!MAX#4149;3:6.45255550900712:0.00372191383426551:0.0186307974950563!MYC#4609;3:5.2222818716094:0.00702084375574015:0.0294123506219714!PAX5#5079;3:6.66956553117783:0.00337029099967726:0.017273878476483!POU2F2#5452;3:9.10612405774252:0.00132416519268213:0.00881305687984508!RFX5#5993;3:12.0479108271951:0.000571724605031258:0.00484111772538183!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.027626677412067!SP1#6667;3:5.6983813781409:0.00540396270171217:0.0246144385103632!TAF7#6879;3:11.4330694049239:0.000669018198194583:0.0054210250291911!TFAP2A#7020;3:16.518634373045:0.000221803388076634:0.00247938821013974!TFAP2C#7022;3:10.8092286098602:0.000791674657575313:0.00614825323932987!TRIM28#10155;3:18.5905250452625:0.000155596929725528:0.00196878940436205!USF1#7391;3:6.36149927720796:0.0038840405729056:0.0190042311264319!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0328863456596207!ZBTB33#10009;3:31.6647250299812:3.14815888737575e-05:0.00063362992106116!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.0109283050393866|tfbs_overrepresentation=0.147255,0.0586687,0.039404,0.0477154,0.199763,0.287811,0.000938367,0.414564,0.03272,0.0257057,0.139423,0.00229455,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.0236364,0.0907212,0.143747,0.0933697,0.204953,0.000270306,0.0180314,0.208242,0.0665252,0.0844722,0.113083,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.000323983,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.0212153,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,2.00605e-06,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.0085119,0.00166778,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.00033709,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.037005,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.00662754,0.0549274,0.0151713,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.0137227,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.000145025,0.0472272,0.263087,0.000830039,0.0249262,0.182472,0.0695582,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.21774,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.219944,0.131316,0.782949,0.268011,0.051522,0.517782,0.0853552,0.335423,0.261644,0.261553,0.446302,0.373681,0.309233,0.49143,0.0619618,0.395854,0.329568,0.53472,0.615744,0.271958,0.292154,0.405773,0.39729,0.217139,0.597171,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.0190732,0.376924,0.129235,0.0217334,0.0407001,0.520763,0.370782,0.415647,0.0297533,0.0352744,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.603208,0.283727,0.314747,0.21363,0.291709,0.448095,0.0563639,0.416816,0.292835,0.476744,0.439556,0.373868,0.57762,0.00280546,0.18237,0.126021,0.248484,0.400457,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.503058,0.513852,0.169228,0.248634,0.281576,0.0271848,0.163244,0.0670502,0.0730934,0.184794,0.0641718,0.176034,0.581837,0.0169683,0.0267008,0.188159,0.551561,0.448039,0.218623,0.312808,0.00142673,0.0451077,0.0747529,0.229003,0.00449125,0.223844,0.50215,0.294698,0.34331,0.138202,0.289204,0.0605279,0.109738,0.278044,0.00692297,0.428671,0.228096,0.336314,0.19763,0.15631,0.0530502,0.421464,0.48267,0.420626,0.516462,0.582303,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.127215,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.0460163,0.293698,0.284593,0.00911104,0.306556,0.305777,0.601433,0.00573447,0.169823,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.130283,0.166672,0.206222,0.525396,0.651524,0.113671,0.269226,0.339277,0.0479524,0.281425,0.141758,0.455379,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.0688327,0.539392,0.34988,0.475069,0.404569,0.6408,0.630264,0.0562865,0.0697683,0.0556835,0.00138994,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.116981,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.00427764,0.0627924,0.381386,0.0179103,0.303939,0.279795,1.33844e-05,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.00184145,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.0177068,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.0012141,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.0376172,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.0254773,0.019326,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.0178107,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.323837,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.739716,0.655293,0.