FFCP PHASE1:Mm9::chrX:98579065..98579080,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14618|HGNC=|MCL_coexpression_id=20|UniProt=P28230|association_with_transcript=0bp_to_ENSMUST00000119190_5end|description=CAGE_peak_4_at_Gjb1_5end|id=chrX:98579065..98579080,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-08,44;CL:0000133,2.04e-08,44;CL:0000117,2.07e-08,23;CL:0000337,2.07e-08,23;CL:0002610,2.81e-08,3;CL:0002614,3.88e-08,3;CL:0002319,1.52e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.88e-20!75;UBERON:0001016!2.88e-20!75;UBERON:0004121!3.66e-19!102;UBERON:0000924!3.66e-19!102;UBERON:0006601!3.66e-19!102;UBERON:0001017!2.85e-18!73;UBERON:0005743!2.85e-18!73;UBERON:0001049!6.96e-18!52;UBERON:0005068!6.96e-18!52;UBERON:0006241!6.96e-18!52;UBERON:0007135!6.96e-18!52;UBERON:0000033!1.66e-16!63;UBERON:0000955!2.36e-16!50;UBERON:0006238!2.36e-16!50;UBERON:0002616!2.26e-15!49;UBERON:0002346!1.64e-13!71;UBERON:0003075!1.64e-13!71;UBERON:0007284!1.64e-13!71;UBERON:0002020!3.46e-13!34;UBERON:0003076!3.42e-11!12;UBERON:0003057!3.42e-11!12;UBERON:0002298!6.88e-10!6;UBERON:0002021!8.21e-10!10;UBERON:0000411!8.21e-10!10;UBERON:0001950!8.21e-10!10;UBERON:0007811!1.64e-09!86;UBERON:0003080!2.48e-09!40;UBERON:0003056!3.33e-09!49;UBERON:0002791!8.87e-09!29;UBERON:0003528!8.87e-09!29;UBERON:0001893!8.87e-09!29;UBERON:0000153!1.36e-08!94;UBERON:0002780!1.76e-08!39;UBERON:0001890!1.76e-08!39;UBERON:0006240!1.76e-08!39;UBERON:0002240!1.94e-08!6;UBERON:0005174!1.94e-08!6;UBERON:0001137!1.94e-08!6;UBERON:0001948!5.67e-07!5;UBERON:0002315!5.67e-07!5;UBERON:0002950!5.87e-07!4;UBERON:0001891!5.87e-07!4;UBERON:0009616!5.87e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.15e-29,75;UBERON:0000073,1.76e-27,54;UBERON:0001017,8.65e-26,73;UBERON:0004121,3.92e-24,95;UBERON:0000924,3.92e-24,95;UBERON:0006601,3.92e-24,95;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0002346,6.13e-20,64;UBERON:0003075,6.13e-20,64;UBERON:0007284,6.13e-20,64;UBERON:0000955,1.16e-18,47;UBERON:0006238,1.16e-18,47;UBERON:0010371,4.26e-18,73;UBERON:0002616,2.97e-17,46;UBERON:0002020,8.19e-17,34;UBERON:0003076,1.19e-14,12;UBERON:0003057,1.19e-14,12;UBERON:0010314,5.43e-13,92;UBERON:0003080,2.22e-12,40;UBERON:0002021,4.41e-12,10;UBERON:0000411,4.41e-12,10;UBERON:0001950,4.41e-12,10;UBERON:0003528,7.47e-12,29;UBERON:0002791,7.47e-12,29;UBERON:0001893,7.47e-12,29;UBERON:0002780,4.28e-11,39;UBERON:0001890,4.28e-11,39;UBERON:0006240,4.28e-11,39;UBERON:0003056,1.39e-10,49;UBERON:0002950,3.27e-10,4;UBERON:0001891,3.27e-10,4;UBERON:0009616,3.27e-10,4;UBERON:0010286,3.27e-10,4;UBERON:0002240,2.57e-09,6;UBERON:0005174,2.57e-09,6;UBERON:0001137,2.57e-09,6;UBERON:0002619,1.92e-08,17;UBERON:0004684,2.81e-08,3;UBERON:0002275,2.81e-08,3;UBERON:0000956,3.28e-08,21;UBERON:0001869,3.28e-08,21;UBERON:0000203,3.28e-08,21;UBERON:0002038,3.88e-08,3;UBERON:0009663,3.88e-08,3;UBERON:0009661,3.88e-08,3;UBERON:0000125,3.88e-08,3;UBERON:0002308,3.88e-08,3;UBERON:0000025,1.26e-07,114;UBERON:0004111,1.88e-07,122;UBERON:0001948,4.01e-07,5;UBERON:0002315,4.01e-07,5;UBERON:0011216