FFCP PHASE1:Mm9::chr8:13907736..13907745,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66822|HGNC=|MCL_coexpression_id=794|UniProt=E9Q867|association_with_transcript=-57bp_to_ENSMUST00000098917_5end|description=CAGE_peak_3_at_Fbxo25_5end|id=chr8:13907736..13907745,+|ontology_enrichment_celltype=CL:0000117!6.48e-14!23;CL:0000337!6.48e-14!23;CL:0000540!2.59e-09!33;CL:0000047!2.59e-09!33;CL:0000031!2.59e-09!33;CL:0000404!2.59e-09!33;CL:0000221!5.52e-09!44;CL:0000133!5.52e-09!44;CL:0002319!1.09e-08!43;CL:0000393!1.79e-07!39;CL:0000211!1.79e-07!39;CL:0000055!9.84e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.42e-30,23;CL:0000337,7.42e-30,23;CL:0000540,8.45e-19,33;CL:0000047,8.45e-19,33;CL:0000031,8.45e-19,33;CL:0000404,8.45e-19,33;CL:0002319,1.54e-15,43;CL:0000221,4.98e-15,44;CL:0000133,4.98e-15,44;CL:0000393,6.40e-15,39;CL:0000211,6.40e-15,39;CL:0002609,4.19e-10,6;CL:0002321,7.48e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.45e-22!52;UBERON:0005068!3.45e-22!52;UBERON:0006241!3.45e-22!52;UBERON:0007135!3.45e-22!52;UBERON:0001017!1.50e-21!73;UBERON:0005743!1.50e-21!73;UBERON:0000033!2.76e-21!63;UBERON:0000955!3.50e-21!50;UBERON:0006238!3.50e-21!50;UBERON:0000073!9.37e-21!75;UBERON:0001016!9.37e-21!75;UBERON:0002616!1.39e-20!49;UBERON:0004121!1.56e-19!102;UBERON:0000924!1.56e-19!102;UBERON:0006601!1.56e-19!102;UBERON:0002346!3.95e-19!71;UBERON:0003075!3.95e-19!71;UBERON:0007284!3.95e-19!71;UBERON:0007811!5.01e-17!86;UBERON:0002020!9.01e-17!34;UBERON:0000153!1.36e-16!94;UBERON:0003080!4.51e-16!40;UBERON:0002780!1.83e-15!39;UBERON:0001890!1.83e-15!39;UBERON:0006240!1.83e-15!39;UBERON:0003056!1.93e-15!49;UBERON:0002791!5.23e-14!29;UBERON:0003528!5.23e-14!29;UBERON:0001893!5.23e-14!29;UBERON:0000956!7.98e-10!21;UBERON:0001869!7.98e-10!21;UBERON:0000203!7.98e-10!21;UBERON:0002619!1.01e-07!17;UBERON:0003076!7.91e-07!12;UBERON:0003057!7.91e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.19e-39,54;UBERON:0001017,5.58e-37,73;UBERON:0001049,3.15e-36,52;UBERON:0005068,3.15e-36,52;UBERON:0006241,3.15e-36,52;UBERON:0007135,3.15e-36,52;UBERON:0001016,1.15e-35,75;UBERON:0002020,8.67e-34,34;UBERON:0002346,1.45e-30,64;UBERON:0003075,1.45e-30,64;UBERON:0007284,1.45e-30,64;UBERON:0000955,1.09e-29,47;UBERON:0006238,1.09e-29,47;UBERON:0002616,2.04e-28,46;UBERON:0004121,3.54e-28,95;UBERON:0000924,3.54e-28,95;UBERON:0006601,3.54e-28,95;UBERON:0003528,3.04e-27,29;UBERON:0002791,3.04e-27,29;UBERON:0001893,3.04e-27,29;UBERON:0003080,1.70e-25,40;UBERON:0010371,2.00e-25,73;UBERON:0002780,3.59e-24,39;UBERON:0001890,3.59e-24,39;UBERON:0006240,3.59e-24,39;UBERON:0003056,3.02e-22,49;UBERON:0010314,5.65e-19,92;UBERON:0000956,1.40e-18,21;UBERON:0001869,1.40e-18,21;UBERON:0000203,1.40e-18,21;UBERON:0002619,1.11e-13,17;UBERON:0000025,1.41e-11,114;UBERON:0003076,7.28e-11,12;UBERON:0003057,7.28e-11,12;UBERON:0004111,3.75e-10,122;UBERON:0002420,9.60e-10,8;UBERON:0007245,9.60e-10,8;UBERON:0010009,9.60e-10,8;UBERON:0010011,9.60e-10,8;UBERON:0000454,9.60e-10,8;UBERON:0002240,