21727,0.289306,0.119215,7.33943e-05,0.177967,0.00136406,0.057571,0.047591,0.392974,0.0608699,0.175319,0.0505407,0.0713214,0.0271723,0.291114,0.0355833,0.125606,0.175094,0.43617,0.519327,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.00171529,0.0755808,0.045654,0.110216,0.070276,0.0277579,0.0124298,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.00500888,0.000665506,0.00144552,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.0119616,0.0973823,0.15503,0.170295,0.193653,0.137219,0.0282663,0.0346616,0.288096,0.11903,0.00362128,0.331451,0.113145,0.112651,0.186638,0.01625,0.0948451,0.264079,0.0339656,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.0125264,0.166967,0.188651,0.0813902,0.184948,0.156261,0.0065917,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.42622,0.448797,0.197484,0.0919774,0.36145,0.0160226,0.0129,0.580441,0.643768,0.432035,0.138468,0.0886602,0.48809,0.50058,0.443185,0.522904,0.3468,0.60734,0.227104,0.518585,0.00310917,0.38649,0.284625,0.504757,0.04783,0.0437169,0.28907,0.164197,0.462688,0.287881,0.574635,0.478174,0.336276,0.0263888,0.258219,0.446557,0.243383,0.442897,0.390974,0.149257,0.109758,0.161598,0.164332,0.644754,0.496032,0.21803,0.37357,0.200632,0.477353,0.78384,0.160298,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.194707,0.616388,0.408413,0.516511,0.322213,0.656109,0.0655189,0.61031,0.387276,0.169614,0.221908,0.537348,0.222037,0.416621,0.416292,0.0252635,0.148994,0.579431,0.00169113,0.122646,0.138871,0.308032,0.166905,0.19783,0.0833851,0.00691922,0.140384,0.175199,0.332919,0.373557,0.523625,0.408861,0.365487,0.534741,0.39088,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.303709,0.0323359,0.386538,0.508064,0.250964,0.00154968,0.457886,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.0663581,0.0529819,0.127092,0.283463,0.563586,0.135386,0.399569,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.24107,0.387069,0.332774,0.52832,0.299887,0.0814305,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.00129444,0.0719199,0.264884,0.162568,0.19104,0.163057,0.0260582,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.0171537,0.193601,0.0264253,0.222977,0.0664606,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.0233967,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.00221189,0.172134,0.176789,0.0969345,0.202137,0.310405,0.0437875,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.00132285,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.0136582,0.206239,0.0015491,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.0232618,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,1.23863,0.491742,0.221898,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.242883,0.845342,0.635379,0.743951,1.00973,1.05396,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,0.599922,0.427404,1.45286,0.855276,0.567465,0.469078,0.598234,0.777097,0.259059,0.63803,2.07812,0.726632,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.893117,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,2.20718,1.11026,1.54311,1.91674,1.2037,1.75271,1.7986,1.25415,0.333216,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,0.977977,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,1.7605,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,0.553386,0.794219,1.10778,1.35006,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,1.73097,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,0.698641,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,1.76124,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,2.15653,0.0768232|tfbs_overrepresentation_jaspar=MA0003.1;0.708947,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;1.24048,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;2.72668,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;1.58389,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.0185922,MA0074.1;0.935474,MA0076.1;2.91768,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;1.70054,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.715722,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.273764,MA0146.1;0.107247,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;2.96208,MA0035.2;0.894194,MA0039.2;0.0526989,MA0138.2;1.04628,MA0002.2;1.20011,MA0137.2;0.666381,MA0104.2;0.491226,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;2.08673,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.256269,MA0156.1;1.60572,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.149099,MA0163.1;0.387745,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;2.26143,MA0099.2;0.902716,MA0079.2;0.0373086,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0}} | ||
