FFCP PHASE1:Mm9::chr7:4116103..4116178,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58804|HGNC=|MCL_coexpression_id=1998|UniProt=D3Z5F0|association_with_transcript=0bp_to_ENSMUST00000143825_5end|description=CAGE_peak_2_at_Cdc42ep5_5end|id=chr7:4116103..4116178,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.94e-19!59;UBERON:0000160!1.60e-17!43;UBERON:0000344!2.66e-09!15;UBERON:0001007!4.00e-08!128;UBERON:0001555!4.00e-08!128;UBERON:0007026!4.00e-08!128;UBERON:0001242!4.53e-08!13;UBERON:0000060!4.53e-08!13;UBERON:0001262!4.53e-08!13;UBERON:0004786!4.53e-08!13;UBERON:0000464!6.45e-08!57;UBERON:0004119!1.30e-07!130;UBERON:0000925!1.30e-07!130;UBERON:0006595!1.30e-07!130;UBERON:0004921!2.33e-07!126;UBERON:0004185!2.33e-07!126;UBERON:0002108!9.92e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.78e-15,47;UBERON:0000160,2.40e-14,31;UBERON:0000344,2.45e-09,15;UBERON:0001242,4.23e-08,13;UBERON:0001262,4.23e-08,13;UBERON:0004786,4.23e-08,13|phase1_expression=8.16759120234449,35.5954915792148,52.7799117691862,33.5735274550581,35.5635968261907,24.5103736991359,24.2957146219347,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0.999329285446988,0.607425802169478,0,0.157731082679119,0.137114433605739,0.42438965179803,7.73893940374735,0.0992909512008853,0,46.5577950328813,49.0935861483744,46.5127890933166,46.9530575813392,43.3097177698637,81.1400001078717,61.4953516614231,49.0024428548223,6.35030673459631,5.53558308826113,0,28.0186071158736,21.1117999605285,19.3960888449251,0,0,0,0,0,0,14.3522372492158,15.4092935453662,5.50640256485045,50.8554373826225,4.14247797122848,10.9843091367236,5.63846707315422,9.65906309215001,0,0,0,0,29.070316272062,24.9284092746718,26.814948798427,0.606949382578793,1.5869729378161,0,20.3306719241479,19.5644855144451,2.2497492932035,1.97773272513395,5.6838409195688,13.4820049733282,5.76327457982332,0.725827286159344,1.21505344498522,1.89292465216244,5.14171771926846,5.74258206474195,0.367472397644862,0.383381884072945,0,0,0.510749352340751,0.768032666281217,0.923204014111357,0.914876436024097,1.04182674111352,1.95428099300967,1.68828783009504,0.763991238884051,2.06240009831567,3.41692033917847,1.3047961207771,1.66597625333005,8.23730005163962,13.9134954576805,7.74381489283248,8.15965600449301,3.77792234146472,0.649776417447669,2.24013443548668,8.28622078777336,18.2360445158522,23.3807404142582,20.4936953215997,15.3519327556582,19.2489716121477,12.7402619853323,0,13.8554266247177,16.2150313904063,16.6823066854878,11.5325718516251,2.84831672011889,14.9926560455473,19.0833859442749,32.8822716577113,22.1390877365816,20.1968338340514,19.0493705559842,18.7243221081216,13.1013332899218,10.2665543413137,4.42305275974937,9.22071044700232,4.63767188766826,3.87900202508178,48.4618579167118,0.585561594023094,0.628340120440365,51.6023251521355,0,0,0,1.79748767285787,0.915001205637253,0.628271760564322,2.08589184230732,1.79000820131231,1.87009240103604,1.1356888414743,20.5715514977639,6.22034853050465,4.54900965180614,78.2843703897683,5.46505860443356,6.66716102857071,5.94205028357652,6.32960234910003,6.05524842446818,5.12454881139399,4.59138450342671,24.0594134787285,5.6047678162539,8.69887968771969,11.9646764431485,22.5771604400402,20.2974491934686,21.5916343243743,17.4914815946752,13.1362616100206,0,0,0,7.45652781127807,9.61556845922494,8.82304101158973,6.8655973319711,8.06733350164356,7.86762275725629,6.97601834251224,8.31647544338819,9.5747580741079,7.5697530960201,7.22336841948019,5.83695428730161,5.4093995347373,2.41505126820156,5.50246316917524,1.68231958851302,1.54356918568927,50.2236550135373,30.9407162996347,6.18535926552179,11.6118335930219,10.9537342123779,15.1262643467507,18.6797556829691,18.4518857329182,43.6566736620951,35.5749742203864,25.8875265064278,31.2361661104607,21.8359777573415,51.2327062932906,41.9307816756907,62.3312185286169,17.2597789867304,9.82537