FFCP PHASE1:Mm9::chr9:66682466..66682484,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68318|HGNC=|MCL_coexpression_id=193|UniProt=Q4R1J7|association_with_transcript=-11bp_to_ENSMUST00000057261_5end|description=CAGE_peak_1_at_Aph1c_5end|id=chr9:66682466..66682484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!3.45e-10!98;UBERON:0005177!6.65e-09!85;UBERON:0009569!5.58e-08!66;UBERON:0005172!6.20e-07!49;UBERON:0005173!6.20e-07!49;UBERON:0002417!6.20e-07!49;UBERON:0000916!6.20e-07!49;UBERON:0000466!7.98e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.23e-10,90;UBERON:0005177,1.47e-09,79;UBERON:0009569,1.30e-07,66|phase1_expression=1.44133962394315,0,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,1.33243904726265,1.82227740650843,1.39912375625629,0.630924330716475,1.7824876368746,3.39511721438424,5.95303031057488,0.0992909512008853,0,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,60.2685548261147,43.7547792933328,45.5465657257204,57.6466858270394,53.9605933117172,51.9496077743334,0.377690453926732,0.608261587317087,0.550640256485045,0,0.436050312760893,4.39372365468944,4.47188767870852,0.55994568650145,0,0.335565212115473,0,0,0.771778308107841,0.85960031981627,1.03134418455488,0,0,0.633831403506179,0,0.889294796111139,26.0970918011606,30.6548572395762,34.1030455174128,4.79360176829448,3.07374644257244,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0,0,0,0.893811366596314,0.46081959976873,0,0.182975287204819,0,0.558365998002762,2.25105044012672,1.68078072554491,0.294628585473668,0.854230084794618,0.372798891650601,0.227178579999552,0,3.18850937571846,1.72084775396277,0,1.07940638327563,1.94932925234301,2.68816132258401,5.75822122540183,0,0,0,3.23939865486365,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,4.5673551887624,2.33044095282455,2.82040064223167,0.520455980298408,3.95805121805784,3.22861696158482,1.65794904607885,2.82212897125692,1.0053327306374,11.6181634835156,0.86759614151947,5.30766331169925,0.808834249737046,1.76673214768315,0.969750506270444,5.59175283654366,0.585561594023094,0.83778682725382,1.53274233125155,2.39630249011841,1.79970819298022,4.44745794755726,1.04853447583376,0.915001205637253,0,1.56441888173049,1.79000820131231,0.41557608911912,0.648965052271031,0.916554274652847,2.48813941220186,2.77995034277042,2.31486041475121,0.650602214813519,0.459804208866946,0.360124259610698,1.05493372485001,1.56483948048054,1.0249097622788,1.3118241438362,6.20888089773638,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0,0.823128545631774,1.19420560091096,2.80885274925294,2.05878325691772,2.84163499395593,0,0.234526059981096,0,0,0.590292695242212,0,0,0,0.350296027101508,0.16455984991348,0,0.405344047729279,0.292399974850665,0.878200461164203,0.939444931322602,4.20579897128254,1.13195073617213,0,0.264450566663544,0.853153002140936,0.928946687441754,0.38660238396628,1.21010114774006,4.66993892074228,15.2180500890047,0.949058123089023,13.0112174231969,28.903549012031,28.6497319739257,23.7856186285327,2.69645822596266,0.648414149624083,0.796565093017469,0.948339504765408,1.25673363870702,2.25415471346161,4.68398054044223,8.72786192254316,7.08371780892217,12.9634901104727,18.3036583494707,26.375786277351,28.8749363577013,0.889357881261447,0.500535317148282,0,0.674586337154561,1.01430060694251,1.20588579876208,1.78238096246994,2.87696137450811,3.56697498905078,0.823684239564244,1.43768206527355,4.83783231969054,3.12037673114561,1.51547326768267,2.15276896226295,5.30687873499704,4.80358294433172,0,0.488894929326078,0.678980343100753,1.40814148973101,1.84256