4.62e-09,6;UBERON:0005174,4.62e-09,6;UBERON:0001137,4.62e-09,6;UBERON:0011216,2.00e-08,194;UBERON:0001954,3.38e-08,7;UBERON:0003022,3.38e-08,7;UBERON:0002421,3.38e-08,7;UBERON:0000349,3.38e-08,7;UBERON:0002600,3.38e-08,7;UBERON:0001948,1.16e-07,5;UBERON:0002315,1.16e-07,5;UBERON:0002021,3.93e-07,10;UBERON:0000411,3.93e-07,10;UBERON:0001950,3.93e-07,10;UBERON:0000483,6.78e-07,174;UBERON:0002950,7.16e-07,4;UBERON:0001891,7.16e-07,4;UBERON:0009616,7.16e-07,4;UBERON:0010286,7.16e-07,4|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.550640256485045,0.782391344348039,0.65407546914134,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0.336093799142464,0,0,0,3.43937983461316,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,0,1.15265491596466,1.8664130215526,2.02508907497536,2.52389953621658,2.28520787523043,1.76694832761291,2.69479758272899,3.45043695665651,4.5960939330501,2.20231761998777,2.80912143787413,2.61131106535614,1.97829431595291,2.37867873366265,0.52091337055676,1.3959149950069,3.37657566019008,2.29197371665215,1.47314292736834,1.42371680799103,2.98239113320481,0.151452386666368,0.302286240427142,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0.502666365318702,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.11981512450592,0,0,2.39665023047716,4.11750542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| ||
|EntrezGene=66822 | |||
|HGNC= | |||
|MCL_coexpression_id=794 | |||
|UniProt=E9Q867 | |||
|association_with_transcript=-57bp_to_ENSMUST00000098917_5end | |||
|description=CAGE_peak_3_at_Fbxo25_5end | |||
|id=chr8:13907736..13907745,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.48e-14!23;CL:0000337!6.48e-14!23;CL:0000540!2.59e-09!33;CL:0000047!2.59e-09!33;CL:0000031!2.59e-09!33;CL:0000404!2.59e-09!33;CL:0000221!5.52e-09!44;CL:0000133!5.52e-09!44;CL:0002319!1.09e-08!43;CL:0000393!1.79e-07!39;CL:0000211!1.79e-07!39;CL:0000055!9.84e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.42e-30,23;CL:0000337,7.42e-30,23;CL:0000540,8.45e-19,33;CL:0000047,8.45e-19,33;CL:0000031,8.45e-19,33;CL:0000404,8.45e-19,33;CL:0002319,1.54e-15,43;CL:0000221,4.98e-15,44;CL:0000133,4.98e-15,44;CL:0000393,6.40e-15,39;CL:0000211,6.40e-15,39;CL:0002609,4.19e-10,6;CL:0002321,7.48e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.45e-22!52;UBERON:0005068!3.45e-22!52;UBERON:0006241!3.45e-22!52;UBERON:0007135!3.45e-22!52;UBERON:0001017!1.50e-21!73;UBERON:0005743!1.50e-21!73;UBERON:0000033!2.76e-21!63;UBERON:0000955!3.50e-21!50;UBERON:0006238!3.50e-21!50;UBERON:0000073!9.37e-21!75;UBERON:0001016!9.37e-21!75;UBERON:0002616!1.39e-20!49;UBERON:0004121!1.56e-19!102;UBERON:0000924!1.56e-19!102;UBERON:0006601!1.56e-19!102;UBERON:0002346!3.95e-19!71;UBERON:0003075!3.95e-19!71;UBERON:0007284!3.95e-19!71;UBERON:0007811!5.01e-17!86;UBERON:0002020!9.01e-17!34;UBERON:0000153!1.36e-16!94;UBERON:0003080!4.51e-16!40;UBERON:0002780!1.83e-15!39;UBERON:0001890!1.83e-15!39;UBERON:0006240!1.83e-15!39;UBERON:0003056!1.93e-15!49;UBERON:0002791!5.23e-14!29;UBERON:0