208443668,14.6520056375005,13.0336849821001,8.72786192254316,9.95928642442524,14.987059298449,7.0852871030209,8.79192875911699,12.3397163921801,3.26097889795864,2.50267658574141,4.12773889737726,5.17182858485164,3.85434230638156,5.30589751455317,4.32863948028414,4.89083433666378,9.40384315295205,4.3929826110093,5.75072826109418,8.18710084870708,7.48890415474945,7.32478746046624,3.94674309748207,12.5435315554475,9.79191907883005,12.3169417650815,10.5927234687317,11.5426658327128,12.6732734075791,17.253144516507,21.9000149615133,16.1960927721973,13.5566223931324,17.717175171902,14.0320196418589,9.01248230936559,7.08008425650172,11.2826265693579,0,0,19.1788066477424,20.1433824802455,2.72936002979246,1.28932855251423,7.70494243270374,6.05930225290495,5.36363973007636,2.34263246577983,4.52389135238878,6.21318874676635,8.02075226696619,5.66153061577665,4.04810701674894,4.9683495844923,4.74345333535828,0.642642632843614,23.9878744001974,25.819512531752,21.6639655940256,14.1874305756381,15.9294166007955,16.0235219862288,19.3487076457441,23.3870298897314,33.959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| ||
|EntrezGene=58804 | |||
|HGNC= | |||
|MCL_coexpression_id=1998 | |||
|UniProt=D3Z5F0 | |||
|association_with_transcript=0bp_to_ENSMUST00000143825_5end | |||
|description=CAGE_peak_2_at_Cdc42ep5_5end | |||
|id=chr7:4116103..4116178,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.94e-19!59;UBERON:0000160!1.60e-17!43;UBERON:0000344!2.66e-09!15;UBERON:0001007!4.00e-08!128;UBERON:0001555!4.00e-08!128;UBERON:0007026!4.00e-08!128;UBERON:0001242!4.53e-08!13;UBERON:0000060!4.53e-08!13;UBERON:0001262!4.53e-08!13;UBERON:0004786!4.53e-08!13;UBERON:0000464!6.45e-08!57;UBERON:0004119!1.30e-07!130;UBERON:0000925!1.30e-07!130;UBERON:0006595!1.30e-07!130;UBERON:0004921!2.33e-07!126;UBERON:0004185!2.33e-07!126;UBERON:0002108!9.92e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.78e-15,47;UBERON:0000160,2.40e-14,31;UBERON:0000344,2.45e-09,15;UBERON:0001242,4.23e-08,13;UBERON:0001262,4.23e-08,13;UBERON:0004786,4.23e-08,13 | |||
|phase1_expression=8.16759120234449,35.5954915792148,52.7799117691862,33.5735274550581,35.5635968261907,24.5103736991359,24.2957146219347,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0.999329285446988,0.607425802169478,0,0.157731082679119,0.137114433605739,0.42438965179803,7.73893940374735,0.0992909512008853,0,46.5577950328813,49.0935861483744,46.5127890933166,46.9530575813392,43.3097177698637,81.1400001078717,61.4953516614231,49.0024428548223,6.35030673459631,5.53558308826113,0,28.0186071158736,21.1117999605285,19.3960888449251,0,0,0,0,0,0,14.3522372492158,15.4092935453662,5.50640256485045,50.8554373826225,4.14247797122848,10.9843091367236,5.63846707315422,9.65906309215001,0,0,0,0,29.070316272062,24.9284092746718,26.814948798427,0.606949382578793,1.5869729378161,0,20.3306719241479,19.5644855144451,2.2497492932035,1.97773272513395,5.6838409195688,13.4820049733282,5.76327457982332,0.725827286159344,1.21505344498522,1.89292465216244,5.14171771926846,5.74258206474195,0.367472397644862,0.383381884072945,0,0,0.510749352340751,0.768032666281217,0.923204014111357,0.914876436024097,1.04182674111352,1.95428099300967,1.68828783009504,0.763991238884051,2.06240009831567,3.41692033917847,1.3047961207771,1.66597625333005,8.23730005163962,13.9134954576805,7.74381489283248,8.15965600449301,3.77792234146472,0.649776417447669,2.24013443548668,8.28622078777336,18.2360445158522,23.3807404142582,20.4936953215997,15.3519327556582,19.2489716121477,12.7402619853323,0,13.8554266247177,16.2150313904063,16.6823066854878,11.5325718516251,2.84831672011889,14.9926560455473,19.0833859442749,32.8822716577113,22.1390877365816,20.1968338340514,19.0493705559842,18.7243221081216,13.1013332899218,10.2665543413137,4.42305275974937,9.22071044700232,4.63767188766826,3.87900202508178,48.4618579167118,0.585561594