FFCP PHASE1:Mm9::chr7:53128537..53128557,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68137|HGNC=|MCL_coexpression_id=207|UniProt=D3YUA0|association_with_transcript=40bp_to_ENSMUST00000107718_5end|description=CAGE_peak_3_at_Kdelr1_5end|id=chr7:53128537..53128557,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,3.75e-09,25;CL:0000223,1.94e-08,20;CL:0002563,2.80e-07,9;CL:0002251,2.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.63e-19!43;UBERON:0005409!8.87e-16!59;UBERON:0004119!3.63e-13!130;UBERON:0000925!3.63e-13!130;UBERON:0006595!3.63e-13!130;UBERON:0001007!4.57e-13!128;UBERON:0001555!4.57e-13!128;UBERON:0007026!4.57e-13!128;UBERON:0004921!4.45e-12!126;UBERON:0004185!4.45e-12!126;UBERON:0002365!3.14e-11!25;UBERON:0002330!3.14e-11!25;UBERON:0009854!6.95e-11!23;UBERON:0009856!6.95e-11!23;UBERON:0002107!1.75e-10!22;UBERON:0007499!1.75e-10!22;UBERON:0006925!1.75e-10!22;UBERON:0009497!1.75e-10!22;UBERON:0000015!1.75e-10!22;UBERON:0002423!1.75e-10!22;UBERON:0006235!1.75e-10!22;UBERON:0008835!1.75e-10!22;UBERON:0003894!1.75e-10!22;UBERON:0004161!1.75e-10!22;UBERON:0008836!1.75e-10!22;UBERON:0000344!2.52e-09!15;UBERON:0001242!4.29e-08!13;UBERON:0000060!4.29e-08!13;UBERON:0001262!4.29e-08!13;UBERON:0004786!4.29e-08!13;UBERON:0005172!1.73e-07!49;UBERON:0005173!1.73e-07!49;UBERON:0002417!1.73e-07!49;UBERON:0000916!1.73e-07!49;UBERON:0005256!4.39e-07!47;UBERON:0002100!5.55e-07!98;UBERON:0005177!9.29e-07!85;UBERON:0002108!9.71e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-18,31;UBERON:0002365,1.13e-13,25;UBERON:0002330,1.13e-13,25;UBERON:0009854,3.06e-13,23;UBERON:0009856,3.06e-13,23;UBERON:0005409,4.41e-13,47;UBERON:0002107,9.77e-13,22;UBERON:0007499,9.77e-13,22;UBERON:0006925,9.77e-13,22;UBERON:0009497,9.77e-13,22;UBERON:0000015,9.77e-13,22;UBERON:0002423,9.77e-13,22;UBERON:0006235,9.77e-13,22;UBERON:0008835,9.77e-13,22;UBERON:0003894,9.77e-13,22;UBERON:0004161,9.77e-13,22;UBERON:0008836,9.77e-13,22;UBERON:0000344,2.74e-11,15;UBERON:0001007,1.10e-10,116;UBERON:0001555,1.10e-10,116;UBERON:0007026,1.10e-10,116;UBERON:0004119,1.47e-10,118;UBERON:0000925,1.47e-10,118;UBERON:0006595,1.47e-10,118;UBERON:0001242,9.51e-10,13;UBERON:0001262,9.51e-10,13;UBERON:0004786,9.51e-10,13;UBERON:0004921,1.14e-09,114;UBERON:0003104,2.33e-08,61;UBERON:0009142,2.33e-08,61;UBERON:0005256,3.98e-08,45;UBERON:0002100,4.40e-08,90;UBERON:0005177,2.16e-07,79;UBERON:0005172,2.38e-07,49;UBERON:0005173,2.38e-07,49;UBERON:0002417,2.38e-07,49;UBERON:0000916,2.38e-07,49;UBERON:0003350,2.80e-07,9;UBERON:0004808,2.80e-07,9;UBERON:0001277,2.80e-07,9|phase1_expression=0,19.8915982354436,22.7499619694768,12.40103266358,11.0197060588196,9.23335995515394,8.41005506143892,0.129123323441576,0.84473233291,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.411343300817216,0.42438965179803,1.36069264241712,0.397163804803541,0.261199789138935,13.9193407830264,14.2233754261645,16.6527269593356,17.6612418425221,16.3758136841276,7.60093677825496,7.30887376303799,6.43018480900384,0,0,0,5.77703239502549,6.64938581433969,4.08338712524738,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,1.76255545165808,1.52065396829272,1.28482726513177,0,1.09012578190223,1.31811709640683,1.36100929351998,0.279972843250725,1.43752564364972,0,0,0.336093799142464,2.57259436035947,1.71920063963254,2.57836046138721,0.202316460859598,0,0,1.35537812827653,0,0,0,2.1314403448383,0,0.768436610643109,0,0.135005938331691,0.210324961351382,0.571301968807607,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.302904773332736,0.302286240427142,1.73918693221007,13.7667820317022,5.439770669662,23.746940432064,30.5394916200404,31.8099089839108,6.31999890592883,0.681721290312231,1.03914401841148,1.41335829804136,0.704217098883403,0,0,0,2.81438353314578,1.52015919285059,1.51657333504435,11.3042040921869,0.258937883647172,1.48442139064825,0.693941307064543,0.304465478312141,1.15307748628029,0.452167921657868,0.587943535678524,1.38233250462643,0.494389935468748,2.