003528!5.23e-14!29;UBERON:0001893!5.23e-14!29;UBERON:0000956!7.98e-10!21;UBERON:0001869!7.98e-10!21;UBERON:0000203!7.98e-10!21;UBERON:0002619!1.01e-07!17;UBERON:0003076!7.91e-07!12;UBERON:0003057!7.91e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.19e-39,54;UBERON:0001017,5.58e-37,73;UBERON:0001049,3.15e-36,52;UBERON:0005068,3.15e-36,52;UBERON:0006241,3.15e-36,52;UBERON:0007135,3.15e-36,52;UBERON:0001016,1.15e-35,75;UBERON:0002020,8.67e-34,34;UBERON:0002346,1.45e-30,64;UBERON:0003075,1.45e-30,64;UBERON:0007284,1.45e-30,64;UBERON:0000955,1.09e-29,47;UBERON:0006238,1.09e-29,47;UBERON:0002616,2.04e-28,46;UBERON:0004121,3.54e-28,95;UBERON:0000924,3.54e-28,95;UBERON:0006601,3.54e-28,95;UBERON:0003528,3.04e-27,29;UBERON:0002791,3.04e-27,29;UBERON:0001893,3.04e-27,29;UBERON:0003080,1.70e-25,40;UBERON:0010371,2.00e-25,73;UBERON:0002780,3.59e-24,39;UBERON:0001890,3.59e-24,39;UBERON:0006240,3.59e-24,39;UBERON:0003056,3.02e-22,49;UBERON:0010314,5.65e-19,92;UBERON:0000956,1.40e-18,21;UBERON:0001869,1.40e-18,21;UBERON:0000203,1.40e-18,21;UBERON:0002619,1.11e-13,17;UBERON:0000025,1.41e-11,114;UBERON:0003076,7.28e-11,12;UBERON:0003057,7.28e-11,12;UBERON:0004111,3.75e-10,122;UBERON:0002420,9.60e-10,8;UBERON:0007245,9.60e-10,8;UBERON:0010009,9.60e-10,8;UBERON:0010011,9.60e-10,8;UBERON:0000454,9.60e-10,8;UBERON:0002240,4.62e-09,6;UBERON:0005174,4.62e-09,6;UBERON:0001137,4.62e-09,6;UBERON:0011216,2.00e-08,194;UBERON:0001954,3.38e-08,7;UBERON:0003022,3.38e-08,7;UBERON:0002421,3.38e-08,7;UBERON:0000349,3.38e-08,7;UBERON:0002600,3.38e-08,7;UBERON:0001948,1.16e-07,5;UBERON:0002315,1.16e-07,5;UBERON:0002021,3.93e-07,10;UBERON:0000411,3.93e-07,10;UBERON:0001950,3.93e-07,10;UBERON:0000483,6.78e-07,174;UBERON:0002950,7.16e-07,4;UBERON:0001891,7.16e-07,4;UBERON:0009616,7.16e-07,4;UBERON:0010286,7.16e-07,4 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.550640256485045,0.782391344348039,0.65407546914134,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0.336093799142464,0,0,0,3.43937983461316,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,0,1.15265491596466,1.8664130215526,2.02508907497536,2.52389953621658,2.28520787523043,1.76694832761291,2.69479758272899,3.45043695665651,4.5960939330501,2.20231761998777,2.80912143787413,2.61131106535614,1.97829431595291,2.37867873366265,0.52091337055676,1.3959149950069,3.37657566019008,2.29197371665215,1.47314292736834,1.42371680799103,2.98239113320481,0.151452386666368,0.302286240427142,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0.502666365318702,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.11981512450592,0,0,2.39665023047716,4.11750542536764,6.65968066198181,2.08589184230732,2.30143911597297,2.28566849015516,2.75810147215188,0.407357455401265,0.248813941220186,0.252722758433675,0,0.390361328888111,0.229902104433473,0.360124259610698,0.452114453507145,0.884474488967262,1.0249097622788,1.03071897015702,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0.329119699826961,0.656669856316381,0.0810688095458557