883185997,2.61848004974615,3.51240566144038,1.7339865851681,2.87904096543407,1.75400245523236,4.26044618260919,3.62638461918381,6.07526046042349,182.457453566519,47.3197944922277,1.47529281905711,0.827810238914197,1.12385412991454,0.703270119553219,0,0.504941854408746,0,0,0.430846795465598,0.477937595905104,0,0,1.21443210502468,0.876767573733936,0.395287777946524,2.24924921495265,3.40656204499845,1.6025904330053,0.325773918707152,4.45419332025846,1.32745138339963,0,0.906970670894253,3.01768127609437,2.36241514304618,2.76691633149535,4.13485269069154,3.99887102425256,1.42598951353889,6.0046984007805,5.27093042874994,7.21948802737308,1.70219802876894,0,0.258717367565509,0,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,22.5284839741162,8.68511490541663,3.08739757276947,0.98931751764888,1.45317984026315,0.844380948994182,1.3130957840345,1.64140899745061,3.49777003955821,1.11255181206306,2.9048049735635,2.27025554759545,2.22233432843654,1.31857919903284,0.956859594047176,1.60144721244566,4.41943917984024,4.3384950220334,3.45499934511059,0,0.316335993581135,1.21991680276109,0.972048067396211,0.418176592028937,0.655087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| ||
|EntrezGene=68318 | |||
|HGNC= | |||
|MCL_coexpression_id=193 | |||
|UniProt=Q4R1J7 | |||
|association_with_transcript=-11bp_to_ENSMUST00000057261_5end | |||
|description=CAGE_peak_1_at_Aph1c_5end | |||
|id=chr9:66682466..66682484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.45e-10!98;UBERON:0005177!6.65e-09!85;UBERON:0009569!5.58e-08!66;UBERON:0005172!6.20e-07!49;UBERON:0005173!6.20e-07!49;UBERON:0002417!6.20e-07!49;UBERON:0000916!6.20e-07!49;UBERON:0000466!7.98e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.23e-10,90;UBERON:0005177,1.47e-09,79;UBERON:0009569,1.30e-07,66 | |||
|phase1_expression=1.44133962394315,0,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,1.33243904726265,1.82227740650843,1.39912375625629,0.630924330716475,1.7824876368746,3.39511721438424,5.95303031057488,0.0992909512008853,0,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,60.2685548261147,43.7547792933328,45.5465657257204,57.6466858270394,53.9605933117172,51.9496077743334,0.377690453926732,0.608261587317087,0.550640256485045,0,0.436050312760893,4.39372365468944,4.47188767870852,0.55994568650145,0,0.335565212115473,0,0,0.771778308107841,0.85960031981627,1.03134418455488,0,0,0.633831403506179,0,0.889294796111139,26.0970918011606,30.6548572395762,34.1030455174128,4.79360176829448,3.07374644257244,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0,0,0,0.893811366596314,0.46081959976873,0,0.182975287204819,0,0.558365998002762,2.25105044012672,1.68078072554491,0.294628585473668,0.854230084794618,0.372798891650601,0.227178579999552,0,3.18850937571846,1.72084775396277,0,1.07940638327563,1.94932925234301,2.68816132258401,5.75822122540183,0,0,0,3.23939865486365,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,4.5673551887624,2.33044095282455,2.82040064223167,0.520455980298408,3.95805121805784,3.22861696158482,1.65794904607885,2.82212897125692,1.0053327306374,11.6181634835156,0.86759614151947,5.30766331169925,0.808834249737046,1.76673214768315,0.969750506270444,5.59175283654366,0.585561594023094,0.83778682725382,1.53274233125155,2.39630249011841,1.79970819298022,4.44745794755726,1.04853447583376,0.915001205637253,0,1.56441888173049,1.79000820131231,0.41557608911912,0.648965052271031,0.916554274652847,2.48813941220186,2.77995034277042,2.31486041475121,0.650602214813519,0.459804208866946,0.360124259610698,1.05493372485001,1.56483