FFCP PHASE1:Mm9::chr9:55056747..55056796,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71999|HGNC=|MCL_coexpression_id=3147|UniProt=D6REV6,D6RFT2,Q3V492|association_with_transcript=0bp_to_ENSMUST00000140375,ENSMUST00000153970,uc009psd.1_5end|description=CAGE_peak_1_at_Fbxo22_5end|id=chr9:55056747..55056796,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000480!8.61e-09!308;UBERON:0000467!8.61e-09!308;UBERON:0000344!1.45e-08!15;UBERON:0002050!3.19e-08!317;UBERON:0005423!3.19e-08!317;UBERON:0000025!7.05e-08!114;UBERON:0001242!9.45e-08!13;UBERON:0000060!9.45e-08!13;UBERON:0001262!9.45e-08!13;UBERON:0004786!9.45e-08!13;UBERON:0000923!1.65e-07!314;UBERON:0005291!1.65e-07!314;UBERON:0006598!1.65e-07!314;UBERON:0002532!1.65e-07!314;UBERON:0004111!2.58e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-11,31;UBERON:0005423,4.92e-10,304;UBERON:0000344,1.45e-08,15;UBERON:0000025,7.05e-08,114;UBERON:0001242,9.45e-08,13;UBERON:0001262,9.45e-08,13;UBERON:0004786,9.45e-08,13;UBERON:0002050,1.74e-07,294;UBERON:0004111,2.58e-07,122;UBERON:0000923,6.34e-07,291;UBERON:0010316,6.34e-07,291;UBERON:0005291,6.34e-07,291;UBERON:0006598,6.34e-07,291;UBERON:0010317,6.34e-07,291;UBERON:0002532,6.34e-07,291;UBERON:0010314,6.44e-07,92|phase1_expression=25.4636666896622,34.8975407639361,38.219936108721,62.6100917405138,63.6137577031861,30.2182689441402,27.3326789496765,20.9179783975354,2.25261955442667,0.936258105287974,7.70480857014772,6.78063351460359,20.3728868618135,18.4457049104085,12.6581709489952,14.3757439846776,9.09430441566591,28.8647881302787,27.285772287542,29.2828859740641,21.5159524082207,20.2553540449806,24.5527801790599,30.5585527535407,30.5114343819336,34.4539178469012,38.7685796543167,30.1659725760245,39.144824408013,33.0159469985509,24.3903561720835,10.1604907753541,22.7573971406291,0,33.5067878911479,40.3950188221136,38.9963470461125,18.4153917524239,23.440060335714,21.9879972468995,24.1174910092716,19.8083190637949,33.0147040061184,26.4383317748712,23.1139403180493,23.6775310288569,19.559783608701,23.5467168890882,25.4835971971987,24.1093074852111,27.4373386385711,28.7505128729943,20.8050431511593,13.7818806982155,18.1490651536931,20.8380143189117,14.0401385569991,26.814948798427,30.3474691289397,31.2104677770499,31.0577387718028,11.8595586224196,20.4537803105562,16.6481447697059,17.7995945262055,20.6039233334369,14.9800055259202,13.831858991576,34.3212616741061,26.4611639130114,29.8661445118962,18.5673139862472,23.412065340871,32.4600617919628,34.3126786245286,28.4957823849107,23.1243350098716,25.154405602782,26.4203237200739,29.278755876103,34.1248910636988,23.962015045611,28.4766658981409,29.826418331679,26.586895113165,19.4454866412621,21.7828671622628,26.8415201988433,29.3060368199422,30.4553387230346,14.2033599463822,54.2067042498273,21.759082678648,60.9864606550733,50.6825605609182,41.6665005000522,29.7742170679314,19.7699174190547,12.2099422163348,17.3136391510067,22.5349471642689,16.6824420638613,5.09610479413291,14.2213340630666,20.7831399370766,21.2822286999083,21.2320266906209,31.9714863213368,24.5990989464813,24.9382793628906,19.0833859442749,17.0500667854799,16.3737003051802,18.0867168663147,17.0503625346772,27.3953169098693,29.1690061926561,19.0871151134283,15.0383793831479,17.3090529443728,18.1090045137523,16.0008833534623,24.2309289583559,25.4719293400046,27.2280718857492,30.3993895698224,14.3778149407104,24.5960119707297,18.4251829255944,30.5572904385838,25.6200337578431,28.5235379296202,26.2474723490337,29.6629930503183,28.0513860155406,27.2565321953833,21.4881057724167,19.4074874151745,15.1633655060205,36.6168829242465,24.4626432769883,27.3583504275833,22.3277040958633,22.756427493193,23.4725922072081,25.7508577772548,27.4546052960005,20.4375662883822,24.7903191872769,22.6927296201383,22.3457927688215,18.1932457914887,14.4584569597311,13.2335823278423,13.3758388665163,21.0976322827603,22.4708219940235,26.2494865257009,31.8263119323064,25.2693442493312,23.9216581180718,26.2890609733082,25.8051761787879,30.1049274573528,23.4486011588815,22.78832658554,30.5831677595566,28.6075088799565,26.0004562863299,23.8042822914688