FFCP PHASE1:Mm9::chr7:31836430..31836441,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57780|HGNC=|MCL_coexpression_id=2|UniProt=P59648|association_with_transcript=31bp_to_NM_022007,uc009ghr.1,uc009ghs.1_5end|description=CAGE_peak_2_at_Fxyd7_5end|id=chr7:31836430..31836441,-|ontology_enrichment_celltype=CL:0000540!6.34e-12!33;CL:0000047!6.34e-12!33;CL:0000031!6.34e-12!33;CL:0000404!6.34e-12!33;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0002319!3.20e-09!43;CL:0000393!4.17e-08!39;CL:0000211!4.17e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-12,23;CL:0000337,1.80e-12,23;CL:0000540,1.39e-09,33;CL:0000047,1.39e-09,33;CL:0000031,1.39e-09,33;CL:0000404,1.39e-09,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39;CL:0002319,3.63e-07,43;CL:0000221,6.73e-07,44;CL:0000133,6.73e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0001017!9.96e-26!73;UBERON:0005743!9.96e-26!73;UBERON:0001049!1.62e-22!52;UBERON:0005068!1.62e-22!52;UBERON:0006241!1.62e-22!52;UBERON:0007135!1.62e-22!52;UBERON:0002346!6.66e-22!71;UBERON:0003075!6.66e-22!71;UBERON:0007284!6.66e-22!71;UBERON:0004121!3.71e-21!102;UBERON:0000924!3.71e-21!102;UBERON:0006601!3.71e-21!102;UBERON:0000955!2.01e-20!50;UBERON:0006238!2.01e-20!50;UBERON:0002616!7.36e-20!49;UBERON:0000033!9.55e-20!63;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.50e-16!40;UBERON:0002780!1.62e-15!39;UBERON:0001890!1.62e-15!39;UBERON:0006240!1.62e-15!39;UBERON:0003056!2.28e-15!49;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0007811!3.94e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0000956!2.22e-09!21;UBERON:0001869!2.22e-09!21;UBERON:0000203!2.22e-09!21;UBERON:0002021!3.99e-09!10;UBERON:0000411!3.99e-09!10;UBERON:0001950!3.99e-09!10;UBERON:0002619!1.15e-08!17;UBERON:0003076!4.83e-07!12;UBERON:0003057!4.83e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-35,54;UBERON:0001017,6.96e-34,73;UBERON:0001049,5.70e-33,52;UBERON:0005068,5.70e-33,52;UBERON:0006241,5.70e-33,52;UBERON:0007135,5.70e-33,52;UBERON:0001016,1.25e-32,75;UBERON:0000955,6.14e-26,47;UBERON:0006238,6.14e-26,47;UBERON:0002616,6.43e-25,46;UBERON:0002346,1.11e-24,64;UBERON:0003075,1.11e-24,64;UBERON:0007284,1.11e-24,64;UBERON:0002020,3.69e-24,34;UBERON:0004121,5.07e-23,95;UBERON:0000924,5.07e-23,95;UBERON:0006601,5.07e-23,95;UBERON:0010371,1.74e-21,73;UBERON:0003080,1.49e-20,40;UBERON:0002780,2.24e-19,39;UBERON:0001890,2.24e-19,39;UBERON:0006240,2.24e-19,39;UBERON:0003528,1.27e-17,29;UBERON:0002791,1.27e-17,29;UBERON:0001893,1.27e-17,29;UBERON:0002021,1.01e-16,10;UBERON:0000411,1.01e-16,10;UBERON:0001950,1.01e-16,10;UBERON:0010314,9.08e-16,92;UBERON:0003056,2.59e-15,49;UBERON:0003076,2.43e-13,12;UBERON:0003057,2.43e-13,12;UBERON:0002619,1.77e-12,17;UBERON:0000956,3.05e-11,21;UBERON:0001869,3.05e-11,21;UBERON:0000203,3.05e-11,21;UBERON:0000025,7.48e-10,114;UBERON:0002240,8.20e-10,6;UBERON:0005174,8.20e-10,6;UBERON:0001137,8.20e-10,6;UBERON:0004111,3.57e-09,122;UBERON:0001948,1.82e-08,5;UBERON:0002315,1.82e-08,5;UBERON:0002420,7.59e-08,8;UBERON:0007245,7.59e-08,8;UBERON:0010009,7.59e-08,8;UBERON:0010011,7.59e-08,8;UBERON:0000454,7.59e-08,8|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.675029691658453,0.420649922702764,19.1386159550548,24.0746709637259,0.734944795289724,0.670918297127655,0.919218786610021,1.10115880999389,3.44755812830007,3.99376986466233,1.58263545276233,0.914876436024097,1.56274011167028,4.18774498502071,3.37657566019008,1.98637722109853,15.3206864446307,12.9558229527184,4.10078780815661,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,5.09288173976397,4.57500602818627,1.7591609295801,17.7300806596122,18.4115129277838,3.32460871295296,4.86723789203273,1.01839363850316,0,0,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.340182495756639,0.896796041993948,0.655912071918102,0.517406741478031,0,0,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,8.83217783969334,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.80673409849337,0.667134131534611,0.570676878337677,0,0.988193728344065,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=57780 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P59648 | |||
