FFCP PHASE1:Mm9::chrX:7499203..7499232,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7499203..7499232,+|id=chrX:7499203..7499232,+|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0002319!3.43e-14!43;CL:0000117!1.05e-13!23;CL:0000337!1.05e-13!23;CL:0000221!1.25e-13!44;CL:0000133!1.25e-13!44;CL:0000393!8.79e-12!39;CL:0000211!8.79e-12!39;CL:0000055!9.29e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.83e-18,23;CL:0000337,8.83e-18,23;CL:0000540,3.17e-13,33;CL:0000047,3.17e-13,33;CL:0000031,3.17e-13,33;CL:0000404,3.17e-13,33;CL:0002319,1.16e-12,43;CL:0000221,2.76e-12,44;CL:0000133,2.76e-12,44;CL:0000393,1.14e-10,39;CL:0000211,1.14e-10,39;CL:0002610,1.61e-08,3;CL:0002614,2.27e-08,3;CL:0002612,5.53e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.96e-42!73;UBERON:0005743!9.96e-42!73;UBERON:0000073!3.27e-41!75;UBERON:0001016!3.27e-41!75;UBERON:0004121!4.80e-33!102;UBERON:0000924!4.80e-33!102;UBERON:0006601!4.80e-33!102;UBERON:0001049!8.77e-32!52;UBERON:0005068!8.77e-32!52;UBERON:0006241!8.77e-32!52;UBERON:0007135!8.77e-32!52;UBERON:0002346!1.41e-30!71;UBERON:0003075!1.41e-30!71;UBERON:0007284!1.41e-30!71;UBERON:0000955!1.12e-29!50;UBERON:0006238!1.12e-29!50;UBERON:0002616!7.55e-29!49;UBERON:0000033!1.95e-24!63;UBERON:0003080!2.75e-22!40;UBERON:0002780!2.75e-21!39;UBERON:0001890!2.75e-21!39;UBERON:0006240!2.75e-21!39;UBERON:0003056!4.66e-20!49;UBERON:0002020!5.93e-19!34;UBERON:0002791!2.07e-14!29;UBERON:0003528!2.07e-14!29;UBERON:0001893!2.07e-14!29;UBERON:0007811!1.58e-13!86;UBERON:0000153!4.36e-11!94;UBERON:0003076!7.65e-10!12;UBERON:0003057!7.65e-10!12;UBERON:0002021!1.20e-09!10;UBERON:0000411!1.20e-09!10;UBERON:0001950!1.20e-09!10;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002619!1.15e-08!17;UBERON:0001894!6.00e-08!10;UBERON:0006222!6.00e-08!10;UBERON:0002298!2.31e-07!6;UBERON:0002240!3.65e-07!6;UBERON:0005174!3.65e-07!6;UBERON:0001137!3.65e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.62e-37,73;UBERON:0001016,1.13e-35,75;UBERON:0000073,1.02e-34,54;UBERON:0001049,7.94e-31,52;UBERON:0005068,7.94e-31,52;UBERON:0006241,7.94e-31,52;UBERON:0007135,7.94e-31,52;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0002346,7.80e-26,64;UBERON:0003075,7.80e-26,64;UBERON:0007284,7.80e-26,64;UBERON:0002020,1.76e-23,34;UBERON:0010371,7.57e-22,73;UBERON:0002616,1.71e-20,46;UBERON:0000955,6.03e-20,47;UBERON:0006238,6.03e-20,47;UBERON:0003080,3.16e-17,40;UBERON:0010314,5.44e-16,92;UBERON:0002780,1.18e-15,39;UBERON:0001890,1.18e-15,39;UBERON:0006240,1.18e-15,39;UBERON:0003076,1.23e-15,12;UBERON:0003057,1.23e-15,12;UBERON:0003528,5.97e-15,29;UBERON:0002791,5.97e-15,29;UBERON:0001893,5.97e-15,29;UBERON:0002240,1.60e-14,6;UBERON:0005174,1.60e-14,6;UBERON:0001137,1.60e-14,6;UBERON:0003056,2.99e-13,49;UBERON:0001948,3.31e-12,5;UBERON:0002315,3.31e-12,5;UBERON:0002021,7.93e-11,10;UBERON:0000411,7.93e-11,10;UBERON:0001950,7.93e-11,10;UBERON:0002950,1.23e-10,4;UBERON:0001891,1.23e-10,4;UBERON:0009616,1.23e-10,4;UBERON:0010286,1.23e-10,4;UBERON:0000025,1.30e-10,114;UBERON:0002420,3.14e-10,8;UBERON:0007245,3.14e-10,8;UBERON:0010009,3.14e-10,8;UBERON:0010011,3.14e-10,8;UBERON:0000454,3.14e-10,8;UBERON:0004111,1.67e-09,122;UBERON:0011216,2.70e-09,194;UBERON:0004684,1.61e-08,3;UBERON:0002275,1.61e-08,3;UBERON:0002038,2.27e-08,3;UBERON:0009663,2.27e-08,3;UBERON