Coexpression cluster:C2390: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.0574609852176895,0.0554578800798736,0.0161597558432984,-0.11086267753924,-0.0492914736730234,0.0527644028547778,0.253126540767725,0.0256682876750127,-0.11086267753924,0.329437066660214,0.644471958394153,0.108608294870051,0.241053715950174,0.0262695004144031,0.013445019054174,-0.0191534423419101,-0.0819398021504046,-0.0545606323113167,0.10791882909652,0.285396448344512,0.509766050839106,0.304188837885484,-0.0317243289522873,0.194458809172376,0.231529859395862,-0.146408123160929,-0.0618783146984293,-0.102137476116781,-0.657807409772964,-0.657807409772964,-0.585969683764589,0.274778128982879,0.401763398670665,0.274576854525842,-0.41834000418723,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.612426448746624,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.432975777746886,-0.657807409772964,-0.598103182062639,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.576920167700294,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.634870170473709,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.642256090237664,-0.635748549203244,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,0.0875774411226333,0.000586670504397799,0.111084681284613,-0.0516039203081378,-0.0447574736238761,0.0923748881269025,-0.0763583124846893,0.111869752083894,0.194778937001752,0.311089700972594,0.386601421962034,0.230565418347358,0.0925967079093669,0.136744406646772,-0.16691866599317,-0.124829330515303,-0.106842944782134,-0.657807409772964,-0.657807409772964,-0.657807409772964,0.577993085451952,0.539495625043026,0.956811936116852,0.573502725335302,0.724244338347791,0.876471491756035,0.711875975527067,0.823291508636593,0.814334834217194,0.892551072246701,0.563910687546372,0.717752767113876,0.745512711117214,0.641021453890773,0.732428414352491,0.678839653700372,0.660761339842834,0.65898448693712,0.876770412194033,0.945946848432216,0.847494123947345,-0.657807409772964,-0.657807409772964,0.106096068933823,0.151902637202728,0.146840365299983,-0.0185685267773874,-0.11086267753924,0.0306222260811271,0.200025963449492,0.379937651457399,0.39834285129595,0.100730885607906,0.0991936342306524,0.0646131825467164,0.296803084107632,0.248570564472053,0.165238106876372,0.0122629903196685,0.227343581009291,-0.0197055597920953,-0.0409411962525818,-0.0499603653920174,0.0489671755798943,0.101244727737659,0.130506889311563,-0.0487198545844297,0.279436301073411,0.25694984057693,0.529830662637679,0.551381356743738,0.0669446635142455,0.0594692657055474,0.214996387975981,0.327024857085617,0.323808678968943,0.288709980558746,0.0604498783479605,0.296367098018341,0.180971966493695,0.153099573821852,0.150312902906674,0.137419722943933,0.222763716693911,0.150981860799463,0.265071348537287,0.120461629318277,0.282864289395319,0.093753833355457,-0.11086267753924,0.381878144374912,0.276613495552017,0.33488187680164,0.15588762962195,0.112532745602431,0.278307582730675,0.0107138666051912,-0.0936584635273362,-0.062939454089793,-0.0234012683460481,-0.0276601811269497,-0.264798070050126,0.404090330868187,0.388106521636072,0.443832421320369,0.082895507307344,-0.134328749238049,-0.096290973007623,-0.18356211394819,-0.295520378843226,-0.133525447285112,-0.0680605273796039,-0.123212856433488,-0.126565178583665,-0.19935655104815,-0.180759313508288,0.620179532259278,0.778161911211396,0.495783751575072,0.620840215192948,-0.11086267753924,0.00432506072327305,-0.124938805157964,-0.657807409772964,0.0408410730365188,0.33137123075613,0.0850541712713519,0.272703230886496,-0.0166699819085364,0.0921138180629789,0.320518841537061,0.135554375679736,0.519875257133482,0.0641243060783121,0.26010661597516,0.522823198658133,0.402245593679298,0.367721091614596,0.127722295664102,0.236776654768355,-0.610010573065509,-0.0151409345691229,-0.213274571980921,-0.0324016275719719,-0.0598123701225428,-0.00723889102378109,-0.0750842187360514,0.0572613639482051,0.342644865924688,0.556391957443691,0.114793650393101,