,27.5633952455909,28.8013975227905,27.4437644113813,31.0016827336459,20.1878350621562,33.2381897985089,48.2411423156345,33.3207713996066,20.2623838008472,25.0815605609274,21.9074684247559,28.0340099226446,22.4601824283319,25.3000082729704,32.2679761850268,30.79870453339,26.8928673416288,28.2518190298434,31.9741102875357,34.1551375288604,32.6368455310788,42.815373749689,23.139483916276,20.4504837571415,19.1603150644237,18.3286195060783,25.2138233317913,26.862019017992,31.7447416363772,39.707129806513,41.7616616058057,46.5207307985188,47.1359677068567,16.3508203601772,17.8868685553015,13.4917267430912,12.9830477688642,19.2941727801933,19.6061905871693,18.1248566594011,22.0503908414048,29.9271940375009,40.2550978276593,30.1434167611488,33.0759933501434,52.2838277350521,56.3307878458804,61.752770734511,19.5838381576601,24.254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| ||
|EntrezGene=71999 | |||
|HGNC= | |||
|MCL_coexpression_id=3147 | |||
|UniProt=D6REV6,D6RFT2,Q3V492 | |||
|association_with_transcript=0bp_to_ENSMUST00000140375,ENSMUST00000153970,uc009psd.1_5end | |||
|description=CAGE_peak_1_at_Fbxo22_5end | |||
|id=chr9:55056747..55056796,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!8.61e-09!308;UBERON:0000467!8.61e-09!308;UBERON:0000344!1.45e-08!15;UBERON:0002050!3.19e-08!317;UBERON:0005423!3.19e-08!317;UBERON:0000025!7.05e-08!114;UBERON:0001242!9.45e-08!13;UBERON:0000060!9.45e-08!13;UBERON:0001262!9.45e-08!13;UBERON:0004786!9.45e-08!13;UBERON:0000923!1.65e-07!314;UBERON:0005291!1.65e-07!314;UBERON:0006598!1.65e-07!314;UBERON:0002532!1.65e-07!314;UBERON:0004111!2.58e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-11,31;UBERON:0005423,4.92e-10,304;UBERON:0000344,1.45e-08,15;UBERON:0000025,7.05e-08,114;UBERON:0001242,9.45e-08,13;UBERON:0001262,9.45e-08,13;UBERON:0004786,9.45e-08,13;UBERON:0002050,1.74e-07,294;UBERON:0004111,2.58e-07,122;UBERON:0000923,6.34e-07,291;UBERON:0010316,6.34e-07,291;UBERON:0005291,6.34e-07,291;UBERON:0006598,6.34e-07,291;UBERON:0010317,6.34e-07,291;UBERON:0002532,6.34e-07,291;UBERON:0010314,6.44e-07,92 | |||
|phase1_expression=25.4636666896622,34.8975407639361,38.219936108721,62.6100917405138,63.6137577031861,30.2182689441402,27.3326789496765,20.9179783975354,2.25261955442667,0.936258105287974,7.70480857014772,6.78063351460359,20.3728868618135,18.4457049104085,12.6581709489952,14.3757439846776,9.09430441566591,28.8647881302787,27.285772287542,29.2828859740641,21.5159524082207,20.2553540449806,24.5527801790599,30.5585527535407,30.5114343819336,34.4539178469012,38.7685796543167,30.1659725760245,39.144824408013,33.0159469985509,24.3903561720835,10.1604907753541,22.7573971406291,0,33.5067878911479,40.3950188221136,38.9963470461125,18.4153917524239,23.440060335714,21.9879972468995,24.1174910092716,19.8083190637949,33.0147040061184,26.4383317748712,23.1139403180493,23.6775310288569,19.559783608701,23.5467168890882,25.4835971971987,24.1093074852111,27.4373386385711,28.7505128729943,20.8050431511593,13.7818806982155,18.1490651536931,20.8380143189117,14.0401385569991,26.814948798427,30.3474691289397,31.2104677770499,31.0577387718028,11.8595586224196,20.4537803105562,16.6481447697059,17.7995945262055,20.6039233334369,14.9800055259202,13.831858991576,34.3212616741061,26.4611639130114,29.8661445118962,18.5673139862472,23.412065340871,32.4600617919628,34.3126786245286,28.4957823849107,23.1243350098716,25.154405602782,26.4203237200739,29.278755876103,34.1248910636988,23.962015045611,28.4766658981409,29.826418331679,26.586895113165,19.4454866412621,21.7828671622628,26.8415201988433,29.3060368199422,30.4553387230346,14.2033599463822,54.2067042498273,21.759082678648,60.9864606550733,50.6825605609182,41.6665005000522,29.7742170679314,19.7699174190547,12.2099422163348,17.3136391510067,22.5349471642689,16.6824420638613,5.09610479413291,14.2213340630666,20.7831399370766,21.2822286999083,21.2320266906209,31.9714863213368,24.5990989464813,24.9382793628906,19.0833859442749,17.0500667854799,16.3737003051802,18.0867168663147,17.0503625346772,27.3953169098693,29.1690061926561,19.0871151134283,15.0383793831479,17.3090529