FFCP PHASE1:Mm9::chr9:107199174..107199231,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12700|HGNC=|UniProt=Q8C3F4|association_with_transcript=0bp_to_ENSMUST00000163673_5end|description=CAGE_peak_1_at_Cish_5end|id=chr9:107199174..107199231,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001041!9.53e-12!92;UBERON:0000077!4.99e-11!97;UBERON:0003104!7.04e-09!131;UBERON:0009142!7.04e-09!131;UBERON:0000926!1.06e-08!193;UBERON:0004120!1.06e-08!193;UBERON:0006603!1.06e-08!193;UBERON:0001048!1.09e-08!147;UBERON:0000466!1.99e-07!79;UBERON:0002365!6.71e-07!25;UBERON:0002330!6.71e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.58e-09,80;UBERON:0005177,3.11e-08,79;UBERON:0002365,6.71e-07,25;UBERON:0002330,6.71e-07,25|phase1_expression=8.0074423552397,3.48975407639361,1.36499771816861,3.93203474698879,3.00537437967808,3.86122325397347,5.13947809310157,283.296571630818,310.157554900122,441.44569664328,143.480657372973,186.10844693612,15.0656642339461,22.0299414095873,48.9671349869024,105.894564844879,191.679954607112,2.83915948822414,3.29074640653773,1.27316895539409,14.7124891961351,101.971806883309,63.9939483390392,3.35984087866154,2.06468352960453,1.72269589234506,2.58457197695445,1.939241094173,9.5011709728187,7.56090389279792,0.886922042621219,26.6712882853045,28.9080450164748,110.937176710807,0.577703239502549,3.82339684324532,4.08338712524738,12.9744805528441,8.5946887897618,12.5645698553712,12.3528612486513,15.0270006690858,23.3044969454954,1.1330713617802,1.52065396829272,18.9053154726532,13.3006528539167,4.57852828398938,6.15121311656521,9.52706505463989,6.57936181639204,5.75010257459886,3.52343472721246,38.4441935266013,5.71359458542189,3.60163210450326,22.0630748752843,13.9231464914909,2.83243045203437,3.70293685490423,1.26766280701236,8.4711133017283,10.6715375533337,0.899899717281399,0.988866362566974,2.1314403448383,6.89080254192331,4.99483796918021,1.14058573539325,2.29510095163874,0.630974884054146,3.99911378165325,1.98781686856452,2.32732518508413,1.34183659425531,2.75765635983006,1.10115880999389,3.06449611404451,1.84327839907492,3.82470234417562,3.20206752608434,1.56274011167028,1.95428099300967,6.19038871034848,5.95913166329559,2.94628585473668,2.13557521198654,2.23679334990361,10.8288456466453,1.81371744256285,151.019398613574,53.346280372846,40.1183086887573,39.3983329895607,120.208637227819,100.358022709803,55.0542126916467,4.4311883870295,7.53379413348319,4.24007489412408,5.7745802108439,2.56652954828636,10.1922095882658,0,21.8655951421326,22.0423082963336,24.7706978057244,24.0927986207217,17.8667139716548,10.5393918736026,4.16364784238726,12.1786191324856,13.6063143381075,14.0172055713939,14.9337658062345,17.3419896034952,311.465659345311,115.968684249769,9.73071607144862,21.5149910430054,20.0965781798958,11.6370060752453,11.1835056730873,2.92780797011547,2.09446706813455,18.13745091981,45.4099321877438,32.394747473644,35.7067338075312,1.79748767285787,2.74500361691176,4.64921102817598,3.65031072403781,3.83573185995496,2.70124457927428,2.75810147215188,22.8120175024708,6.09594155989456,13.3943061969848,35.3542317889276,2.99277018814219,2.29902104433473,3.24111833649629,8.13806016312861,12.5867523429957,6.66191345481219,6.93392761741993,23.2833033665114,1.07783996466421,2.45837904218165,3.51902248327898,4.60311038097907,5.83899223373756,11.4923214952315,23.6649456869135,3.38358253591438,25.2796747432765,19.3010930336036,18.1864639613179,8.07790512888457,8.67746421930056,5.04173772090842,9.70653415899362,13.3799677588235,22.5229984815572,58.8310880218532,94.9687840954652,180.28568861491,130.00228143165,151.526569345005,180.864514096804,159.211786306187,171.249089927019,120.517364046814,3.57492912559016,6.68879980465349,19.8251269790279,7.66906643