-0.179934565360316,-0.220699964159172,-0.352968006038066,-0.120962429177864,-0.0406104746660328,0.0575846751906503,0.368210939162655,-0.0772312050394637,-0.138868745354161,-0.11086267753924,0.440585884311406,0.265307099603926,0.364767209157153,0.101219974343637,0.264194499364595,0.251346074388309,0.452544970975284,0.417251822377881,0.478780062075929,0.207896813858536,0.613626426943238,0.181055085990509,0.153828793206485,0.392327107060838,0.0200484334774338,0.112753413374763,0.108445757720105,0.19201917281863,0.137680683646481,0.363225012813654,-0.657807409772964,-0.517802149529495,-0.411543193438473,0.295655396548635,0.103811794904247,0.209751747217308,-0.0262801961241016,0.212946841109946,0.0712166414986485,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,0.204490230925916,0.002912407554981,-0.0116824094969013,-0.102776004057631,-0.108861452357001,-0.657807409772964,-0.657807409772964,-0.657807409772964,0.0234935209159842,0.0881517560644183,0.109757712833649,0.413262935093806,0.304659103310601,0.153046513010928,0.493384325423787,0.0386659136650832,0.183872269495205,0.0599330939608388,0.328000399807062,0.429630896415613,0.040812888665952,0.478398092504921,0.373136050577016,-0.657807409772964,-0.626390971373934,-0.657807409772964,0.164487237247138,0.0424621753201643,0.311943528771069,-0.00216123037134775,0.165934266080142,0.0860849886510245,-0.0613197487145981,0.10233059525127,0.0673118038723894,-0.0184580119805882,0.0798754910793548,0.0745820982786161,-0.036171037739325,-0.0602373743137913,0.156069026443307,0.00905357716372403,0.300326537781607,0.0793997453108173,0.0641352190968131,0.201660172150022,0.0872025247853579,0.21620590405609,0.0968465525945481,0.819486683164415,0.330283705844642,0.170825062594695,0.741053524706297,0.812847200393946,0.505397212695516,1.09892425691036,0.545766065445553,0.511012251617887,0.131491168212848,0.201740678633364,0.478314416085441,-0.589848801315374,-0.618374200186279,0.417531689247104,0.446553388451637,0.361383495916835,0.0676381713867412,0.0771124593285828,-0.0396152590306211,0.573673027029872,0.278500138180532,-0.11086267753924,-0.0566223119394037,0.155080453551078,0.0159429447450345,0.110952086209809,-0.0805847674766847,-0.0264159982391726,0.151742547383209,0.14344237644198,0.155553896859131,0.320904977158889,0.220508174253094,0.330900481038517,0.141584496032487,0.0080010961600028,0.278549808538292,0.280492611105118,0.332650344701283,0.109531305678366,0.148977275711242,-0.0392469272934022,0.206253566212344,0.108201510532357,0.212342742721245,0.388747701118564,-0.0616846851435989,-0.0039170801403024,0.219908067013602,0.0438608608313667,0.142561640047527,0.186535645269047,0.292032937275671,0.399738117381071,0.0259219657513491,0.501271094776782,0.21167074562356,-0.0867872719987272,0.0820186259339744,0.0904536228376888,0.0329429049358839,0.0170808725423584,0.190101448580358,0.278487008742103,0.167759565451071,-0.00134631266081055,0.223657588100498,0.351636206446337,0.319816832772561,0.29919987735763,0.300781727627044,0.226459862199938,0.202237576419106,-0.0692713064885395,-0.0977852778261736,0.330434019762408,0.504082501685362,0.106817684172052,0.33751103561513,0.300161797507665,0.0619372576337296,0.328841848716021,0.117579838794316,0.275718348879158,0.178686772815239,-0.657807409772964,-0.657807409772964,-0.57090569318794,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,0.304839009343829,-0.176266037269567,-0.0156792977568288,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.337785505733288,-0.657807409772964,-0.627113896559069,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.657807409772964,-0.149470261698854,-0.657807409772964,-0.408604892970607,-0.484008018670465,-0.326494868943637,-0.657807409772964,-0.183350166598328,-0.145603208995425,-0.657807409772964,-0.657807409772964,-0.477809904025901,-0.11086267753924,0.0846986933630577,-0.130109180719506,-0.657807409772964,0.0042410900291185,0.309134283991787,0.0950338289827236,0.290043253017137,0.036867368587