443728,18.1090045137523,16.0008833534623,24.2309289583559,25.4719293400046,27.2280718857492,30.3993895698224,14.3778149407104,24.5960119707297,18.4251829255944,30.5572904385838,25.6200337578431,28.5235379296202,26.2474723490337,29.6629930503183,28.0513860155406,27.2565321953833,21.4881057724167,19.4074874151745,15.1633655060205,36.6168829242465,24.4626432769883,27.3583504275833,22.3277040958633,22.756427493193,23.4725922072081,25.7508577772548,27.4546052960005,20.4375662883822,24.7903191872769,22.6927296201383,22.3457927688215,18.1932457914887,14.4584569597311,13.2335823278423,13.3758388665163,21.0976322827603,22.4708219940235,26.2494865257009,31.8263119323064,25.2693442493312,23.9216581180718,26.2890609733082,25.8051761787879,30.1049274573528,23.4486011588815,22.78832658554,30.5831677595566,28.6075088799565,26.0004562863299,23.8042822914688,27.5633952455909,28.8013975227905,27.4437644113813,31.0016827336459,20.1878350621562,33.2381897985089,48.2411423156345,33.3207713996066,20.2623838008472,25.0815605609274,21.9074684247559,28.0340099226446,22.4601824283319,25.3000082729704,32.2679761850268,30.79870453339,26.8928673416288,28.2518190298434,31.9741102875357,34.1551375288604,32.6368455310788,42.815373749689,23.139483916276,20.4504837571415,19.1603150644237,18.3286195060783,25.2138233317913,26.862019017992,31.7447416363772,39.707129806513,41.7616616058057,46.5207307985188,47.1359677068567,16.3508203601772,17.8868685553015,13.4917267430912,12.9830477688642,19.2941727801933,19.6061905871693,18.1248566594011,22.0503908414048,29.9271940375009,40.2550978276593,30.1434167611488,33.0759933501434,52.2838277350521,56.3307878458804,61.752770734511,19.5838381576601,24.254900706622,24.1188165134198,21.2181357218985,15.4895563870411,18.9282070909252,19.0434912708811,21.6598349122157,19.5467578691677,16.3883870340093,22.1642128433907,21.1383675983302,20.3768278601757,18.659728557015,16.5870412333199,20.1245103012923,18.1952781017043,20.1433824802455,26.1697461680101,27.6619580357599,18.3607138821876,22.7223834483936,19.5615096038079,14.8366722832723,20.0343759891503,22.2240982095873,24.5078541490634,17.8338214396964,19.8357243820698,17.5353514746787,20.5549644532192,18.9579576688866,27.1105562747793,21.7240036474051,21.501078634672,27.2200702904683,25.2215762845929,16.5090832585387,22.0696196584268,14.3339860614483,17.4228116799656,13.8345816574767,22.224833212467,15.6319503675327,18.5378636760055,16.1178746547266,20.0295356292498,13.4076206222643,26.5542892487955,20.887086907632,21.7322588755028,21.2193664681276,21.4581682707151,21.0475204770443,21.72047071948,18.5723618959906,30.0379786321549,24.9961843619308,20.2886126210565,19.6214641000361,14.6932628293274,18.576380877872,18.383340976483,18.876203470682,29.7310453362448,26.5158181875029,16.7453463181896,15.8917888331681,18.8898417917106,13.7508973613424,12.4391747226133,17.3871411636957,16.1479508494163,17.4939315404573,15.340197092291,27.6854479224383,24.8323754961191,26.024891792236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| |||
|short_description=p1@Fbxo22 | |||
}} |
Revision as of 18:15, 14 September 2013
Short description: | p1@Fbxo22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fbxo22_5end |
Coexpression cluster: | MCL_coexpression_mm9:3147 |
Association with transcript: | 0bp_to_ENSMUST00000140375, ENSMUST00000153970, uc009psd.1_5end |
EntrezGene: | Fbxo22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-11 | 31 |
developing anatomical structure | 4.92e-10 | 304 |
mucosa | 1.45e-08 | 15 |
tube | 7.05e-08 | 114 |
intestinal mucosa | 9.45e-08 | 13 |
wall of intestine | 9.45e-08 | 13 |
gastrointestinal system mucosa | 9.45e-08 | 13 |
embryonic structure | 1.74e-07 | 294 |
anatomical conduit | 2.58e-07 | 122 |
germ layer | 6.34e-07 | 291 |
germ layer / neural crest | 6.34e-07 | 291 |
embryonic tissue | 6.34e-07 | 291 |
presumptive structure | 6.34e-07 | 291 |
germ layer / neural crest derived structure | 6.34e-07 | 291 |
epiblast (generic) | 6.34e-07 | 291 |
structure with developmental contribution from neural crest | 6.44e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.