|full_id=C3609_osteosarcoma_embryonic_Reticulocytes_testicular_chronic_Hep2_teratocarcinoma | |||
|id=C3609 | |||
}} |
Latest revision as of 12:29, 17 September 2013
Full id: C3609_osteosarcoma_embryonic_Reticulocytes_testicular_chronic_Hep2_teratocarcinoma
Phase1 CAGE Peaks
Hg19::chr17:17184546..17184569,- | p1@COPS3 |
Hg19::chr17:17184575..17184592,- | p2@COPS3 |
Hg19::chr17:17184605..17184622,- | p3@COPS3 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 7.59e-08 | 19 |
larynx | 2.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.84e-18 | 239 |
cancer | 1.05e-16 | 235 |
cell type cancer | 1.09e-11 | 143 |
carcinoma | 9.24e-08 | 106 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.708947 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 1.24048 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 2.72668 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 1.58389 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.341392 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.190716 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.0185922 |
MA0074.1 | 0.935474 |
MA0076.1 | 2.91768 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 1.70054 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.715722 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.273764 |
MA0146.1 | 0.107247 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 2.96208 |
MA0035.2 | 0.894194 |
MA0039.2 | 0.0526989 |
MA0138.2 | 1.04628 |
MA0002.2 | 1.20011 |
MA0137.2 | 0.666381 |
MA0104.2 | 0.491226 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 2.08673 |
MA0153.1 | 1.43021 |
MA0154.1 | 0.312019 |
MA0155.1 | 0.256269 |
MA0156.1 | 1.60572 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.149099 |
MA0163.1 | 0.387745 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 2.26143 |
MA0099.2 | 0.902716 |
MA0079.2 | 0.0373086 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 1.40979 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
BRCA1#672 | 3 | 20.1842306432238 | 0.000121570486027164 | 0.00164124870607432 |
CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.0189802396312936 |
CEBPB#1051 | 3 | 7.97114762582482 | 0.00197418705528856 | 0.0115121229406634 |
CHD2#1106 | 3 | 10.3440228341169 | 0.000903370110274688 | 0.00659815867871726 |
E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0324802193883825 |
E2F4#1874 | 3 | 12.6680603152844 | 0.000491798700629898 | 0.00436611394891924 |
E2F6#1876 | 3 | 5.01715573169739 | 0.0079176980688633 | 0.0321619722536663 |
EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.0320147463884099 |
ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0461584340456674 |
ELK4#2005 | 3 | 16.235681658468 | 0.000233604395574599 | 0.00255550533878868 |
ETS1#2113 | 3 | 9.72876092220234 | 0.00108584009258484 | 0.00761356518492566 |
GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.015392281587853 |
MAX#4149 | 3 | 6.45255550900712 | 0.00372191383426551 | 0.0186307974950563 |
MYC#4609 | 3 | 5.2222818716094 | 0.00702084375574015 | 0.0294123506219714 |
PAX5#5079 | 3 | 6.66956553117783 | 0.00337029099967726 | 0.017273878476483 |
POU2F2#5452 | 3 | 9.10612405774252 | 0.00132416519268213 | 0.00881305687984508 |
RFX5#5993 | 3 | 12.0479108271951 | 0.000571724605031258 | 0.00484111772538183 |
SIN3A#25942 | 3 | 5.40888472681514 | 0.00631896197799152 | 0.027626677412067 |
SP1#6667 | 3 | 5.6983813781409 | 0.00540396270171217 | 0.0246144385103632 |
TAF7#6879 | 3 | 11.4330694049239 | 0.000669018198194583 | 0.0054210250291911 |
TFAP2A#7020 | 3 | 16.518634373045 | 0.000221803388076634 | 0.00247938821013974 |
TFAP2C#7022 | 3 | 10.8092286098602 | 0.000791674657575313 | 0.00614825323932987 |
TRIM28#10155 | 3 | 18.5905250452625 | 0.000155596929725528 | 0.00196878940436205 |
USF1#7391 | 3 | 6.36149927720796 | 0.0038840405729056 | 0.0190042311264319 |
YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0328863456596207 |
ZBTB33#10009 | 3 | 31.6647250299812 | 3.14815888737575e-05 | 0.00063362992106116 |
ZNF263#10127 | 3 | 8.22184163701068 | 0.00179904392556587 | 0.0109283050393866 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.