408,0.0777242228216954,-0.0879453194166507,-0.369604643747863,-0.143684476799648,0.452536988287977,-0.269707135973862,-0.21882670223552,0.180724797577189,-0.357171475450748,0.0688530997753632,-0.0392965413978869,0.0728633385762498,-0.657807409772964,0.145012384286528,-0.657807409772964,0.26704746527346,0.0256134609212393,0.15846141722801,-0.0870462461167842,0.0304402819708759,-0.073719808433717,0.0568286208928574,0.0158562789620385,-0.0470054203294649,-0.0187080080380256,-0.160407016014003,-0.462514432705346,-0.0588355802577073,-0.130924354399395,0.0935138249360795,0.234922889048133,0.302215691880862,0.159431738397753,-0.107473977686089,-0.29778566852744,-0.0291106673662388,0.106158149527233,0.00503255265327315,-0.0285185742885596,-0.0997250943668704,-0.0660692457103866,0.137613838035128,0.457031722202007,0.0524761310700068,-0.657807409772964,-0.228595132661998,-0.547120281368708,-0.185881951566058,-0.237349385122529,-0.211467825807273,-0.141756134614098,-0.204620259315676,0.11398717765767,-0.078029356210943,-0.0821526716070611,-0.180532284267357,-0.11086267753924,0.104223686464815,0.0485185883550601,-0.312848471757028,-0.358656541584133,-0.288855074759783,0.260703291423711,-0.0477728295542335,0.0416719954779829,-0.563011113871636,-0.0582781368702132,0.107627936678013,-0.0511650045196267,-0.0807846990970762,-0.116904243812363,0.0489103548977519,-0.0568441242660215,-0.207141665599638,0.12267969660738,0.250917315571251,0.357119256093578,0.3938869983835,-0.132586862124267,0.0103510163594385,-0.0689467351081107,-0.000184974724319151,0.11638486956566,-0.0115815064683195,-0.0764014596063304,-0.120108581520508,-0.17384347564269,-0.0320513372512213,-0.0441008823647363,0.665937650064443,-0.0033997472715627,0.0099348838318415,0.0633382454306207,0.0713731305964092,-0.125916003820644,-0.0845619102063837,0.192610856263865,-0.188780058382551,-0.0266440868510864,-0.227878523094678,-0.220990488829645,-0.0524158507274141,-0.0854307396790522,0.32118494339351,0.192237106806088,0.199799102407594,0.0292135706832157,-0.019259064883009,0.0308361406677495,0.219836716361393,-0.657807409772964,0.284201816216222,-0.657807409772964,-0.0145002454222849,0.145887136349066,0.432481127887132,0.0248832790757824,0.0388989846017101,0.00927216846013302,0.171644820886437,0.415474064882065,-0.0371926184053224,0.134610308386006,0.157931742882013,0.134155188123263,-0.0035725734689589,-0.0755637148776419,-0.113033564313682,0.150215799808895,-0.0503280591041064,-0.00532562756639,-0.0789594338540358,-0.657807409772964,-0.408145742224461,0.0826918916558513,0.214344150285852,0.183245350264415,0.37573349033733,0.0304309926785217,-0.354193339310666,0.0833782192946939,-0.123335639006032,0.0270860789317373,-0.127457402914587,0.357051344109213,0.193995805875961,0.195066450163592,-0.122313725368946,-0.280661010910386,0.0924740927015449,0.335401540740592,0.0280978946246943,-0.11086267753924,0.183284708910815,0.123617401461631,-0.0126637692611354,-0.0393075550250317,0.143490692903088,0.054438696222795,-0.0988172237450332,-0.281123106244086,-0.542326038664485,-0.346577930529736,0.192698365786828,-0.16432564173683,-0.0584259890490549,-0.0966368253930378,-0.284093083091026,-0.284052464090786,-0.110407587376094,-0.051250921978263,0.131130726381591,0.0434717336243624,0.135289998781024,0.153464757037319,-0.162188998267976,0.231294022303229,-0.122171313657268,-0.180854404634259,0.0763410696443672,0.0326651139205509,-0.18891461993063,0.0113258932369801,0.024659433412482,-0.0981835225562541,-0.00344657782149795,0.20363523113742,-0.00358708396114485,-0.0812389326315405,0.0921619877708051,-0.0699417987000984,-0.0557918969294774,0.147849482022942,0.0844439251114125,0.150941239615833,-0.0642333440147423,0.214327693783424,0.354429948563873,0.483302390929195,0.547110756808652,0.0537553894408522,0.220691266944382,0.219394334479931,0.142484266255385,0.460341236017164,0.171291558857972,0.159169284097885,0.148400179503706,0.449865052014823,0.0936521373851722,0.427097434817442,0.