FFCP PHASE1:Mm9::chr7:30066635..30066707,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20733|HGNC=|MCL_coexpression_id=849|UniProt=Q9WU03,Q9D8Q8|association_with_transcript=288bp_to_ENSMUST00000098604,ENSMUST00000108235,ENSMUST00000108236,ENSMUST00000166639,ENSMUST00000171454,NM_001082548,NM_011464,uc009gbk.1,uc009gbl.1,uc009gbm.1_5end|description=CAGE_peak_3_at_Spint2_5end|id=chr7:30066635..30066707,-|ontology_enrichment_celltype=CL:0000066!5.47e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,5.32e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.85e-19!128;UBERON:0001555!3.85e-19!128;UBERON:0007026!3.85e-19!128;UBERON:0004119!8.53e-19!130;UBERON:0000925!8.53e-19!130;UBERON:0006595!8.53e-19!130;UBERON:0004921!5.88e-18!126;UBERON:0004185!5.88e-18!126;UBERON:0000160!8.08e-18!43;UBERON:0005409!2.62e-14!59;UBERON:0000344!4.80e-10!15;UBERON:0001242!7.84e-09!13;UBERON:0000060!7.84e-09!13;UBERON:0001262!7.84e-09!13;UBERON:0004786!7.84e-09!13;UBERON:0002108!1.08e-08!16;UBERON:0000464!4.13e-08!57;UBERON:0000480!2.03e-07!308;UBERON:0000467!2.03e-07!308;UBERON:0002050!3.00e-07!317;UBERON:0005423!3.00e-07!317;UBERON:0000077!6.07e-07!97;UBERON:0001045!7.32e-07!13;UBERON:0000923!8.06e-07!314;UBERON:0005291!8.06e-07!314;UBERON:0006598!8.06e-07!314;UBERON:0002532!8.06e-07!314|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.30e-14,116;UBERON:0001555,8.30e-14,116;UBERON:0007026,8.30e-14,116;UBERON:0004119,1.65e-13,118;UBERON:0000925,1.65e-13,118;UBERON:0006595,1.65e-13,118;UBERON:0004921,8.55e-13,114;UBERON:0000160,2.04e-12,31;UBERON:0000344,4.80e-10,15;UBERON:0005409,2.47e-09,47;UBERON:0001242,7.84e-09,13;UBERON:0001262,7.84e-09,13;UBERON:0004786,7.84e-09,13|phase1_expression=53.649863780106,175.185654634959,219.764632625146,136.41135929938,146.76244887428,162.339255938797,164.696911619846,48.6794929374743,38.5761098695567,53.1326474750925,49.4819928171709,58.2336760665956,26.0225109495433,36.4543078087219,18.9872564234928,10.3262386368811,9.79386629379405,13.8803352757625,14.2599010949968,14.8536378129311,94.1429221972342,62.1561354517542,70.7851428566515,175.031710535987,239.96210799626,256.107455995299,245.965099806832,202.973901190107,295.106370415749,250.517948981371,341.464986409169,1.27006134691926,3.69038872550742,0,181.109965584049,201.310155529134,193.960888449251,9.62622750694888,9.37602413428561,7.32933241563318,11.1763982725893,10.9287277593351,12.1377588257788,1.38486499773135,1.01376931219515,1.28482726513177,5.47673941043627,21.3664653252838,27.02140047634,31.4976436500339,4.4795654920116,21.5628846547457,10.2347389695219,31.1905721064878,21.8460969442602,0,9.16907007804022,30.9403255366465,32.168317276676,33.8554226734101,40.5652098243955,1.0165335962074,3.55717918444456,3.1496490104849,0.988866362566974,1.4209602298922,20.9720077362883,59.553837324841,8.19147937236973,8.77538599155989,9.46462326081219,30.2790043468032,28.7129103237098,10.4117179332711,5.65488279007595,6.43453150627015,16.5173821499083,17.2377906415003,15.8214729253931,41.2804080595507,30.1909223887952,31.2548022334056,14.2383329490704,51.2113975128829,35.1435969886663,30.6413728892614,21.7828671622628,32.6199030194276,1.28734528666413,0.529000920747499,50.7262855227936,45.6024654800135,51.677821361789,54.5100223554195,63.0283124924239,49.2829575807069,53.6497684903292,0,0,0,88.0271373604253,0,0,0,147.646889969648,160.376794845737,161.767822404731,79.1294286453086,15.2773351351831,18.8521516612327,9.02123699183906,16.1366703505435,19.3717017695089,23.8141772073144,22.8122091843267,8.16832843642891,73.416905417109,10.8449517689934,10.6153266233985,4.20593809863264,5.07935492458905,5.81850303762267,160.296914647585,13.7606974595427,21.5730108017859,151.741490793903,41.6956633280603,47.9922184794726,37.7398574407002,14.6794826616726,15.5550204958333,19.8533876338326,16.6871347384585,11.7629110371952,15.1685272528479,15.8996437806402,27.8021463311363,46.2793930669546,265.611619113792,109.008881349194,17.8265006858904,21.8406999211799,24.3083875237221,27.4282768