023094,0.628340120440365,51.6023251521355,0,0,0,1.79748767285787,0.915001205637253,0.628271760564322,2.08589184230732,1.79000820131231,1.87009240103604,1.1356888414743,20.5715514977639,6.22034853050465,4.54900965180614,78.2843703897683,5.46505860443356,6.66716102857071,5.94205028357652,6.32960234910003,6.05524842446818,5.12454881139399,4.59138450342671,24.0594134787285,5.6047678162539,8.69887968771969,11.9646764431485,22.5771604400402,20.2974491934686,21.5916343243743,17.4914815946752,13.1362616100206,0,0,0,7.45652781127807,9.61556845922494,8.82304101158973,6.8655973319711,8.06733350164356,7.86762275725629,6.97601834251224,8.31647544338819,9.5747580741079,7.5697530960201,7.22336841948019,5.83695428730161,5.4093995347373,2.41505126820156,5.50246316917524,1.68231958851302,1.54356918568927,50.2236550135373,30.9407162996347,6.18535926552179,11.6118335930219,10.9537342123779,15.1262643467507,18.6797556829691,18.4518857329182,43.6566736620951,35.5749742203864,25.8875265064278,31.2361661104607,21.8359777573415,51.2327062932906,41.9307816756907,62.3312185286169,17.2597789867304,9.82537208443668,14.6520056375005,13.0336849821001,8.72786192254316,9.95928642442524,14.987059298449,7.0852871030209,8.79192875911699,12.3397163921801,3.26097889795864,2.50267658574141,4.12773889737726,5.17182858485164,3.85434230638156,5.30589751455317,4.32863948028414,4.89083433666378,9.40384315295205,4.3929826110093,5.75072826109418,8.18710084870708,7.48890415474945,7.32478746046624,3.94674309748207,12.5435315554475,9.79191907883005,12.3169417650815,10.5927234687317,11.5426658327128,12.6732734075791,17.253144516507,21.9000149615133,16.1960927721973,13.5566223931324,17.717175171902,14.0320196418589,9.01248230936559,7.08008425650172,11.2826265693579,0,0,19.1788066477424,20.1433824802455,2.72936002979246,1.28932855251423,7.70494243270374,6.05930225290495,5.36363973007636,2.34263246577983,4.52389135238878,6.21318874676635,8.02075226696619,5.66153061577665,4.04810701674894,4.9683495844923,4.74345333535828,0.642642632843614,23.9878744001974,25.819512531752,21.6639655940256,14.1874305756381,15.9294166007955,16.0235219862288,19.3487076457441,23.3870298897314,33.9597176812889,26.4394227231778,18.3484088149437,19.6308213917853,18.1813662976208,14.5376908650475,20.0295356292498,16.5016869197099,18.7241783164583,8.28281032544027,15.1349660025823,13.5032332069903,9.3990323830405,12.3074484145429,12.0120785039548,19.4857567433344,1.40803024838226,2.54198485036584,18.9654422327267,17.9726015706213,21.4747687505554,15.1385441569671,19.4576920725112,17.3989353729765,45.4710105142567,0.370850604021019,2.22132145037209,11.3512777379772,8.14855920426731,3.95573759709851,1.91371918809435,1.14389086603261,0,0,0,70.6456257331184,9.17374381385292,19.7219883113043,23.2211482766873,30.7359795141269,36.903273273104,36.5482378702864,38.1032430893799,41.3574388334767,37.1994973347445,21.1255366449555,5.07323644815771,17.9419855252775,21.3441452689656,21.0007283411571,24.7986861077244,21.9642963138012,20.0680878084239,14.5828911025224,21.0767282295679,12.0792060413003,5.18454011264158,0.948033361884535,9.73081033392788,7.49789987303239,3.63778304337826,3.58053391334963,1.3907694834688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| |||
|short_description=p2@Cdc42ep5 | |||
}} | |||
Revision as of 13:26, 14 September 2013
| Short description: | p2@Cdc42ep5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cdc42ep5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1998 |
| Association with transcript: | 0bp_to_ENSMUST00000143825_5end |
| EntrezGene: | Cdc42ep5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 2.78e-15 | 47 |
| intestine | 2.40e-14 | 31 |
| mucosa | 2.45e-09 | 15 |
| intestinal mucosa | 4.23e-08 | 13 |
| wall of intestine | 4.23e-08 | 13 |
| gastrointestinal system mucosa | 4.23e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