454309986988334,0.0955306246012733,0.180971274911411,0.173404136760431,-0.0360240826679792,0.239357618514816,0.200527293570333,0.252319186346105,0.354933566969742,0.262630029494003,0.132191454572304,0.107987854799056,0.16497249698627,0.128062646018641,-0.630148148810899,-0.558187752011578,-0.582112146561899,-0.0023027600452344,0.0318225714043728,0.0769471106157372,-0.629218374029559,-0.399651221498715,-0.414480277599417,0.0136810419811782,-0.131077389575142,-0.0289654962533836,0.169699468798362,-0.212362226526316,-0.163665983579948,-0.375266145655514,-0.11086267753924,-0.254834709586622,-0.43741951636905,-0.413950004005037,0.0718623041987027,0.188697196272071,-0.657807409772964,-0.402957929590045,0.205402468962904,0.201210568163151,0.14079279511976,-0.256813380469868,0.165733718388041,-0.0178006183031883,-0.107379312819438,0.169810116838106,0.00742178962985811,0.056579498991576,0.117092917645726,-0.108654339998319,-0.0742916474643477,0.153108322474692,0.197738307075314,0.191481063267922,0.0290342959083653,-0.0509360978922456,-0.0987730137487465,-0.0993007084630406,-0.11086267753924,0.0600722592357004,0.0890407898833455,0.0759065045010615,-0.116628528345706,0.0819019300944235,0.0992889241872504,-0.167993977910121,-0.11086267753924,0.0600305743211195,-0.154735454920467,0.062115966539017,0.317890279149835,0.379936825922869,-0.105103987995103,-0.136773046219153,0.298377175794041,-0.270667080694812,-0.035715497334005,0.0377973480519874,0.113691329277517,-0.0267944221819154,-0.0977958197007266,-0.0106537749957597,0.0730430120293918,-0.11086267753924,0.195547499010253,-0.0212253193446527,-0.177767644024069,0.084937377172183,-0.231897780803204,-0.321407257264402,-0.231261829214958,-0.0131674472346878,0.0961241709742035,-0.0684349211329188,0.0394749931624434,0.0239468744693783,-0.0320426126465019,0.0022606149011525,-0.11086267753924,-0.0424830382672296,0.0475660899653539,-0.0285186896523936,0.114989849467018,-0.0919333922106023,0.109615048893868,-0.0252440492585923,0.196457441596175,-0.11086267753924,-0.11086267753924,-0.164876933309776,-0.242526788545512,-0.247076594369518,-0.40127045067975,-0.344557189035447,-0.249774305588201,0.13458120618193,-0.0109484184523339,-0.32988747238118,-0.0671980229233145,-0.118021155034533,0.12636855153344,0.0020928352029448,0.173331614161733,0.265211784818174,0.0885719276988716,0.342045498905687,-0.657807409772964,-0.0730226069675464,-0.0294132736770665,0.0451409247641935,0.252341875651796,0.0305003166198759,0.254055306736559,-0.235403636522685,0.191200911760219,-0.145160311770957,-0.0754967139468979,-0.0421864103329612,-0.0283629071091454,0.107063453677976,0.142606899437837,-0.208724348847863,0.0699600164046624,-0.0705534633361662,-0.178783272059893,-0.146474991939675,-0.185188418683639,0.192654272052636,0.201833920556791,0.315741123732253,0.300761870371693,-0.0733830774749759,0.0022280783306803,-0.514692897740897,-0.24912101535133,0.0150723555578517,-0.0974638854706827,0.0108828987215917,0.0397431086630511,-0.11086267753924,-0.0949612880390703,0.135458670322483,0.157668256476922,-0.0326604491502479,0.03231545853082,-0.0574458907757942,0.220228820894713,0.101296506655054,0.00170525144565055,0.132969564044458,0.0205548261145959,-0.0163016060156353,-0.199205794811339|full_id=C2390_Renal_Endothelial_Alveolar_Hepatic_Mesenchymal_Sebocyte_mesothelioma|id=C2390|ontology_enrichment_celltype=CL:0002321!2.10e-25!250;CL:0000222!5.70e-24!121;CL:0000213!3.70e-18!58;CL:0000215!3.70e-18!58;CL:0000115!1.19e-17!36;CL:0002078!5.39e-17!45;CL:0002139!1.20e-16!24;CL:0000066!1.37e-13!253;CL:0000071!4.30e-13!18;CL:0002546!4.30e-13!18;CL:0000076!1.31e-11!63;CL:1000449!8.94e-08!15;CL:0000057!1.20e-07!76;CL:0000183!1.27e-07!59;CL:1000413!2.78e-07!9|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000119!7.20e-28!309;UBERON:0000483!1.24e-26!306;UBERON:0000477!1.60e-24!373;UBERON:0004111!2.34e-23!240;UBERON:0002049!1.79e-22!78;UBERON:0007798!1.79e-22!78;UBERON:0000468!2.61e-20!656;UBERON:0000025!6.03e-20!192