|association_with_transcript=31bp_to_NM_022007,uc009ghr.1,uc009ghs.1_5end | |||
|description=CAGE_peak_2_at_Fxyd7_5end | |||
|id=chr7:31836430..31836441,- | |||
|ontology_enrichment_celltype=CL:0000540!6.34e-12!33;CL:0000047!6.34e-12!33;CL:0000031!6.34e-12!33;CL:0000404!6.34e-12!33;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0002319!3.20e-09!43;CL:0000393!4.17e-08!39;CL:0000211!4.17e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-12,23;CL:0000337,1.80e-12,23;CL:0000540,1.39e-09,33;CL:0000047,1.39e-09,33;CL:0000031,1.39e-09,33;CL:0000404,1.39e-09,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39;CL:0002319,3.63e-07,43;CL:0000221,6.73e-07,44;CL:0000133,6.73e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0001017!9.96e-26!73;UBERON:0005743!9.96e-26!73;UBERON:0001049!1.62e-22!52;UBERON:0005068!1.62e-22!52;UBERON:0006241!1.62e-22!52;UBERON:0007135!1.62e-22!52;UBERON:0002346!6.66e-22!71;UBERON:0003075!6.66e-22!71;UBERON:0007284!6.66e-22!71;UBERON:0004121!3.71e-21!102;UBERON:0000924!3.71e-21!102;UBERON:0006601!3.71e-21!102;UBERON:0000955!2.01e-20!50;UBERON:0006238!2.01e-20!50;UBERON:0002616!7.36e-20!49;UBERON:0000033!9.55e-20!63;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.50e-16!40;UBERON:0002780!1.62e-15!39;UBERON:0001890!1.62e-15!39;UBERON:0006240!1.62e-15!39;UBERON:0003056!2.28e-15!49;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0007811!3.94e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0000956!2.22e-09!21;UBERON:0001869!2.22e-09!21;UBERON:0000203!2.22e-09!21;UBERON:0002021!3.99e-09!10;UBERON:0000411!3.99e-09!10;UBERON:0001950!3.99e-09!10;UBERON:0002619!1.15e-08!17;UBERON:0003076!4.83e-07!12;UBERON:0003057!4.83e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-35,54;UBERON:0001017,6.96e-34,73;UBERON:0001049,5.70e-33,52;UBERON:0005068,5.70e-33,52;UBERON:0006241,5.70e-33,52;UBERON:0007135,5.70e-33,52;UBERON:0001016,1.25e-32,75;UBERON:0000955,6.14e-26,47;UBERON:0006238,6.14e-26,47;UBERON:0002616,6.43e-25,46;UBERON:0002346,1.11e-24,64;UBERON:0003075,1.11e-24,64;UBERON:0007284,1.11e-24,64;UBERON:0002020,3.69e-24,34;UBERON:0004121,5.07e-23,95;UBERON:0000924,5.07e-23,95;UBERON:0006601,5.07e-23,95;UBERON:0010371,1.74e-21,73;UBERON:0003080,1.49e-20,40;UBERON:0002780,2.24e-19,39;UBERON:0001890,2.24e-19,39;UBERON:0006240,2.24e-19,39;UBERON:0003528,1.27e-17,29;UBERON:0002791,1.27e-17,29;UBERON:0001893,1.27e-17,29;UBERON:0002021,1.01e-16,10;UBERON:0000411,1.01e-16,10;UBERON:0001950,1.01e-16,10;UBERON:0010314,9.08e-16,92;UBERON:0003056,2.59e-15,49;UBERON:0003076,2.43e-13,12;UBERON:0003057,2.43e-13,12;UBERON:0002619,1.77e-12,17;UBERON:0000956,3.05e-11,21;UBERON:0001869,3.05e-11,21;UBERON:0000203,3.05e-11,21;UBERON:0000025,7.48e-10,114;UBERON:0002240,8.20e-10,6;UBERON:0005174,8.20e-10,6;UBERON:0001137,8.20e-10,6;UBERON:0004111,3.57e-09,122;UBERON:0001948,1.82e-08,5;UBERON:0002315,1.82e-08,5;UBERON:0002420,7.59e-08,8;UBERON:0007245,7.59e-08,8;UBERON:0010009,7.59e-08,8;UBERON:0010011,7.59e-08,8;UBERON:0000454,7.59e-08,8 | |||
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|short_description=p2@Fxyd7 | |||
}} |
Revision as of 13:18, 14 September 2013
Short description: | p2@Fxyd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fxyd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 31bp_to_NM_022007, uc009ghr.1, uc009ghs.1_5end |
EntrezGene: | Fxyd7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.80e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.80e-12 | 23 |
neuron | 1.39e-09 | 33 |
neuronal stem cell | 1.39e-09 | 33 |
neuroblast | 1.39e-09 | 33 |
electrically signaling cell | 1.39e-09 | 33 |
electrically responsive cell | 2.10e-07 | 39 |
electrically active cell | 2.10e-07 | 39 |
neural cell | 3.63e-07 | 43 |
ectodermal cell | 6.73e-07 | 44 |
neurectodermal cell | 6.73e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.