324278,3.83918850963421,5.57368012465052,7.86091514064769,7.05892336181699,11.1189021922435,18.6421113590308,11.3886974770683,17.2933902460211,10.8074139784116,15.9165177632921,14.622306533934,17.0775687644302,8.42938394511308,6.96994456390285,2.84501851429623,4.22719496655997,5.63538678365402,12.4227309985642,18.4254862809244,19.7081653891795,15.8091342810643,24.0604541206752,32.655735391006,21.5945036863151,57.2153570278197,22.0235539545244,25.3561103696032,15.5154857545549,8.11440485554012,16.8824011826692,42.7771430992785,79.1164377989729,20.1047681201044,31.8491239298175,15.814502718009,41.3076451912039,43.0611988898094,6.06189307073068,47.7197119968286,21.7099584613515,65.0331229386449,3.41084541186873,4.07412441105065,4.92260748748046,6.57132695207806,29.8161138246432,62.1293902712496,77.2729245516883,43.5072997733087,57.8022839983303,46.7202472166437,63.7428294244221,49.9059597592438,54.3880460266484,0,0.54390568381871,135.726939353254,123.895599090825,4.81651769963376,2.93029216480508,3.11476396215683,21.9649706667804,1.26203287766503,0,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0,1.16902343164525,1.18586333383957,3.85585579706168,21.2910127812403,22.970462873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| ||
|EntrezGene=12700 | |||
|HGNC= | |||
|UniProt=Q8C3F4 | |||
|association_with_transcript=0bp_to_ENSMUST00000163673_5end | |||
|description=CAGE_peak_1_at_Cish_5end | |||
|id=chr9:107199174..107199231,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!9.53e-12!92;UBERON:0000077!4.99e-11!97;UBERON:0003104!7.04e-09!131;UBERON:0009142!7.04e-09!131;UBERON:0000926!1.06e-08!193;UBERON:0004120!1.06e-08!193;UBERON:0006603!1.06e-08!193;UBERON:0001048!1.09e-08!147;UBERON:0000466!1.99e-07!79;UBERON:0002365!6.71e-07!25;UBERON:0002330!6.71e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.58e-09,80;UBERON:0005177,3.11e-08,79;UBERON:0002365,6.71e-07,25;UBERON:0002330,6.71e-07,25 | |||
|phase1_expression=8.0074423552397,3.48975407639361,1.36499771816861,3.93203474698879,3.00537437967808,3.86122325397347,5.13947809310157,283.296571630818,310.157554900122,441.44569664328,143.480657372973,186.10844693612,15.0656642339461,22.0299414095873,48.9671349869024,105.894564844879,191.679954607112,2.83915948822414,3.29074640653773,1.27316895539409,14.7124891961351,101.971806883309,63.9939483390392,3.35984087866154,2.06468352960453,1.72269589234506,2.58457197695445,1.939241094173,9.5011709728187,7.56090389279792,0.886922042621219,26.6712882853045,28.9080450164748,110.937176710807,0.577703239502549,3.82339684324532,4.08338712524738,12.9744805528441,8.5946887897618,12.5645698553712,12.3528612486513,15.0270006690858,23.3044969454954,1.1330713617802,1.52065396829272,18.9053154726532,13.3006528539167,4.57852828398938,6.15121311656521,9.52706505463989,6.57936181639204,5.75010257459886,3.52343472721246,38.4441935266013,5.71359458542189,3.60163210450326,22.0630748752843,13.9231464914909,2.83243045203437,3.70293685490423,1.26766280701236,8.4711133017283,10.6715375533337,0.899899717281399,0.988866362566974,2.1314403448383,6.89080254192331,4.99483796918021,1.14058573539325,2.29510095163874,0.630974884054146,3.99911378165325,1.98781686856452,2.32732518508413,1.34183659425531,2.75765635983006,1.10115880999389,3.06449611404451,1.84327839907492,3.82470234417562,3.20206752608434,1.56274011167028,1.95428099300967,6.19038871034848,5.95913166329559,2.94628585473668,2.13557521198654,2.23679334990361,10.8288456466453,1.81371744256285,151.019398613574,53.346280372846,40.1183086887573,39.3983329895607,120.208637227819,100.358022709803,55.0542126916467,4.4311883870295,7.53379413348319,4.24007489412408,5.7745802108439,2.56652954828636,10.1922095882658,0,21.8655951421326,22.0423082963336,24