FFCP PHASE1:Mm9::chr7:72948786..72948804,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503969|HGNC=|MCL_coexpression_id=73|UniProt=|association_with_transcript=-133bp_to_NR_045301,uc009hgv.1_5end|description=CAGE_peak_3_at_1810008I18Rik_5end|id=chr7:72948786..72948804,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.58e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.02e-19!22;UBERON:0007499!1.02e-19!22;UBERON:0006925!1.02e-19!22;UBERON:0009497!1.02e-19!22;UBERON:0000015!1.02e-19!22;UBERON:0002423!1.02e-19!22;UBERON:0006235!1.02e-19!22;UBERON:0008835!1.02e-19!22;UBERON:0003894!1.02e-19!22;UBERON:0004161!1.02e-19!22;UBERON:0008836!1.02e-19!22;UBERON:0009854!1.42e-18!23;UBERON:0009856!1.42e-18!23;UBERON:0002365!1.45e-16!25;UBERON:0002330!1.45e-16!25;UBERON:0000949!9.78e-12!72;UBERON:0001264!5.86e-10!12;UBERON:0003922!5.86e-10!12;UBERON:0002114!5.86e-10!12;UBERON:0003923!5.86e-10!12;UBERON:0003924!5.86e-10!12;UBERON:0003921!5.86e-10!12;UBERON:0005177!9.03e-10!85;UBERON:0005172!2.90e-09!49;UBERON:0005173!2.90e-09!49;UBERON:0002417!2.90e-09!49;UBERON:0000916!2.90e-09!49;UBERON:0005256!3.80e-09!47;UBERON:0001045!5.58e-09!13;UBERON:0004921!9.54e-09!126;UBERON:0004185!9.54e-09!126;UBERON:0001007!2.01e-08!128;UBERON:0001555!2.01e-08!128;UBERON:0007026!2.01e-08!128;UBERON:0000466!2.15e-08!79;UBERON:0002108!4.09e-08!16;UBERON:0004119!4.14e-08!130;UBERON:0000925!4.14e-08!130;UBERON:0006595!4.14e-08!130;UBERON:0001041!9.67e-08!92;UBERON:0002100!3.42e-07!98;UBERON:0000160!4.10e-07!43;UBERON:0000077!7.18e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.38e-32,22;UBERON:0007499,6.38e-32,22;UBERON:0006925,6.38e-32,22;UBERON:0009497,6.38e-32,22;UBERON:0000015,6.38e-32,22;UBERON:0002423,6.38e-32,22;UBERON:0006235,6.38e-32,22;UBERON:0008835,6.38e-32,22;UBERON:0003894,6.38e-32,22;UBERON:0004161,6.38e-32,22;UBERON:0008836,6.38e-32,22;UBERON:0009854,2.21e-30,23;UBERON:0009856,2.21e-30,23;UBERON:0002365,1.13e-27,25;UBERON:0002330,1.13e-27,25;UBERON:0000949,2.34e-19,72;UBERON:0005177,3.36e-17,79;UBERON:0001264,8.46e-15,12;UBERON:0002100,1.74e-14,90;UBERON:0005256,7.95e-14,45;UBERON:0003914,4.32e-13,47;UBERON:0005172,2.05e-12,49;UBERON:0005173,2.05e-12,49;UBERON:0002417,2.05e-12,49;UBERON:0000916,2.05e-12,49;UBERON:0003929,1.10e-10,55;UBERON:0002368,1.64e-09,60;UBERON:0003104,2.67e-09,61;UBERON:0009142,2.67e-09,61;UBERON:0002075,7.09e-09,19;UBERON:0002530,1.61e-08,65;UBERON:0000490,2.44e-08,66;UBERON:0009569,2.44e-08,66;UBERON:0005911,7.87e-08,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9752595713299,5.439770669662,52.3512095888683,4.54843492213368,9.85659151614138,3.65155492342555,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,1.42358718463353,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,7.11486305009157,0,0,0.449724224769707,0.405720242777006,0.964708639009667,2.29163266603278,8.63088412352432,1.13494658742525,2.74561413188081,7.18841032636773,4.09355042435354,3.74445207737473,3.78868316920668,