Personal tools

FFCP PHASE1:Mm9::chr7:52589103..52589121,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=68667|HGNC=|MCL_coexpression_id=12|UniProt=D3Z0P5|association_with_transcript=0bp_to_ENSMUST00000107784_5end|description=CAGE_peak_2_at_Trpm4_5end|id=chr7:52589103..52589121,-|ontology_enrichment_celltype=CL:0002563!6.13e-07!9;CL:0002251!6.13e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.51e-08,9;CL:0002251,1.51e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.65e-21!59;UBERON:0000160!1.74e-20!43;UBERON:0000344!1.33e-10!15;UBERON:0004119!6.64e-10!130;UBERON:0000925!6.64e-10!130;UBERON:0006595!6.64e-10!130;UBERON:0001007!7.68e-10!128;UBERON:0001555!7.68e-10!128;UBERON:0007026!7.68e-10!128;UBERON:0001242!1.53e-09!13;UBERON:0000060!1.53e-09!13;UBERON:0001262!1.53e-09!13;UBERON:0004786!1.53e-09!13;UBERON:0004921!4.66e-09!126;UBERON:0004185!4.66e-09!126;UBERON:0003350!6.13e-07!9;UBERON:0004808!6.13e-07!9;UBERON:0001277!6.13e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.99e-24,31;UBERON:0005409,1.30e-23,47;UBERON:0000344,2.69e-13,15;UBERON:0001242,6.40e-12,13;UBERON:0001262,6.40e-12,13;UBERON:0004786,6.40e-12,13;UBERON:0001007,1.02e-11,116;UBERON:0001555,1.02e-11,116;UBERON:0007026,1.02e-11,116;UBERON:0004119,3.88e-11,118;UBERON:0000925,3.88e-11,118;UBERON:0006595,3.88e-11,118;UBERON:0004921,1.02e-10,114;UBERON:0003350,1.51e-08,9;UBERON:0004808,1.51e-08,9;UBERON:0001277,1.51e-08,9|phase1_expression=0.960893082628764,14.6569671208532,10.9199817453489,41.4375969490357,33.5600139064053,10.2406355866253,9.1108929832255,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,1.61582251287033,0.297872853602656,0,7.83962871687693,8.25873411841812,13.2073351746455,12.0613358924541,8.61884930743556,36.8645433745365,24.4469225867133,10.4213340007993,0,0,0,11.554064790051,5.98444723290572,8.77928231928187,0.418531630736908,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0.441737081903227,0,0.479227355091182,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0,0.377857800533928,0.869593466105033,0,0,0,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0,0.845060518660083,1.28326477414318,0,0,0.865964164044856,0.760079596425296,0.505524445014783,2.74041311325744,0,0.29688427812965,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.741584903203122,0.433798070759735,0,0.970601099684455,0.220841518460394,0.484875253135222,39.1422698558057,0,0,16.6047085885584,0.599075622529601,0,0.635351135365324,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0,0,1.52759045775474,0.870848794270651,1.26361379216837,0.631325567659422,1.17108398666433,0.229902104433473,0,0.753524089178575,0.95251098811859,0.768682321709099,0.468508622798644,0.776110112217047,0.215567992932842,0.756424320671277,1.05570674498369,0.657587197282725,1.39023624612799,0.696504333044333,1.4404749548556,0.796137067273973,0.702213187313235,0.257347907114715,0,1.03562886267751,0.938104239924385,0.900310307305074,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,1.3413670069981,0.934122738937356,0.987359099480883,0.820837320395476,1.05389452409612,2.19299981137998,1.09775057645525,0.939444931322602,0,0.102904612379284,14.5384264512871,7.1401652999157,1.06644125267617,1.85789337488351,2.96395161040815,3.42861991859682,3.55804870151792,5.51654315726422,11.8632265386128,6.42325923423642,8.29406189040889,8.15721535368718,8.96834800747953,11.6846523125049,13.8328351919804,16.3295844068581,0.948339504765408,1.37098215131675,0,1.22190796707189,0.775809948670503,1.1221731182451,1.26473074248515,0.442830443938806,0.941992367048249,1.1105744752962,0.296452627087149,0.166845105716094,0,0,0,0,0,0,1.29708181420028,0,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,0.179397413521912,0.964887042726734,2.77129785249907,1.13694847062291,0.977789858652155,1.01847051465113,1.17345124144251,2.68010011906905,1.6663054862021,5.26860849216057,2.04925687338048,1.32878813789265,1.75400245523236,2.94953966488328,2.07221978239075,2.4590339958857,0,0,5.90117127622843,3.31124095565679,0.160550589987792,0.234423373184406,0.163934945376675,2.01976741763498,0,0,0,0.238968797952552,0,0,0,0,0,0,0.851640511249612,1.24645922567079,1.62886959353576,3.46437258242324,1.32745138339963,0.971122544619926,2.11626489875326,1.88605079755898,2.06711325016541,2.45948118355142,4.13485269069154,5.45300594216258,4.63446591900138,0.948110273807448,0,3.09406629744561,0,1.26042765821917,2.8458910432206,1.07168517515796