,4.34e-07,194;UBERON:0004733,5.94e-07,6;UBERON:0004732,5.94e-07,6;UBERON:0002028,5.94e-07,6;UBERON:0007277,5.94e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89480143673926,5.76327457982332,0,0,0,20.8525218614777,14.3564551618549,0,0,0,25.3266526298594,24.2605942361857,22.5801603886678,0,0.182975287204819,0,44.9484628392223,14.069065250792,23.2253336620751,1.17851434189467,1.28134512719193,0.372798891650601,21.8848698732902,4.60986516651392,0,0,0,0,0,0,1.12355536105401,0,0,0,1.12674735821344,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,12.296793474485,23.2485844562935,0,0,0,0,17.0761328921498,12.8100168789215,0,6.95297280769106,5.62574006126727,26.3890816590641,21.2536054618763,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,6.72927835405207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,60.6881230153854,54.8550693251511,0,0.504941854408746,0,0,0,0,0,0,0,0,0,5.78378369559253,0,0,0,0,0,1.21390318077491,0.604647113929502,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,71.2033159720357,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.71853182343688,2.05524755931193,0,2.70009000092722,1.80128481289688,4.07828168085784,2.5888015587591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| ||
|EntrezGene=14618 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=P28230 | |||
|association_with_transcript=0bp_to_ENSMUST00000119190_5end | |||
|description=CAGE_peak_4_at_Gjb1_5end | |||
|id=chrX:98579065..98579080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-08,44;CL:0000133,2.04e-08,44;CL:0000117,2.07e-08,23;CL:0000337,2.07e-08,23;CL:0002610,2.81e-08,3;CL:0002614,3.88e-08,3;CL:0002319,1.52e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.88e-20!75;UBERON:0001016!2.88e-20!75;UBERON:0004121!3.66e-19!102;UBERON:0000924!3.66e-19!102;UBERON:0006601!3.66e-19!102;UBERON:0001017!2.85e-18!73;UBERON:0005743!2.85e-18!73;UBERON:0001049!6.96e-18!52;UBERON:0005068!6.96e-18!52;UBERON:0006241!6.96e-18!52;UBERON:0007135!6.96e-18!52;UBERON:0000033!1.66e-16!63;UBERON:0000955!2.36e-16!50;UBERON:0006238!2.36e-16!50;UBERON:0002616!2.26e-15!49;UBERON:0002346!1.64e-13!71;UBERON:0003075!1.64e-13!71;UBERON:0007284!1.64e-13!71;UBERON:0002020!3.46e-13!34;UBERON:0003076!3.42e-11!12;UBERON:0003057!3.42e-11!12;UBERON:0002298!6.88e-10!6;UBERON:0002021!8.21e-10!10;UBERON:0000411!8.21e-10!10;UBERON:0001950!8.21e-10!10;UBERON:0007811!1.64e-09!86;UBERON:0003080!2.48e-09!40;UBERON:0003056!3.33e-09!49;UBERON:0002791!8.87e-09!29;UBERON:0003528!8.87e-09!29;UBERON:0001893!8.87e-09!29;UBERON:0000153!1.36e-08!94;UBERON:0002780!1.76e-08!39;UBERON:0001890!1.76e-08!39;UBERON:0006240!1.76e-08!39;UBERON:0002240!1.94e-08!6;UBERON:0005174!1.94e-08!6;UBERON:0001137!1.94e-08!6;UBERON:0001948!5.67e-07!5;UBERON:0002315!5.67e-07!5;UBERON:0002950!5.87e-07!4;UBERON:0001891!5.87e-07!4;UBERON:0009616!5.87e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.15e-29,75;UBERON:0000073,1.76e-27,54;UBERON:0001017,8.65e-26,73;UBERON:0004121,3.92e-24,95;UBERON:0000924,3.92e-24,95;UBERON:0006601,3.92e-24,95;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