:0009661,2.27e-08,3;UBERON:0000125,2.27e-08,3;UBERON:0002308,2.27e-08,3;UBERON:0002257,5.53e-08,3;UBERON:0002619,1.14e-07,17;UBERON:0000956,1.85e-07,21;UBERON:0001869,1.85e-07,21;UBERON:0000203,1.85e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,2.39680088414724,5.37905627450176,0.207379224616955,0.405017814995072,0,1.42825492201902,2.87129103237098,0.244981598429908,0.0958454710182364,0,3.30347642998166,2.55374676170375,2.15049146558741,0.791317726381163,1.28082701043374,0,3.62937898701795,1.68828783009504,2.59757021220577,3.24091444021034,1.85083185038834,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.608930956624282,0,0.150722640552623,0.940709657085638,0,0,0,0,0,0,0,0,0.878342391034642,23.8769245767339,0,0,0,0.127070227073065,2.54644086988199,1.83000241127451,1.13088916901578,1.21677024134594,1.79000820131231,1.87009240103604,0.973447578406546,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.514523061896422,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:7499203..7499232,+ | |||
|id=chrX:7499203..7499232,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0002319!3.43e-14!43;CL:0000117!1.05e-13!23;CL:0000337!1.05e-13!23;CL:0000221!1.25e-13!44;CL:0000133!1.25e-13!44;CL:0000393!8.79e-12!39;CL:0000211!8.79e-12!39;CL:0000055!9.29e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.83e-18,23;CL:0000337,8.83e-18,23;CL:0000540,3.17e-13,33;CL:0000047,3.17e-13,33;CL:0000031,3.17e-13,33;CL:0000404,3.17e-13,33;CL:0002319,1.16e-12,43;CL:0000221,2.76e-12,44;CL:0000133,2.76e-12,44;CL:0000393,1.14e-10,39;CL:0000211,1.14e-10,39;CL:0002610,1.61e-08,3;CL:0002614,2.27e-08,3;CL:0002612,5.53e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.96e-42!73;UBERON:0005743!9.96e-42!73;UBERON:0000073!3.27e-41!75;UBERON:0001016!3.27e-41!75;UBERON:0004121!4.80e-33!102;UBERON:0000924!4.80e-33!102;UBERON:0006601!4.80e-33!102;UBERON:0001049!8.77e-32!52;UBERON:0005068!8.77e-32!52;UBERON:0006241!8.77e-32!52;UBERON:0007135!8.77e-32!52;UBERON:0002346!1.41e-30!71;UBERON:0003075!1.41e-30!71;UBERON:0007284!1.41e-30!71;UBERON:0000955!1.12e-29!50;UBERON:0006238!1.12e-29!50;UBERON:0002616!7.55e-29!49;UBERON:0000033!1.95e-24!63;UBERON:0003080!2.75e-22!40;UBERON:0002780!2.75e-21!39;UBERON:0001890!2.75e-21!39;UBERON:0006240!2.75e-21!39;UBERON:0003056!4.66e-20!49;UBERON:0002020!5.93e-19!34;UBERON:0002791!2.07e-14!29;UBERON:0003528!2.07e-14!29;UBERON:0001893!2.07e-14!29;UBERON:0007811!1.58e-13!86;UBERON:0000153!4.36e-11!94;UBERON:0003076!7.65e-10!12;UBERON:0003057!7.65e-10!12;UBERON:0002021!1.20e-09!10;UBERON:0000411!1.20e-09!10;UBERON:0001950!1.20e-09!10;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002619!1.15e-08!17;UBERON:0001894!6.00e-08!10;UBERON:0006222!6.00e-08!10;UBERON:0002298!2.31e-07!6;UBERON:0002240!3.65e-07!6;UBERON:0005174!3.65e-07!6;UBERON:0001137!3.65e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.62e-37,73;UBERON:0001016,1.13e-35,75;UBERON:0000073,1.02e-34,54;UBERON:0001049,7.94e-31,52;UBERON:0005068,7.94e-31,52;UBERON:0006241,7.94e-31,52;UBERON:0007135,7.94e-31,52;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0002346,7.80e-26,64;UBERON:0003075,7.80e-26,64;UBERON:0007284,7.80e-26,64;UBERON:0002020,1.76e-23,34;UBERON:0010371,7.57e-22,73;UBERON:0002616,1.71e-20,46;UBERON:0000955,6.03e-20,47;UBERON:0006238,6.03e-20,47;UBERON:0003080,3.16e-17