,0.886701168211368,1.78368817602071,1.48094118541909,3.04464949114599,0.938686832254841,0.847328283455281,3.52845436887939,2.14352128823924,1.77610869365496,2.0506394475573,1.55184047204077,0.984845398470368,11.0762717919343,0.556275906031529,0.170870880797853,0.619160603889667,0.370389054739423,0.565105371014073,0,0.228778173206523,0.679913719975421,0.839708713941948,1.10559979043539,8.59203556213602,1.58167996790568,2.23651413839534,2.80813886136683,2.50905955217362,3.05707589244649,2.69728692769641,4.71124697634415,5.75863072364865,25.9229946583586,8.07741107013003,0,0.299033092087958,0.992750942742586,0.583353565032143,1.16243841129958,0.675824501963113,0.821500670520278,0.911430693907651,0.314578033277133,0.241584120826006,1.15212002503146,0.316011120628178,1.01362607645082,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,4.98806843953465,0.887943813496259,0.179427713218951,0.839423081820392,1.54551675225752,0.750729901804728,3.6630324853453,3.64426244434412,4.51414893631827,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.103787347584177,1.99512436700516,0.682934423016537,0.972426868273176,1.04806581313991,1.10306105070008,0.666740183404846,0.824140228955577,1.60459604795908,0.505394423527595,0.760437899670719,1.32038438970253,1.40462261204824,1.47257850531199,1.20614484806788,1.90517476513229,1.27472758539341,0.578727661391115,1.64834360321323,1.61918812147837,1.37147700954166,1.24233064311536,0.715308569841963,1.30811774969096,1.2234219453993,1.09998990259179,0.914639864363863,1.57841826862706,1.49384525230448,1.12228454331548,1.42362021749009,0.492522411877817,1.22769312950907,1.70430525304563,0.964533054905707,1.24905288968973,0.701794825336225,1.28922632428979,1.72159498861959,1.10295709559758,1.39120701372253|short_description=p2@Trpm4}}
|EntrezGene=68667
|HGNC=
|MCL_coexpression_id=12
|UniProt=D3Z0P5
|association_with_transcript=0bp_to_ENSMUST00000107784_5end
|description=CAGE_peak_2_at_Trpm4_5end
|id=chr7:52589103..52589121,-
|ontology_enrichment_celltype=CL:0002563!6.13e-07!9;CL:0002251!6.13e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,1.51e-08,9;CL:0002251,1.51e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!4.65e-21!59;UBERON:0000160!1.74e-20!43;UBERON:0000344!1.33e-10!15;UBERON:0004119!6.64e-10!130;UBERON:0000925!6.64e-10!130;UBERON:0006595!6.64e-10!130;UBERON:0001007!7.68e-10!128;UBERON:0001555!7.68e-10!128;UBERON:0007026!7.68e-10!128;UBERON:0001242!1.53e-09!13;UBERON:0000060!1.53e-09!13;UBERON:0001262!1.53e-09!13;UBERON:0004786!1.53e-09!13;UBERON:0004921!4.66e-09!126;UBERON:0004185!4.66e-09!126;UBERON:0003350!6.13e-07!9;UBERON:0004808!6.13e-07!9;UBERON:0001277!6.13e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.99e-24,31;UBERON:0005409,1.30e-23,47;UBERON:0000344,2.69e-13,15;UBERON:0001242,6.40e-12,13;UBERON:0001262,6.40e-12,13;UBERON:0004786,6.40e-12,13;UBERON:0001007,1.02e-11,116;UBERON:0001555,1.02e-11,116;UBERON:0007026,1.02e-11,116;UBERON:0004119,3.88e-11,118;UBERON:0000925,3.88e-11,118;UBERON:0006595,3.88e-11,118;UBERON:0004921,1.02e-10,114;UBERON:0003350,1.51e-08,9;UBERON:0004808,1.51e-08,9;UBERON:0001277,1.51e-08,9
|phase1_expression=0.960893082628764,14.6569671208532,10.9199817453489,41.4375969490357,33.5600139064053,10.2406355866253,9.1108929832255,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,1.61582251287033,0.297872853602656,0,7.83962871687693,8.25873411841812,13.2073351746455,12.0613358924541,8.61884930743556,36.8645433745365,24.4469225867133,10.4213340007993,0,0,0,11.554064790051,5.98444723290572,8.77928231928187,0.418531630736908,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0.441737081903227,0,0.479227355091182,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0,0.377857800533928,0.869593466105033,0,0,0,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0,0.845060518660083,1.28326477414318,0,0,0.865964164044856,0.760079596425296,0.505524445014783,2.74041311325744,0,0.29688427812965,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.741584903203122,0.433798070759735,0,0.970601099684455,0.220841518460394,0.484875253135222,39.1422698558057,0,0,16.6047085885584,0.599075622529601,0,0.635351135365324,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0,0,1.52759045775474,0.870848794270651,1.26361379216837,0.631325567659422,1.17108398666433,0.229902104433473,0,0.753524089178575,0.95251098811859,0.768682321709099,0.468508622798644,0.776110112217047,0.215567992932842,