,1.02339991197733,0.219550115291051,0.268412837520744,1.47202963994889,2.57261530948211,0,0,0.639864751605702,0,0.515469845288373,0,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.420814919341911,0.632365371242573,0.442830443938806,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.945810864637146,0.221464689648775,0.637819074629948,0,0.690739927463582,0,0,0.54390568381871,0.491764273019036,0,2.40825884981688,1.28932855251423,0.491804836130026,0.757412781613119,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,2.24924921495265,0.425820255624806,0.178065603667255,0.977321756121456,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0.709360934569094,0.891844088010353,0.822745103010605,1.2178597964584,0,0.21183207086382,0.441056796109924,0.32977250588296,0.161464426695906,0.301564624640779,0.119372344003136,0.656563598980245,0.291480836629851,2.41052892613663,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0.139951452323658,0.414599921413271,0.954670618015114,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,0,0.259229946583586,0.621339313086926,0.56369293868419,0,0.165458490457098,0.777804753376191,0.645799117388655,0.675824501963113,0.821500670520278,0.651021924219751,0.838874755405687,0.966336483304024,0.576060012515731,0.948033361884535,0.608175645870493,0.513554785824136,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.504130925684203,0.292373642219257,0.288635524920988,0.701261413089414,0.680191150845634,0,0,0.503653849092235,0,0,0.549454872801795,0.214368379079066,0,1.6942555278512,2.30162618253588,2.29158205375759,1.20297227640581,0.685082519770642,0.755393897389701,0,2.70192721934532,2.71885445390523,2.5888015587591,0.518936737920883,0.399024873401031,1.02440163452481,0.243106717068294,0.419226325255965,0.735374033800057,0,0,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.37456602987953,0.320125762024346,0.402048282689293,0.952587382566147,0.463537303779422,0,1.23625770240992,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.0941093804153306,1.01537529470012,0.182927972872773,0.789209134313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| |||
|short_description=p3@Fbxo25 | |||
}} |
Revision as of 15:15, 14 September 2013
Short description: | p3@Fbxo25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fbxo25_5end |
Coexpression cluster: | MCL_coexpression_mm9:794 |
Association with transcript: | -57bp_to_ENSMUST00000098917_5end |
EntrezGene: | Fbxo25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.42e-30 | 23 |
neuroblast (sensu Vertebrata) | 7.42e-30 | 23 |
neuron | 8.45e-19 | 33 |
neuronal stem cell | 8.45e-19 | 33 |
neuroblast | 8.45e-19 | 33 |
electrically signaling cell | 8.45e-19 | 33 |
neural cell | 1.54e-15 | 43 |
ectodermal cell | 4.98e-15 | 44 |
neurectodermal cell | 4.98e-15 | 44 |
electrically responsive cell | 6.40e-15 | 39 |
electrically active cell | 6.40e-15 | 39 |
neuron of cerebral cortex | 4.19e-10 | 6 |
embryonic cell | 7.48e-10 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.