461001,30.2762421223409,32.5408849523518,32.2333932485467,46.5666067330228,18.5388473922244,17.3977593754394,25.3369618796086,21.0427903130472,16.1267404550847,12.8853301613202,15.2278780941878,29.457071489137,32.3018066164088,35.5140111818307,42.0561979105477,9.32065976409758,23.9216581180718,29.1700539566844,25.8051761787879,23.2181793461937,23.7571353846563,23.4859284197912,24.4128795273653,27.2063247715505,23.2029388378007,19.3717607613332,11.9981838127866,13.4503988431306,14.2707574939183,15.4337381574428,20.3981250107203,17.2879748797198,140.758401551098,97.5822590988478,22.6085545567348,25.0815605609274,37.1138288607629,51.6309823035757,42.4742063743702,69.6225791571967,110.565271339871,100.136964472199,88.7213287064951,83.3627617852422,84.419449722579,97.0724961346559,118.227513281458,122.67102432469,27.5018456381968,20.5647322697512,28.1769339182701,27.4929292591174,27.5412531778029,34.1561442865851,38.5110511086727,41.3308414342886,41.7616616058057,62.3155677805093,29.6452627087149,9.67701613153345,11.2038627214526,9.44420872016386,10.1430060694251,12.0588579876208,23.4255783638906,21.8649064462616,24.3202840162553,22.2394744682346,17.2521847832825,21.5841749647732,26.2111645416231,22.7320990152401,23.6804585848924,31.8412724099822,62.8160846566456,19.8965982359009,17.7631824321808,29.0264096675572,31.2138030223708,38.0239204392922,42.3717680777104,44.6856053594359,33.5762856946187,28.3474802750432,29.4991322016351,41.7851452525132,39.3721758654242,61.1865517799794,1.50791283939272,9.79030230873677,87.0422763243694,68.9841865761831,10.9174401191699,8.55645312123083,0,3.02965112645248,55.2139383978449,53.0996692243428,51.2707686604061,44.9261340150798,28.9638276307112,24.0615051170508,40.4810701674894,39.4545408180271,37.9476266828663,5.46246237917072,33.7817402795679,44.3383353131466,33.8804875455438,65.6581089430691,229.649089328136,49.2844691394612,78.3018012538705,99.7720871908701,139.087191546844,114.673310183085,74.6857767256159,127.963872776082,127.62606146173,165.287224400432,267.763265780497,255.776147255503,188.603541587599,26.4689808226026,48.6388651023157,47.3684847419819,62.4237622420803,60.1102915318978,66.1487062820526,120.872584798496,15.2536610241412,37.4942765428962,222.513153637457,24.5680516882805,21.3133043238595,16.4654285053865,29.0074795927622,27.0832484579351,95.8971952512209,6.11903496634682,15.5492501526046,18.7812049846532,7.9633646768976,9.04168593622517,7.38148829693536,7.77845788902177,89.4086541767679,87.6096091546099,83.3345842040676,159.429993208524,19.9291675956115,33.3443926088032,46.2262858717309,51.2266325235448,53.9355532453059,45.5841490780694,50.1706476252789,107.84344809742,174.461754050753,146.636077888514,233.932569553939,37.9772026951706,40.3718716715318,50.5573089694524,65.0965510327765,60.3173368002078,67.0109832667255,72.5238423580802,79.063945696986,192.300960177501,168.209523654593,167.169882812306,57.3712359271165,72.1030919297087,93.153230075079,130.510461141594,151.991236407668,125.243658399808,134.840538310389,128.530290783992,143.57362373802,162.935115181134,140.534264026723,160.769987380991,189.92496604505,24.2601510468276,51.500741182783,19.5576207408657,47.007692581942,80.3668711173912,73.3838479014122,79.487804931993,45.446096364762,191.098971637473,9.60078132449013,9.20650473014354,10.3121192419091,16.8416118696814,16.4419804744954,21.1510291269116,19.5756525067224,23.8670237708837,19.0319811773366,23.2992140288319,2.69847103718859,14.3648954424371,11.9513524027894,11.6691224192781,5.24032906569956,7.53758384645058,19.5577120465421,17.9250499797838,18.9342333659171,18.699593670521,16.4761544928656,17.1649970661329,17.6982449118078,17.2867911493147,13.669641611436,14.7651044297753,18.0779548473975,16.2043745189512,14.4230065281157,14.4254941731709,18.8578088811978,19.3448628713678,15.2599161566285,16.1334522461885,15.7162665293602,14.9767855968267,14.0854539112035,19.7302283578382,14.5310401815072,17.9565526930476,15.659822392391,17.3367888980992,16.3692417267876,14.5640630714808,18.3261280432084,22.4829520144151,21.755639585423,23.2060738372162,9.75570493551101,13.2354851471709,6.95603506861264|short_description=p3@Spint2}} | ||