.7706978057244,24.0927986207217,17.8667139716548,10.5393918736026,4.16364784238726,12.1786191324856,13.6063143381075,14.0172055713939,14.9337658062345,17.3419896034952,311.465659345311,115.968684249769,9.73071607144862,21.5149910430054,20.0965781798958,11.6370060752453,11.1835056730873,2.92780797011547,2.09446706813455,18.13745091981,45.4099321877438,32.394747473644,35.7067338075312,1.79748767285787,2.74500361691176,4.64921102817598,3.65031072403781,3.83573185995496,2.70124457927428,2.75810147215188,22.8120175024708,6.09594155989456,13.3943061969848,35.3542317889276,2.99277018814219,2.29902104433473,3.24111833649629,8.13806016312861,12.5867523429957,6.66191345481219,6.93392761741993,23.2833033665114,1.07783996466421,2.45837904218165,3.51902248327898,4.60311038097907,5.83899223373756,11.4923214952315,23.6649456869135,3.38358253591438,25.2796747432765,19.3010930336036,18.1864639613179,8.07790512888457,8.67746421930056,5.04173772090842,9.70653415899362,13.3799677588235,22.5229984815572,58.8310880218532,94.9687840954652,180.28568861491,130.00228143165,151.526569345005,180.864514096804,159.211786306187,171.249089927019,120.517364046814,3.57492912559016,6.68879980465349,19.8251269790279,7.66906643324278,3.83918850963421,5.57368012465052,7.86091514064769,7.05892336181699,11.1189021922435,18.6421113590308,11.3886974770683,17.2933902460211,10.8074139784116,15.9165177632921,14.622306533934,17.0775687644302,8.42938394511308,6.96994456390285,2.84501851429623,4.22719496655997,5.63538678365402,12.4227309985642,18.4254862809244,19.7081653891795,15.8091342810643,24.0604541206752,32.655735391006,21.5945036863151,57.2153570278197,22.0235539545244,25.3561103696032,15.5154857545549,8.11440485554012,16.8824011826692,42.7771430992785,79.1164377989729,20.1047681201044,31.8491239298175,15.814502718009,41.3076451912039,43.0611988898094,6.06189307073068,47.7197119968286,21.7099584613515,65.0331229386449,3.41084541186873,4.07412441105065,4.92260748748046,6.57132695207806,29.8161138246432,62.1293902712496,77.2729245516883,43.5072997733087,57.8022839983303,46.7202472166437,63.7428294244221,49.9059597592438,54.3880460266484,0,0.54390568381871,135.726939353254,123.895599090825,4.81651769963376,2.93029216480508,3.11476396215683,21.9649706667804,1.26203287766503,0,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0,1.16902343164525,1.18586333383957,3.85585579706168,21.2910127812403,22.9704628730759,25.5732526185114,13.1976098378028,22.5666735177937,7.04063844849446,4.83717691143602,9.8074641473067,33.0738120026465,68.8654731394398,53.75308497899,51.6217895858058,45.2751670548596,44.8772196268859,88.551631202999,115.511808437969,45.6189071710076,3.24109969256358,4.2688365648309,4.92975180572662,4.25616560741457,9.81028496811388,12.8348236069654,31.3598897588037,4.22409074514679,11.6507638975101,9.48272111636336,38.7482694412478,34.230458459532,33.5339862600547,26.3812880246932,22.1590214655833,11.0762717919343,2.96680483216816,32.6363382323899,10.5257302661243,15.5563402990558,15.4462134743847,27.202151316484,20.132479242174,131.733283245238,111.541307501955,122.721576738328,59.189578316937,3.63786392618306,9.14937602070819,7.34436317588249,21.32700619347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| |||
|short_description=p1@Cish | |||
}} | |||
Revision as of 16:45, 14 September 2013
| Short description: | p1@Cish |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cish_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000163673_5end |
| EntrezGene: | Cish |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| foregut | 2.58e-09 | 80 |
| trunk region element | 3.11e-08 | 79 |
| exocrine gland | 6.71e-07 | 25 |
| exocrine system | 6.71e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