16899035379867,0,1.13236794963186,1.10420759230197,0.969750506270444,5.59175283654366,0,0,8.17462576667492,0.11981512450592,1.19980546198682,0.635351135365324,0,0.915001205637253,0.251308704225729,0.347648640384553,0,0.41557608911912,0.324482526135515,0.305518091550949,0.746441823660558,0.505445516867349,0.420883711772948,0.390361328888111,1.37941262660084,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0.567318240503458,0.703804496655795,1.09597866213787,0.834141747676794,0,0.61734640922383,0.59710280045548,0.702213187313235,0,0,1.24275463521301,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.583826711835847,0.822799249567402,0.656669856316381,0.891756905004413,0.584799949701329,0.878200461164203,0.402619256281115,0,0.102904612379284,17.5121954981413,10.3135720998782,1.066441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| ||
|EntrezGene=68137 | |||
|HGNC= | |||
|MCL_coexpression_id=207 | |||
|UniProt=D3YUA0 | |||
|association_with_transcript=40bp_to_ENSMUST00000107718_5end | |||
|description=CAGE_peak_3_at_Kdelr1_5end | |||
|id=chr7:53128537..53128557,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.75e-09,25;CL:0000223,1.94e-08,20;CL:0002563,2.80e-07,9;CL:0002251,2.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.63e-19!43;UBERON:0005409!8.87e-16!59;UBERON:0004119!3.63e-13!130;UBERON:0000925!3.63e-13!130;UBERON:0006595!3.63e-13!130;UBERON:0001007!4.57e-13!128;UBERON:0001555!4.57e-13!128;UBERON:0007026!4.57e-13!128;UBERON:0004921!4.45e-12!126;UBERON:0004185!4.45e-12!126;UBERON:0002365!3.14e-11!25;UBERON:0002330!3.14e-11!25;UBERON:0009854!6.95e-11!23;UBERON:0009856!6.95e-11!23;UBERON:0002107!1.75e-10!22;UBERON:0007499!1.75e-10!22;UBERON:0006925!1.75e-10!22;UBERON:0009497!1.75e-10!22;UBERON:0000015!1.75e-10!22;UBERON:0002423!1.75e-10!22;UBERON:0006235!1.75e-10!22;UBERON:0008835!1.75e-10!22;UBERON:0003894!1.75e-10!22;UBERON:0004161!1.75e-10!22;UBERON:0008836!1.75e-10!22;UBERON:0000344!2.52e-09!15;UBERON:0001242!4.29e-08!13;UBERON:0000060!4.29e-08!13;UBERON:0001262!4.29e-08!13;UBERON:0004786!4.29e-08!13;UBERON:0005172!1.73e-07!49;UBERON:0005173!1.73e-07!49;UBERON:0002417!1.73e-07!49;UBERON:0000916!1.73e-07!49;UBERON:0005256!4.39e-07!47;UBERON:0002100!5.55e-07!98;UBERON:0005177!9.29e-07!85;UBERON:0002108!9.71e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-18,31;UBERON:0002365,1.13e-13,25;UBERON:0002330,1.13e-13,25;UBERON:0009854,3.06e-13,23;UBERON:0009856,3.06e-13,23;UBERON:0005409,4.41e-13,47;UBERON:0002107,9.77e-13,22;UBERON:0007499,9.77e-13,22;UBERON:0006925,9.77e-13,22;UBERON:0009497,9.77e-13,22;UBERON:0000015,9.77e-13,22;UBERON:0002423,9.77e-13,22;UBERON:0006235,9.77e-13,22;UBERON:0008835,9.77e-13,22;UBERON:0003894,9.77e-13,22;UBERON:0004161,9.77e-13,22;UBERON:0008836,9.77e-13,22;UBERON:0000344,2.74e-11,15;UBERON:0001007,1.10e-10,116;UBERON:0001555,1.10e-10,116;UBERON:0007026,1.10e-10,116;UBERON:0004119,1.47e-10,118;UBERON:0000925,1.47e-10,118;UBERON:0006595,1.47e-10,118;UBERON:0001242,9.51e-10,13;UBERON:0001262,9.51e-10,13;UBERON:0004786,9.51e-10,13;UBERON:0004921,1.14e-09,114;UBERON:0003104,2.33e-08,61;UBERON:0009142,2.33e-08,61;UBERON:0005256,3.98e-08,45;UBERON:0002100,4.40e-08,90;UBERON:0005177,2.16e-07,79;UBERON:0005172,2.38e-07,49;UBERON:0005173,2.38e-07,49;UBERON:0002417,2.38e-07,49;UBERON:0000916,2.38e-07,49;UBERON:0003350,2.80e-07,9;UBERON:0004808,2.80e-07,9;UBERON:0001277,2.80e-07,9 | |||
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| |||
|short_description=p3@Kdelr1 | |||
}} |
Revision as of 13:49, 14 September 2013
Short description: | p3@Kdelr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kdelr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | 40bp_to_ENSMUST00000107718_5end |
EntrezGene: | Kdelr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.75e-09 | 25 |
endodermal cell | 1.94e-08 | 20 |
intestinal epithelial cell | 2.80e-07 | 9 |
epithelial cell of alimentary canal | 2.80e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.