0002346,6.13e-20,64;UBERON:0003075,6.13e-20,64;UBERON:0007284,6.13e-20,64;UBERON:0000955,1.16e-18,47;UBERON:0006238,1.16e-18,47;UBERON:0010371,4.26e-18,73;UBERON:0002616,2.97e-17,46;UBERON:0002020,8.19e-17,34;UBERON:0003076,1.19e-14,12;UBERON:0003057,1.19e-14,12;UBERON:0010314,5.43e-13,92;UBERON:0003080,2.22e-12,40;UBERON:0002021,4.41e-12,10;UBERON:0000411,4.41e-12,10;UBERON:0001950,4.41e-12,10;UBERON:0003528,7.47e-12,29;UBERON:0002791,7.47e-12,29;UBERON:0001893,7.47e-12,29;UBERON:0002780,4.28e-11,39;UBERON:0001890,4.28e-11,39;UBERON:0006240,4.28e-11,39;UBERON:0003056,1.39e-10,49;UBERON:0002950,3.27e-10,4;UBERON:0001891,3.27e-10,4;UBERON:0009616,3.27e-10,4;UBERON:0010286,3.27e-10,4;UBERON:0002240,2.57e-09,6;UBERON:0005174,2.57e-09,6;UBERON:0001137,2.57e-09,6;UBERON:0002619,1.92e-08,17;UBERON:0004684,2.81e-08,3;UBERON:0002275,2.81e-08,3;UBERON:0000956,3.28e-08,21;UBERON:0001869,3.28e-08,21;UBERON:0000203,3.28e-08,21;UBERON:0002038,3.88e-08,3;UBERON:0009663,3.88e-08,3;UBERON:0009661,3.88e-08,3;UBERON:0000125,3.88e-08,3;UBERON:0002308,3.88e-08,3;UBERON:0000025,1.26e-07,114;UBERON:0004111,1.88e-07,122;UBERON:0001948,4.01e-07,5;UBERON:0002315,4.01e-07,5;UBERON:0011216,4.34e-07,194;UBERON:0004733,5.94e-07,6;UBERON:0004732,5.94e-07,6;UBERON:0002028,5.94e-07,6;UBERON:0007277,5.94e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89480143673926,5.76327457982332,0,0,0,20.8525218614777,14.3564551618549,0,0,0,25.3266526298594,24.2605942361857,22.5801603886678,0,0.182975287204819,0,44.9484628392223,14.069065250792,23.2253336620751,1.17851434189467,1.28134512719193,0.372798891650601,21.8848698732902,4.60986516651392,0,0,0,0,0,0,1.12355536105401,0,0,0,1.12674735821344,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,12.296793474485,23.2485844562935,0,0,0,0,17.0761328921498,12.8100168789215,0,6.95297280769106,5.62574006126727,26.3890816590641,21.2536054618763,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,6.72927835405207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,60.6881230153854,54.8550693251511,0,0.504941854408746,0,0,0,0,0,0,0,0,0,5.78378369559253,0,0,0,0,0,1.21390318077491,0.604647113929502,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,71.2033159720357,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.71853182343688,2.05524755931193,0,2.70009000092722,1.80128481289688,4.07828168085784,2.5888015587591,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,1.62307484934295 | |||
|short_description=p4@Gjb1 | |||
}} |
Revision as of 20:20, 14 September 2013
Short description: | p4@Gjb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gjb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000119190_5end |
EntrezGene: | Gjb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.04e-08 | 44 |
neurectodermal cell | 2.04e-08 | 44 |
CNS neuron (sensu Vertebrata) | 2.07e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-08 | 23 |
raphe nuclei neuron | 2.81e-08 | 3 |
neuron of the substantia nigra | 3.88e-08 | 3 |
neural cell | 1.52e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.