0.756424320671277,1.05570674498369,0.657587197282725,1.39023624612799,0.696504333044333,1.4404749548556,0.796137067273973,0.702213187313235,0.257347907114715,0,1.03562886267751,0.938104239924385,0.900310307305074,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,1.3413670069981,0.934122738937356,0.987359099480883,0.820837320395476,1.05389452409612,2.19299981137998,1.09775057645525,0.939444931322602,0,0.102904612379284,14.5384264512871,7.1401652999157,1.06644125267617,1.85789337488351,2.96395161040815,3.42861991859682,3.55804870151792,5.51654315726422,11.8632265386128,6.42325923423642,8.29406189040889,8.15721535368718,8.96834800747953,11.6846523125049,13.8328351919804,16.3295844068581,0.948339504765408,1.37098215131675,0,1.22190796707189,0.775809948670503,1.1221731182451,1.26473074248515,0.442830443938806,0.941992367048249,1.1105744752962,0.296452627087149,0.166845105716094,0,0,0,0,0,0,1.29708181420028,0,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,0.179397413521912,0.964887042726734,2.77129785249907,1.13694847062291,0.977789858652155,1.01847051465113,1.17345124144251,2.68010011906905,1.6663054862021,5.26860849216057,2.04925687338048,1.32878813789265,1.75400245523236,2.94953966488328,2.07221978239075,2.4590339958857,0,0,5.90117127622843,3.31124095565679,0.160550589987792,0.234423373184406,0.163934945376675,2.01976741763498,0,0,0,0.238968797952552,0,0,0,0,0,0,0.851640511249612,1.24645922567079,1.62886959353576,3.46437258242324,1.32745138339963,0.971122544619926,2.11626489875326,1.88605079755898,2.06711325016541,2.45948118355142,4.13485269069154,5.45300594216258,4.63446591900138,0.948110273807448,0,3.09406629744561,0,1.26042765821917,2.8458910432206,1.07168517515796,0.886701168211368,1.78368817602071,1.48094118541909,3.04464949114599,0.938686832254841,0.847328283455281,3.52845436887939,2.14352128823924,1.77610869365496,2.0506394475573,1.55184047204077,0.984845398470368,11.0762717919343,0.556275906031529,0.170870880797853,0.619160603889667,0.370389054739423,0.565105371014073,0,0.228778173206523,0.679913719975421,0.839708713941948,1.10559979043539,8.59203556213602,1.58167996790568,2.23651413839534,2.80813886136683,2.50905955217362,3.05707589244649,2.69728692769641,4.71124697634415,5.75863072364865,25.9229946583586,8.07741107013003,0,0.299033092087958,0.992750942742586,0.583353565032143,1.16243841129958,0.675824501963113,0.821500670520278,0.911430693907651,0.314578033277133,0.241584120826006,1.15212002503146,0.316011120628178,1.01362607645082,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,4.98806843953465,0.887943813496259,0.179427713218951,0.839423081820392,1.54551675225752,0.750729901804728,3.6630324853453,3.64426244434412,4.51414893631827,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.103787347584177,1.99512436700516,0.682934423016537,0.972426868273176,1.04806581313991,1.10306105070008,0.666740183404846,0.824140228955577,1.60459604795908,0.505394423527595,0.760437899670719,1.32038438970253,1.40462261204824,1.47257850531199,1.20614484806788,1.90517476513229,1.27472758539341,0.578727661391115,1.64834360321323,1.61918812147837,1.37147700954166,1.24233064311536,0.715308569841963,1.30811774969096,1.2234219453993,1.09998990259179,0.914639864363863,1.57841826862706,1.49384525230448,1.12228454331548,1.42362021749009,0.492522411877817,1.22769312950907,1.70430525304563,0.964533054905707,1.24905288968973,0.701794825336225,1.28922632428979,1.72159498861959,1.10295709559758,1.39120701372253
|short_description=p2@Trpm4
}}

Revision as of 13:45, 14 September 2013

Short description:p2@Trpm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trpm4_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000107784_5end
EntrezGene:Trpm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trpm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.26
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B936.86
Ileum epithelium, pool2.CNhs13232.10253-104C124.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H716.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I314.54
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F28.16
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G116.33
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I125.92
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.51e-089
epithelial cell of alimentary canal1.51e-089







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:52589103..52589121,-&oldid=3049716"