948048054,1.0249097622788,1.3118241438362,6.20888089773638,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0,0.823128545631774,1.19420560091096,2.80885274925294,2.05878325691772,2.84163499395593,0,0.234526059981096,0,0,0.590292695242212,0,0,0,0.350296027101508,0.16455984991348,0,0.405344047729279,0.292399974850665,0.878200461164203,0.939444931322602,4.20579897128254,1.13195073617213,0,0.264450566663544,0.853153002140936,0.928946687441754,0.38660238396628,1.21010114774006,4.66993892074228,15.2180500890047,0.949058123089023,13.0112174231969,28.903549012031,28.6497319739257,23.7856186285327,2.69645822596266,0.648414149624083,0.796565093017469,0.948339504765408,1.25673363870702,2.25415471346161,4.68398054044223,8.72786192254316,7.08371780892217,12.9634901104727,18.3036583494707,26.375786277351,28.8749363577013,0.889357881261447,0.500535317148282,0,0.674586337154561,1.01430060694251,1.20588579876208,1.78238096246994,2.87696137450811,3.56697498905078,0.823684239564244,1.43768206527355,4.83783231969054,3.12037673114561,1.51547326768267,2.15276896226295,5.30687873499704,4.80358294433172,0,0.488894929326078,0.678980343100753,1.40814148973101,1.84256883185997,2.61848004974615,3.51240566144038,1.7339865851681,2.87904096543407,1.75400245523236,4.26044618260919,3.62638461918381,6.07526046042349,182.457453566519,47.3197944922277,1.47529281905711,0.827810238914197,1.12385412991454,0.703270119553219,0,0.504941854408746,0,0,0.430846795465598,0.477937595905104,0,0,1.21443210502468,0.876767573733936,0.395287777946524,2.24924921495265,3.40656204499845,1.6025904330053,0.325773918707152,4.45419332025846,1.32745138339963,0,0.906970670894253,3.01768127609437,2.36241514304618,2.76691633149535,4.13485269069154,3.99887102425256,1.42598951353889,6.0046984007805,5.27093042874994,7.21948802737308,1.70219802876894,0,0.258717367565509,0,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,22.5284839741162,8.68511490541663,3.08739757276947,0.98931751764888,1.45317984026315,0.844380948994182,1.3130957840345,1.64140899745061,3.49777003955821,1.11255181206306,2.9048049735635,2.27025554759545,2.22233432843654,1.31857919903284,0.956859594047176,1.60144721244566,4.41943917984024,4.3384950220334,3.45499934511059,0,0.316335993581135,1.21991680276109,0.972048067396211,0.418176592028937,0.655087691238533,1.48350781023303,1.32245529160537,3.40282724579238,0.90730481304255,36.0376801590417,1.12738587736838,0.299033092087958,0.992750942742586,1.16670713006429,1.93739735216597,2.02747350588934,2.58185925020659,0.39061315453185,1.46803082195995,4.1069300540421,2.59227005632079,0.632022241256357,0.608175645870493,0.616265742988964,0.909445760844565,0.358053391334963,0.198681354781265,0.600977247599844,0.147689527174577,0.605798699688886,0.228620419965,0.201652370273681,0.194915761479505,0.769694733122636,1.05189211963412,0.453460767230423,1.55390167361845,0.269141569828427,0.335769232728157,0.579568782096571,12.7624083306804,2.01466786693992,2.14368379079066,1.5047163121060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| |||
|short_description=p1@Aph1c | |||
}} | |||
Revision as of 18:34, 14 September 2013
| Short description: | p1@Aph1c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Aph1c_5end |
| Coexpression cluster: | MCL_coexpression_mm9:193 |
| Association with transcript: | -11bp_to_ENSMUST00000057261_5end |
| EntrezGene: | Aph1c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk | 7.23e-10 | 90 |
| trunk region element | 1.47e-09 | 79 |
| subdivision of trunk | 1.30e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