;UBERON:0003914!9.82e-19!117;UBERON:0000467!3.30e-18!624;UBERON:0000481!5.30e-18!342;UBERON:0000480!6.20e-18!625;UBERON:0000055!6.44e-18!68;UBERON:0000475!3.99e-16!264;UBERON:0007500!2.18e-14!59;UBERON:0001981!2.18e-14!59;UBERON:0004537!2.18e-14!59;UBERON:0006965!2.18e-14!59;UBERON:0004872!4.55e-14!83;UBERON:0000490!1.98e-13!148;UBERON:0004638!4.30e-13!18;UBERON:0001986!4.30e-13!18;UBERON:0004852!4.30e-13!18;UBERON:0002100!1.44e-12!199;UBERON:0004535!3.38e-12!109;UBERON:0001009!5.04e-12!112;UBERON:0003104!7.10e-12!160;UBERON:0009142!7.10e-12!160;UBERON:0000487!2.59e-11!22;UBERON:0000922!1.70e-10!592;UBERON:0000064!2.72e-10!218;UBERON:0005256!8.29e-10!122;UBERON:0005423!1.01e-09!581;UBERON:0010314!1.34e-09!132;UBERON:0007503!2.08e-09!78;UBERON:0004121!2.55e-09!171;UBERON:0000924!2.55e-09!171;UBERON:0006601!2.55e-09!171;UBERON:0006914!3.59e-09!25;UBERON:0010371!1.72e-08!104;UBERON:0002050!4.71e-08!564;UBERON:0000923!4.99e-08!560;UBERON:0010316!4.99e-08!560;UBERON:0005291!4.99e-08!560;UBERON:0006598!4.99e-08!560;UBERON:0010317!4.99e-08!560;UBERON:0002532!4.99e-08!560;UBERON:0001637!8.09e-08!42;UBERON:0003509!8.09e-08!42;UBERON:0004572!8.09e-08!42;UBERON:0004211!8.94e-08!15;UBERON:0009773!8.94e-08!15;UBERON:0001231!8.94e-08!15;UBERON:0001285!8.94e-08!15;UBERON:0007684!8.94e-08!15;UBERON:0004208!8.94e-08!15;UBERON:0003075!1.51e-07!82;UBERON:0007284!1.51e-07!82;UBERON:0000353!2.00e-07!15;UBERON:0006555!2.44e-07!16;UBERON:0004819!2.44e-07!16;UBERON:0003915!2.78e-07!9;UBERON:0004700!2.78e-07!9;UBERON:0001917!2.78e-07!9;UBERON:0000486!4.55e-07!83;UBERON:0007524!9.14e-07!73|tf_chipseq_enrich=CCNT2#905;3:4.75215118272197:0.0138620699668949:0.048717593474191!E2F4#1874;3:9.50104523646333:0.00185075103472827:0.0109265453542106!ETS1#2113;4:9.72876092220234:0.000111595531741814:0.00154492652963723!FOXA1#3169;3:8.31106481203909:0.00274013818210985:0.0150350578754529!HEY1#23462;4:4.04011104310571:0.0037530463691798:0.0185879646109342!MYC#4609;4:5.2222818716094:0.00134430939527274:0.00887081120445374!NFYB#4801;3:12.5698449401523:0.00081145639769735:0.00618731800533793!POU2F2#5452;3:6.82959304330689:0.00486047377520374:0.0227562209444794!TAF1#6872;4:3.34304628574529:0.00800566489870165:0.0321912615545182!TBP#6908;4:3.70677068709639:0.00529637781478435:0.0243957132662196!YY1#7528;4:4.91117074985386:0.0017187183805544:0.0106750656524961!ZNF143#7702;3:10.1256574141709:0.00153486161068818:0.00976542258657711|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.0110447,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.00526413,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.00723919,0.0848546,0.268505,0.713984,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.690341,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,0.0665478,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.202544,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.810881,0.603871,0.73998,0.668426,0.672445,0.376043,0.420045,0.73391,0.332539,0.545329,0.464128,0.389374,0.594055,0.414547,0.489273,0.413223,0.639461,0.137229,0.34505,0.369161,0.500422,0.49089,0.323639,0.702495,0.241524,0.45167,0.234628,0.520726,0.143893,0.41477,0.279946,0.524104,0.467825,0.563725,0.751064,0.632838,0.624969,0.460819,0.161502,0.586668,0.322903,0.350886,0.380582,0.583749,0.398372,0.286293,0.0683688,0.708425,0.359128,0.395864,0.683133,0.368633,0.188516,0.682118,0.512763,0.369971,0.578349,0.537928,0.464342,0.683088,0.714007,0.235444,0.804772,0.199727,0.279301,0.349116,0.302142,0.239545,0.432689,0.640367,0.343881,0.377117,0.606382,0.617741,0.626346,0.316925,0.356561,0.573659,0.211506,0.0883859,0.0962508,0.238465,0.70198,0.853221,0.6873,0.508325,0.773224,0.651927,0.656755,0.188468,0.280307,0.393583,0.794849,0.0596868,0.0984075,0.293026,0.753513,0.694744,0.605423,0.372182,0.429205,0.578951,0.0769243,0.41035,0.784024,0.35234,0.644643,0.525923,0.291917,0.421082,0.25441,0.202782,0.672876,0.517933,0.584705,0.517001,0.0746589,0.12395,0.419676,0.188259,0.189182,0.477589,0.0260