FFCP PHASE1:Mm9::chr9:35477209..35477263,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330921|HGNC=|MCL_coexpression_id=9|UniProt=Q3UW31|association_with_transcript=0bp_to_ENSMUST00000118254,ENSMUST00000173488,ENSMUST00000174549,NM_001033421_5end|description=CAGE_peak_1_at_Pate2_5end|id=chr9:35477209..35477263,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!3.66e-13!3;UBERON:0006555!3.66e-13!3;UBERON:0005103!3.66e-13!3;UBERON:0000083!3.66e-13!3;UBERON:0009201!3.66e-13!3;UBERON:0004819!3.66e-13!3;UBERON:0006553!3.66e-13!3;UBERON:0003074!3.66e-13!3;UBERON:0003060!3.66e-13!3;UBERON:0000080!4.16e-10!4;UBERON:0005904!4.16e-10!4;UBERON:0006947!4.16e-10!4;UBERON:0002120!4.16e-10!4;UBERON:0004054!4.16e-10!4;UBERON:0004875!4.16e-10!4;UBERON:0004876!4.16e-10!4;UBERON:0005721!4.16e-10!4;UBERON:0005754!4.16e-10!4;UBERON:0007297!4.16e-10!4;UBERON:0000058!4.99e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0003135,1.32e-09,15;UBERON:0000058,1.78e-09,7;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8861383571379,383.380424543885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1134703066354,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Pate2}} | ||
|EntrezGene=330921 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q3UW31 | |||
|association_with_transcript=0bp_to_ENSMUST00000118254,ENSMUST00000173488,ENSMUST00000174549,NM_001033421_5end | |||
|description=CAGE_peak_1_at_Pate2_5end | |||
|id=chr9:35477209..35477263,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.66e-13!3;UBERON:0006555!3.66e-13!3;UBERON:0005103!3.66e-13!3;UBERON:0000083!3.66e-13!3;UBERON:0009201!3.66e-13!3;UBERON:0004819!3.66e-13!3;UBERON:0006553!3.66e-13!3;UBERON:0003074!3.66e-13!3;UBERON:0003060!3.66e-13!3;UBERON:0000080!4.16e-10!4;UBERON:0005904!4.16e-10!4;UBERON:0006947!4.16e-10!4;UBERON:0002120!4.16e-10!4;UBERON:0004054!4.16e-10!4;UBERON:0004875!4.16e-10!4;UBERON:0004876!4.16e-10!4;UBERON:0005721!4.16e-10!4;UBERON:0005754!4.16e-10!4;UBERON:0007297!4.16e-10!4;UBERON:0000058!4.99e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0003135,1.32e-09,15;UBERON:0000058,1.78e-09,7;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8861383571379,383.380424543885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1134703066354,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Pate2 | |||
}} |
Revision as of 17:42, 14 September 2013
Short description: | p1@Pate2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pate2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000118254, ENSMUST00000173488, ENSMUST00000174549, NM_001033421_5end |
EntrezGene: | Pate2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.01e-20 | 3 |
excretory tube | 1.01e-20 | 3 |
mesonephric epithelium | 1.01e-20 | 3 |
mesonephric tubule | 1.01e-20 | 3 |
nephric duct | 1.01e-20 | 3 |
kidney epithelium | 1.01e-20 | 3 |
renal duct | 1.01e-20 | 3 |
mesonephric duct | 1.01e-20 | 3 |
pronephric duct | 1.01e-20 | 3 |
mesonephros | 8.06e-16 | 4 |
duct of male reproductive system | 8.06e-16 | 4 |
male genital duct | 8.06e-16 | 4 |
pronephros | 8.06e-16 | 4 |
internal male genitalia | 8.06e-16 | 4 |
nephrogenic cord | 8.06e-16 | 4 |
urogenital ridge | 8.06e-16 | 4 |
pronephric mesoderm | 8.06e-16 | 4 |
rostral part of nephrogenic cord | 8.06e-16 | 4 |
presumptive pronephric mesoderm | 8.06e-16 | 4 |
male reproductive organ | 1.32e-09 | 15 |
duct | 1.78e-09 | 7 |
male organism | 4.76e-09 | 16 |
male reproductive system | 4.76e-09 | 16 |
seminiferous tubule of testis | 1.09e-08 | 2 |
epithelium of male gonad | 1.09e-08 | 2 |
epithelium of gonad | 1.09e-08 | 2 |
epithelial cord | 1.09e-08 | 2 |
sex cord | 1.09e-08 | 2 |
testis sex cord | 1.09e-08 | 2 |
genital ridge | 1.09e-08 | 2 |
primitive sex cord of indifferent gonad | 1.09e-08 | 2 |
coelomic epithelium | 1.09e-08 | 2 |
internal genitalia | 1.40e-07 | 9 |
intraembryonic coelom | 6.53e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.