FFCP PHASE1:Mm9::chrX:71173335..71173359,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19703|HGNC=|MCL_coexpression_id=61|UniProt=|association_with_transcript=59bp_to_ENSMUST00000149130_5end|description=CAGE_peak_4_at_Renbp_5end|id=chrX:71173335..71173359,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.59e-09,31;UBERON:0005409,3.62e-07,47|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01683524623343,12.2307924114679,26.6315876557583,0,12.6818195137488,7.79139147280835,11.3405189063456,7.21367122340745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017538247707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,1.03017528619447,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,0.561849044819294,0.640251524048693,0.861532034334199,0.476293691283074,0.695305955669133,1.35036454324594,0,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,1.30811774969096,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.355905054372522,0.394017929502254,0,0.154936841185966,1.35034627686799,0,1.40358965067245,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p4@Renbp}} | ||
|EntrezGene=19703 | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENSMUST00000149130_5end | |||
|description=CAGE_peak_4_at_Renbp_5end | |||
|id=chrX:71173335..71173359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.59e-09,31;UBERON:0005409,3.62e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01683524623343,12.2307924114679,26.6315876557583,0,12.6818195137488,7.79139147280835,11.3405189063456,7.21367122340745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017538247707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,1.03017528619447,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,0.561849044819294,0.640251524048693,0.861532034334199,0.476293691283074,0.695305955669133,1.35036454324594,0,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,1.30811774969096,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.355905054372522,0.394017929502254,0,0.154936841185966,1.35034627686799,0,1.40358965067245,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Renbp | |||
}} | |||
Revision as of 20:05, 14 September 2013
| Short description: | p4@Renbp |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Renbp_5end |
| Coexpression cluster: | MCL_coexpression_mm9:61 |
| Association with transcript: | 59bp_to_ENSMUST00000149130_5end |
| EntrezGene: | Renbp |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 3.59e-09 | 31 |
| gastrointestinal system | 3.62e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