996,0.546448,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.651295,0.370995,0.360161,0.429696,0.386216,0.385297,0.126311,0.606408,0.627185,0.360203,0.333725,0.447838,0.289666,0.500627,0.513045,0.452694,0.565545,0.845507,0.265037,0.629795,0.754776,0.53531,0.341771,0.424526,0.657528,0.356381,0.184395,0.0094773,0.624689,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.433821,0.64428,0.436806,0.576549,0.499072,0.744662,0.149061,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.0442046,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.0323461,0.0637178,0.257309,0.0334797,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.0173365,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.112715,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.287316,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.0109447,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.00167639,0.0757944,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.0721023,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.000340549,0.187329,0.0451012,0.0976639,0.351199,0.0102393,0.758305,0.278645,0.365775,0.155708,0.248017,0.22995,0.285695,0.0760151,0.0629459,0.0300882,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,0.22476,7.44804e-06,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.00140087,5.55479e-05,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.243266,0.107021,0.238657,0.20272,0.0896967,0.0164195,0.0780061,0.315336,0.028874,0.279823,0.295555,0.000772604,0.0103352,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.000106434,0.459091,0.54832,0.154964,0.296013,0.649813,0.537932,0.459994,0.523209,0.548059,0.25423,0.146971,0.45013,0.500698,0.472542,0.685908,0.747471,0.529642,0.509113,0.483077,0.0131065,0.23695,0.541914,0.627201,0.00784768,0.00709718,0.290703,0.0757071,0.722684,0.478691,0.360199,0.0690757,0.657141,0.824761,0.365494,0.212703,0.201391,0.364079,0.680099,0.579886,0.421038,0.569409,0.328518,0.545608,0.310552,0.594773,0.483764,0.829658,0.784052,0.209437,0.843495,0.401218,0.598945,0.882403,0.464001,0.60737,0.214786,0.00125006,0.839946,0.315519,0.261575,0.257956,0.264245,0.379063,0.326516,0.16985,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.212239,0.294954,0.156999,0.35974,0.025886,0.39549,0.234254,0.357409,0.86719,0.721266,0.50338,0.620526,0.404625,0.759068,0.424691,0.357704,0.479581,0.62689,0.172925,0.642173,0.284496,0.512545,0.512178,0.563206,0.829402,0.00663196,0.263302,0.552023,0.180735,0.775168,0.216102,0.254659,0.109605,0.397869,0.582542,0.226491,0.417131,0.463987,0.260097,0.503881,0.454761,0.639483,0.483658,0.452129,0.301581,0.261657,0.0686105,0.466529,0.545655,0.438176,0.349112,0.741477,0.385425,0.307816,0.461541,0.386339,0.382854,0.598787,0.478745,0.611661,0.319747,0.475047,0.557967,0.608127,0.282281,0.612712,0.0352827,0.246827,0.202347,0.70712,0.387134,0.559969,0.358813,0.100705,0.574252,0.493455,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.42505,0.254628,0.713293,0.479347,0.416962,0.632833,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.266651,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.0140903,0.279553,0.25563,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.0293669,0.290415,0.353147,0.112422,0.170886,0.039537,0.315656,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.0480552,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.0369803,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.0311922,0.095257,0.328852,0.332769,0.262022,0.04166,0.266687,0.184534,0.0338675,0.31749,0.15156,0.287598,0.313858,0.223773,0.25788,0.181895,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.228479,0.127111,0.037179,0.390754,0.0725176,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.0387226,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.0737175,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.0393151,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.0671916,0.132374,0.285122,0.22741,0.203996,0.0424072,0.321965,0.264707,0.450113