,40;UBERON:0010314,5.44e-16,92;UBERON:0002780,1.18e-15,39;UBERON:0001890,1.18e-15,39;UBERON:0006240,1.18e-15,39;UBERON:0003076,1.23e-15,12;UBERON:0003057,1.23e-15,12;UBERON:0003528,5.97e-15,29;UBERON:0002791,5.97e-15,29;UBERON:0001893,5.97e-15,29;UBERON:0002240,1.60e-14,6;UBERON:0005174,1.60e-14,6;UBERON:0001137,1.60e-14,6;UBERON:0003056,2.99e-13,49;UBERON:0001948,3.31e-12,5;UBERON:0002315,3.31e-12,5;UBERON:0002021,7.93e-11,10;UBERON:0000411,7.93e-11,10;UBERON:0001950,7.93e-11,10;UBERON:0002950,1.23e-10,4;UBERON:0001891,1.23e-10,4;UBERON:0009616,1.23e-10,4;UBERON:0010286,1.23e-10,4;UBERON:0000025,1.30e-10,114;UBERON:0002420,3.14e-10,8;UBERON:0007245,3.14e-10,8;UBERON:0010009,3.14e-10,8;UBERON:0010011,3.14e-10,8;UBERON:0000454,3.14e-10,8;UBERON:0004111,1.67e-09,122;UBERON:0011216,2.70e-09,194;UBERON:0004684,1.61e-08,3;UBERON:0002275,1.61e-08,3;UBERON:0002038,2.27e-08,3;UBERON:0009663,2.27e-08,3;UBERON:0009661,2.27e-08,3;UBERON:0000125,2.27e-08,3;UBERON:0002308,2.27e-08,3;UBERON:0002257,5.53e-08,3;UBERON:0002619,1.14e-07,17;UBERON:0000956,1.85e-07,21;UBERON:0001869,1.85e-07,21;UBERON:0000203,1.85e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,2.39680088414724,5.37905627450176,0.207379224616955,0.405017814995072,0,1.42825492201902,2.87129103237098,0.244981598429908,0.0958454710182364,0,3.30347642998166,2.55374676170375,2.15049146558741,0.791317726381163,1.28082701043374,0,3.62937898701795,1.68828783009504,2.59757021220577,3.24091444021034,1.85083185038834,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.608930956624282,0,0.150722640552623,0.940709657085638,0,0,0,0,0,0,0,0,0.878342391034642,23.8769245767339,0,0,0,0.127070227073065,2.54644086988199,1.83000241127451,1.13088916901578,1.21677024134594,1.79000820131231,1.87009240103604,0.973447578406546,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.514523061896422,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0,0.780877488593277,1.50796378412959,0,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,2.7235168460303,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.891844088010353,0.658196082408484,1.8267896946876,0,0,0,0,0,0,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.419437377702843,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33191572024439,0.807424709485281,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.3748254587495,2.05524755931193,2.2661816921691,3.37511250115903,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.765153328275374,0.220591419119515,0 | |||
|short_description=p@chrX:7499203..7499232,+ | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p@chrX:7499203..7499232, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7499203..7499232, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.83e-18 | 23 |
neuroblast (sensu Vertebrata) | 8.83e-18 | 23 |
neuron | 3.17e-13 | 33 |
neuronal stem cell | 3.17e-13 | 33 |
neuroblast | 3.17e-13 | 33 |
electrically signaling cell | 3.17e-13 | 33 |
neural cell | 1.16e-12 | 43 |
ectodermal cell | 2.76e-12 | 44 |
neurectodermal cell | 2.76e-12 | 44 |
electrically responsive cell | 1.14e-10 | 39 |
electrically active cell | 1.14e-10 | 39 |
raphe nuclei neuron | 1.61e-08 | 3 |
neuron of the substantia nigra | 2.27e-08 | 3 |
neuron of the ventral spinal cord | 5.53e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.