31.0357525392908,2.41221760681684,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,15.9294166007955,0,0.302323556964751,1.13163047853539,1.77181135728464,4.30409207121498,0.258428293168221,0,1.42598951353889,8.84902922220285,16.8669773719998,10.3135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0,1.12369808963859,0.384150914429216,0.689225627467359,0,0.463537303779422,0,0,0.294397840268795,0,0.532427418478012,0.715308569841963,0.290692833264657,0.846984423737976,0.507687647350059,0.365855945745545,1.31534855718921,0.543216455383447,1.12228454331548,0.593175090620871,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0.935726433781634,0,0,0,0|short_description=p3@1810008I18Rik}} | ||
|EntrezGene=100503969 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt= | |||
|association_with_transcript=-133bp_to_NR_045301,uc009hgv.1_5end | |||
|description=CAGE_peak_3_at_1810008I18Rik_5end | |||
|id=chr7:72948786..72948804,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.58e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.02e-19!22;UBERON:0007499!1.02e-19!22;UBERON:0006925!1.02e-19!22;UBERON:0009497!1.02e-19!22;UBERON:0000015!1.02e-19!22;UBERON:0002423!1.02e-19!22;UBERON:0006235!1.02e-19!22;UBERON:0008835!1.02e-19!22;UBERON:0003894!1.02e-19!22;UBERON:0004161!1.02e-19!22;UBERON:0008836!1.02e-19!22;UBERON:0009854!1.42e-18!23;UBERON:0009856!1.42e-18!23;UBERON:0002365!1.45e-16!25;UBERON:0002330!1.45e-16!25;UBERON:0000949!9.78e-12!72;UBERON:0001264!5.86e-10!12;UBERON:0003922!5.86e-10!12;UBERON:0002114!5.86e-10!12;UBERON:0003923!5.86e-10!12;UBERON:0003924!5.86e-10!12;UBERON:0003921!5.86e-10!12;UBERON:0005177!9.03e-10!85;UBERON:0005172!2.90e-09!49;UBERON:0005173!2.90e-09!49;UBERON:0002417!2.90e-09!49;UBERON:0000916!2.90e-09!49;UBERON:0005256!3.80e-09!47;UBERON:0001045!5.58e-09!13;UBERON:0004921!9.54e-09!126;UBERON:0004185!9.54e-09!126;UBERON:0001007!2.01e-08!128;UBERON:0001555!2.01e-08!128;UBERON:0007026!2.01e-08!128;UBERON:0000466!2.15e-08!79;UBERON:0002108!4.09e-08!16;UBERON:0004119!4.14e-08!130;UBERON:0000925!4.14e-08!130;UBERON:0006595!4.14e-08!130;UBERON:0001041!9.67e-08!92;UBERON:0002100!3.42e-07!98;UBERON:0000160!4.10e-07!43;UBERON:0000077!7.18e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.38e-32,22;UBERON:0007499,6.38e-32,22;UBERON:0006925,6.38e-32,22;UBERON:0009497,6.38e-32,22;UBERON:0000015,6.38e-32,22;UBERON:0002423,6.38e-32,22;UBERON:0006235,6.38e-32,22;UBERON:0008835,6.38e-32,22;UBERON:0003894,6.38e-32,22;UBERON:0004161,6.38e-32,22;UBERON:0008836,6.38e-32,22;UBERON:0009854,2.21e-30,23;UBERON:0009856,2.21e-30,23;UBERON:0002365,1.13e-27,25;UBERON:0002330,1.13e-27,25;UBERON:0000949,2.34e-19,72;UBERON:0005177,3.36e-17,79;UBERON:0001264,8.46e-15,12;UBERON:0002100,1.74e-14,90;UBERON:0005256,7.95e-14,45;UBERON:0003914,4.32e-13,47;UBERON:0005172,2.05e-12,49;UBERON:0005173,2.05e-12,49;UBERON:0002417,2.05e-12,49;UBERON:0000916,2.05e-12,49;UBERON:0003929,1.10e-10,55;UBERON:0002368,1.64e-09,60;UBERON:0003104,2.67e-09,61;UBERON:0009142,2.67e-09,61;UBERON:0002075,7.09e-09,19;UBERON:0002530,1.61e-08,65;UBERON:0000490,2.44e-08,66;UBERON:0009569,2.44e-08,66;UBERON:0005911,7.87e-08,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9752595713299,5.439770669662,52.3512095888683,4.54843492213368,9.85659151614138,3.65155492342555,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,1.42358718463353,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,7.11486305009157,0,0,0.449724224769707,0.405720242777006,0.964708639009667,2.29163266603278,8.63088412352432,1.13494658742525,2.74561413188081,7.18841032636773,4.09355042435354,3.74445207737473,3.78868316920668,31.0357525392908,2.41221760681684,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,15.9294166007955,0,0.302323556964751,1.13163047853539,1.77181135728464,4.30409207121498,0.258428293168221,0,1.42598951353889,8.84902922220285,16.8669773719998,10.3135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0,1.12369808963859,0.384150914429216,0.689225627467359,0,0.463537303779422,0,0,0.294397840268795,0,0.532427418478012,0.715308569841963,0.290692833264657,0.846984423737976,0.507687647350059,0.365855945745545,1.31534855718921,0.543216455383447,1.12228454331548,0.593175090620871,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0.935726433781634,0,0,0,0 | |||
|short_description=p3@1810008I18Rik | |||
}} |
Revision as of 14:05, 14 September 2013
Short description: | p3@1810008I18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1810008I18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | -133bp_to_NR_045301, uc009hgv.1_5end |
EntrezGene: | 1810008I18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.58e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 6.38e-32 | 22 |
epithelial sac | 6.38e-32 | 22 |
digestive gland | 6.38e-32 | 22 |
epithelium of foregut-midgut junction | 6.38e-32 | 22 |
anatomical boundary | 6.38e-32 | 22 |
hepatobiliary system | 6.38e-32 | 22 |
foregut-midgut junction | 6.38e-32 | 22 |
hepatic diverticulum | 6.38e-32 | 22 |
liver primordium | 6.38e-32 | 22 |
septum transversum | 6.38e-32 | 22 |
liver bud | 6.38e-32 | 22 |
digestive tract diverticulum | 2.21e-30 | 23 |
sac | 2.21e-30 | 23 |
exocrine gland | 1.13e-27 | 25 |
exocrine system | 1.13e-27 | 25 |
endocrine system | 2.34e-19 | 72 |
trunk region element | 3.36e-17 | 79 |
pancreas | 8.46e-15 | 12 |
trunk | 1.74e-14 | 90 |
trunk mesenchyme | 7.95e-14 | 45 |
epithelial tube | 4.32e-13 | 47 |
abdomen element | 2.05e-12 | 49 |
abdominal segment element | 2.05e-12 | 49 |
abdominal segment of trunk | 2.05e-12 | 49 |
abdomen | 2.05e-12 | 49 |
gut epithelium | 1.10e-10 | 55 |
endocrine gland | 1.64e-09 | 60 |
mesenchyme | 2.67e-09 | 61 |
entire embryonic mesenchyme | 2.67e-09 | 61 |
viscus | 7.09e-09 | 19 |
gland | 1.61e-08 | 65 |
unilaminar epithelium | 2.44e-08 | 66 |
subdivision of trunk | 2.44e-08 | 66 |
endo-epithelium | 7.87e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.