|tfbs_overrepresentation_for_novel_motifs=0.590005,1.03954,0.581696,0.741427,0.534346,0.739643,0.821651,0.395818,0.392841,1.44778,0.706765,0.867962,0.341754,0.809319,0.532789,0.559384,1.05593,0.471262,0.938585,0.635753,0.581762,0.975621,0.731221,0.528529,1.53003,0.892087,0.316693,0.728867,0.537869,0.297585,0.682839,1.09415,0.433165,0.344471,2.14358,0.0842336,1.23038,0.740899,0.463978,1.72725,0.493145,0.66492,1.03152,0.53106,1.59529,0.61613,0.822818,0.694903,0.173425,0.538016,0.90714,0.83543,0.699149,1.17354,1.33024,0.812467,0.54284,0.777235,0.297448,0.776148,1.13655,0.825354,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,1.5667,0.402607,1.98423,1.32819,0.893276,1.54953,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,2.34631,1.18341,0.291738,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,2.0177,0.354969,1.15558,0.939507,0.272395,0.465545,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,0.516141,0.594299,2.58439,0.575476,1.70537,1.46636,0.489254,1.27972,0.681522,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,1.91548,6.57915,1.24902,4.69098,0.824835,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,1.08488,0.820225,4.32515|tfbs_overrepresentation_jaspar=MA0003.1;4.10305,MA0004.1;0.71247,MA0006.1;0.532262,MA0007.1;0.6918,MA0009.1;1.20602,MA0014.1;4.49713,MA0017.1;0.577281,MA0019.1;0.873355,MA0024.1;1.09684,MA0025.1;1.34373,MA0027.1;2.83281,MA0028.1;1.35734,MA0029.1;1.11704,MA0030.1;1.10506,MA0031.1;1.03735,MA0038.1;0.824639,MA0040.1;1.12314,MA0041.1;0.732902,MA0042.1;0.697662,MA0043.1;1.20635,MA0046.1;1.19471,MA0048.1;1.30988,MA0050.1;0.69864,MA0051.1;0.820063,MA0052.1;1.12718,MA0055.1;0.791759,MA0056.1;0,MA0057.1;0.248209,MA0058.1;0.605914,MA0059.1;0.604454,MA0060.1;1.80156,MA0061.1;0.360128,MA0063.1;0,MA0066.1;0.825101,MA0067.1;1.53181,MA0068.1;2.31526,MA0069.1;1.19071,MA0070.1;1.17908,MA0071.1;0.782546,MA0072.1;1.1744,MA0073.1;14.5548,MA0074.1;0.819248,MA0076.1;0.623864,MA0077.1;1.16637,MA0078.1;0.926725,MA0081.1;0.604638,MA0083.1;1.21381,MA0084.1;1.72172,MA0087.1;1.17185,MA0088.1;4.77747,MA0089.1;0,MA0090.1;0.640115,MA0091.1;0.715356,MA0092.1;0.673508,MA0093.1;0.535768,MA0095.1;0,MA0098.1;0,MA0100.1;0.83965,MA0101.1;0.539569,MA0103.1;0.521546,MA0105.1;1.22348,MA0106.1;2.01886,MA0107.1;0.453492,MA0108.2;1.03412,MA0109.1;0,MA0111.1;0.655276,MA0113.1;0.886811,MA0114.1;0.447443,MA0115.1;1.45393,MA0116.1;0.457606,MA0117.1;1.24497,MA0119.1;0.586221,MA0122.1;1.27173,MA0124.1;1.41151,MA0125.1;1.32534,MA0130.1;0,MA0131.1;0.94608,MA0132.1;0,MA0133.1;0,MA0135.1;1.23748,MA0136.1;0.832277,MA0139.1;4.40535,MA0140.1;0.779643,MA0141.1;0.602484,MA0142.1;1.00381,MA0143.1;0.887001,MA0144.1;1.09982,MA0145.1;0.569905,MA0146.1;2.31379,MA0147.1;2.03364,MA0148.1;0.739888,MA0149.1;0.769072,MA0062.2;0.353589,MA0035.2;0.778873,MA0039.2;2.01147,MA0138.2;0.928035,MA0002.2;0.379056,MA0137.2;1.37305,MA0104.2;1.79838,MA0047.2;0.856092,MA0112.2;1.05083,MA0065.2;0.577908,MA0150.1;0.633493,MA0151.1;0,MA0152.1;0.78681,MA0153.1;1.30799,MA0154.1;0.229241,MA0155.1;1.61785,MA0156.1;0.560797,MA0157.1;0.97481,MA0158.1;0,MA0159.1;0.462502,MA0160.1;0.756582,MA0161.1;0,MA0162.1;2.15942,MA0163.1;0.539587,MA0164.1;0.90014,MA0080.2;0.535868,MA0018.2;0.870662,MA0099.2;0.7872,MA0079.2;5.92758,MA0102.2;1.75932,MA0258.1;0.418966,MA0259.1;2.06681,MA0442.1;0}} | ||
| | |||
}} |
Latest revision as of 12:04, 17 September 2013
Full id: C2390_Renal_Endothelial_Alveolar_Hepatic_Mesenchymal_Sebocyte_mesothelioma
Phase1 CAGE Peaks
Hg19::chr16:75285508..75285580,- | p1@BCAR1 |
Hg19::chr16:75285587..75285599,- | p6@BCAR1 |
Hg19::chr16:75285612..75285626,- | p4@BCAR1 |
Hg19::chr16:75299845..75299883,- | p2@BCAR1 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.10e-25 | 250 |
mesodermal cell | 5.70e-24 | 121 |
lining cell | 3.70e-18 | 58 |
barrier cell | 3.70e-18 | 58 |
endothelial cell | 1.19e-17 | 36 |
meso-epithelial cell | 5.39e-17 | 45 |
endothelial cell of vascular tree | 1.20e-16 | 24 |
epithelial cell | 1.37e-13 | 253 |
blood vessel endothelial cell | 4.30e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.30e-13 | 18 |
squamous epithelial cell | 1.31e-11 | 63 |
epithelial cell of nephron | 8.94e-08 | 15 |
fibroblast | 1.20e-07 | 76 |
contractile cell | 1.27e-07 | 59 |
endothelial cell of artery | 2.78e-07 | 9 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 4.10305 |
MA0004.1 | 0.71247 |
MA0006.1 | 0.532262 |
MA0007.1 | 0.6918 |
MA0009.1 | 1.20602 |
MA0014.1 | 4.49713 |
MA0017.1 | 0.577281 |
MA0019.1 | 0.873355 |
MA0024.1 | 1.09684 |
MA0025.1 | 1.34373 |
MA0027.1 | 2.83281 |
MA0028.1 | 1.35734 |
MA0029.1 | 1.11704 |
MA0030.1 | 1.10506 |
MA0031.1 | 1.03735 |
MA0038.1 | 0.824639 |
MA0040.1 | 1.12314 |
MA0041.1 | 0.732902 |
MA0042.1 | 0.697662 |
MA0043.1 | 1.20635 |
MA0046.1 | 1.19471 |
MA0048.1 | 1.30988 |
MA0050.1 | 0.69864 |
MA0051.1 | 0.820063 |
MA0052.1 | 1.12718 |
MA0055.1 | 0.791759 |
MA0056.1 | 0 |
MA0057.1 | 0.248209 |
MA0058.1 | 0.605914 |
MA0059.1 | 0.604454 |
MA0060.1 | 1.80156 |
MA0061.1 | 0.360128 |
MA0063.1 | 0 |
MA0066.1 | 0.825101 |
MA0067.1 | 1.53181 |
MA0068.1 | 2.31526 |
MA0069.1 | 1.19071 |
MA0070.1 | 1.17908 |
MA0071.1 | 0.782546 |
MA0072.1 | 1.1744 |
MA0073.1 | 14.5548 |
MA0074.1 | 0.819248 |
MA0076.1 | 0.623864 |
MA0077.1 | 1.16637 |
MA0078.1 | 0.926725 |
MA0081.1 | 0.604638 |
MA0083.1 | 1.21381 |
MA0084.1 | 1.72172 |
MA0087.1 | 1.17185 |
MA0088.1 | 4.77747 |
MA0089.1 | 0 |
MA0090.1 | 0.640115 |
MA0091.1 | 0.715356 |
MA0092.1 | 0.673508 |
MA0093.1 | 0.535768 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.83965 |
MA0101.1 | 0.539569 |
MA0103.1 | 0.521546 |
MA0105.1 | 1.22348 |
MA0106.1 | 2.01886 |
MA0107.1 | 0.453492 |
MA0108.2 | 1.03412 |
MA0109.1 | 0 |
MA0111.1 | 0.655276 |
MA0113.1 | 0.886811 |
MA0114.1 | 0.447443 |
MA0115.1 | 1.45393 |
MA0116.1 | 0.457606 |
MA0117.1 | 1.24497 |
MA0119.1 | 0.586221 |
MA0122.1 | 1.27173 |
MA0124.1 | 1.41151 |
MA0125.1 | 1.32534 |
MA0130.1 | 0 |
MA0131.1 | 0.94608 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.23748 |
MA0136.1 | 0.832277 |
MA0139.1 | 4.40535 |
MA0140.1 | 0.779643 |
MA0141.1 | 0.602484 |
MA0142.1 | 1.00381 |
MA0143.1 | 0.887001 |
MA0144.1 | 1.09982 |
MA0145.1 | 0.569905 |
MA0146.1 | 2.31379 |
MA0147.1 | 2.03364 |
MA0148.1 | 0.739888 |
MA0149.1 | 0.769072 |
MA0062.2 | 0.353589 |
MA0035.2 | 0.778873 |
MA0039.2 | 2.01147 |
MA0138.2 | 0.928035 |
MA0002.2 | 0.379056 |
MA0137.2 | 1.37305 |
MA0104.2 | 1.79838 |
MA0047.2 | 0.856092 |
MA0112.2 | 1.05083 |
MA0065.2 | 0.577908 |
MA0150.1 | 0.633493 |
MA0151.1 | 0 |
MA0152.1 | 0.78681 |
MA0153.1 | 1.30799 |
MA0154.1 | 0.229241 |
MA0155.1 | 1.61785 |
MA0156.1 | 0.560797 |
MA0157.1 | 0.97481 |
MA0158.1 | 0 |
MA0159.1 | 0.462502 |
MA0160.1 | 0.756582 |
MA0161.1 | 0 |
MA0162.1 | 2.15942 |
MA0163.1 | 0.539587 |
MA0164.1 | 0.90014 |
MA0080.2 | 0.535868 |
MA0018.2 | 0.870662 |
MA0099.2 | 0.7872 |
MA0079.2 | 5.92758 |
MA0102.2 | 1.75932 |
MA0258.1 | 0.418966 |
MA0259.1 | 2.06681 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CCNT2#905 | 3 | 4.75215118272197 | 0.0138620699668949 | 0.048717593474191 |
E2F4#1874 | 3 | 9.50104523646333 | 0.00185075103472827 | 0.0109265453542106 |
ETS1#2113 | 4 | 9.72876092220234 | 0.000111595531741814 | 0.00154492652963723 |
FOXA1#3169 | 3 | 8.31106481203909 | 0.00274013818210985 | 0.0150350578754529 |
HEY1#23462 | 4 | 4.04011104310571 | 0.0037530463691798 | 0.0185879646109342 |
MYC#4609 | 4 | 5.2222818716094 | 0.00134430939527274 | 0.00887081120445374 |
NFYB#4801 | 3 | 12.5698449401523 | 0.00081145639769735 | 0.00618731800533793 |
POU2F2#5452 | 3 | 6.82959304330689 | 0.00486047377520374 | 0.0227562209444794 |
TAF1#6872 | 4 | 3.34304628574529 | 0.00800566489870165 | 0.0321912615545182 |
TBP#6908 | 4 | 3.70677068709639 | 0.00529637781478435 | 0.0243957132662196 |
YY1#7528 | 4 | 4.91117074985386 | 0.0017187183805544 | 0.0106750656524961 |
ZNF143#7702 | 3 | 10.1256574141709 | 0.00153486161068818 | 0.00976542258657711 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.