|EntrezGene=20733 | |||
|HGNC= | |||
|MCL_coexpression_id=849 | |||
|UniProt=Q9WU03,Q9D8Q8 | |||
|association_with_transcript=288bp_to_ENSMUST00000098604,ENSMUST00000108235,ENSMUST00000108236,ENSMUST00000166639,ENSMUST00000171454,NM_001082548,NM_011464,uc009gbk.1,uc009gbl.1,uc009gbm.1_5end | |||
|description=CAGE_peak_3_at_Spint2_5end | |||
|id=chr7:30066635..30066707,- | |||
|ontology_enrichment_celltype=CL:0000066!5.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.32e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.85e-19!128;UBERON:0001555!3.85e-19!128;UBERON:0007026!3.85e-19!128;UBERON:0004119!8.53e-19!130;UBERON:0000925!8.53e-19!130;UBERON:0006595!8.53e-19!130;UBERON:0004921!5.88e-18!126;UBERON:0004185!5.88e-18!126;UBERON:0000160!8.08e-18!43;UBERON:0005409!2.62e-14!59;UBERON:0000344!4.80e-10!15;UBERON:0001242!7.84e-09!13;UBERON:0000060!7.84e-09!13;UBERON:0001262!7.84e-09!13;UBERON:0004786!7.84e-09!13;UBERON:0002108!1.08e-08!16;UBERON:0000464!4.13e-08!57;UBERON:0000480!2.03e-07!308;UBERON:0000467!2.03e-07!308;UBERON:0002050!3.00e-07!317;UBERON:0005423!3.00e-07!317;UBERON:0000077!6.07e-07!97;UBERON:0001045!7.32e-07!13;UBERON:0000923!8.06e-07!314;UBERON:0005291!8.06e-07!314;UBERON:0006598!8.06e-07!314;UBERON:0002532!8.06e-07!314 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.30e-14,116;UBERON:0001555,8.30e-14,116;UBERON:0007026,8.30e-14,116;UBERON:0004119,1.65e-13,118;UBERON:0000925,1.65e-13,118;UBERON:0006595,1.65e-13,118;UBERON:0004921,8.55e-13,114;UBERON:0000160,2.04e-12,31;UBERON:0000344,4.80e-10,15;UBERON:0005409,2.47e-09,47;UBERON:0001242,7.84e-09,13;UBERON:0001262,7.84e-09,13;UBERON:0004786,7.84e-09,13 | |||
|phase1_expression=53.649863780106,175.185654634959,219.764632625146,136.41135929938,146.76244887428,162.339255938797,164.696911619846,48.6794929374743,38.5761098695567,53.1326474750925,49.4819928171709,58.2336760665956,26.0225109495433,36.4543078087219,18.9872564234928,10.3262386368811,9.79386629379405,13.8803352757625,14.2599010949968,14.8536378129311,94.1429221972342,62.1561354517542,70.7851428566515,175.031710535987,239.96210799626,256.107455995299,245.965099806832,202.973901190107,295.106370415749,250.517948981371,341.464986409169,1.27006134691926,3.69038872550742,0,181.109965584049,201.310155529134,193.960888449251,9.62622750694888,9.37602413428561,7.32933241563318,11.1763982725893,10.9287277593351,12.1377588257788,1.38486499773135,1.01376931219515,1.28482726513177,5.47673941043627,21.3664653252838,27.02140047634,31.4976436500339,4.4795654920116,21.5628846547457,10.2347389695219,31.1905721064878,21.8460969442602,0,9.16907007804022,30.9403255366465,32.168317276676,33.8554226734101,40.5652098243955,1.0165335962074,3.55717918444456,3.1496490104849,0.988866362566974,1.4209602298922,20.9720077362883,59.553837324841,8.19147937236973,8.77538599155989,9.46462326081219,30.2790043468032,28.7129103237098,10.4117179332711,5.65488279007595,6.43453150627015,16.5173821499083,17.2377906415003,15.8214729253931,41.2804080595507,30.1909223887952,31.2548022334056,14.2383329490704,51.2113975128829,35.1435969886663,30.6413728892614,21.7828671622628,32.6199030194276,1.28734528666413,0.529000920747499,50.7262855227936,45.6024654800135,51.677821361789,54.5100223554195,63.0283124924239,49.2829575807069,53.6497684903292,0,0,0,88.0271373604253,0,0,0,147.646889969648,160.376794845737,161.767822404731,79.1294286453086,15.2773351351831,18.8521516612327,9.02123699183906,16.1366703505435,19.3717017695089,23.8141772073144,22.8122091843267,8.16832843642891,73.416905417109,10.8449517689934,10.6153266233985,4.20593809863264,5.07935492458905,5.81850303762267,160.296914647585,13.7606974595427,21.5730108017859,151.741490793903,41.6956633280603,47.9922184794726,37.7398574407002,14.6794826616726,15.5550204958333,19.8533876338326,16.6871347384585,11.7629110371952,15.1685272528479,15.8996437806402,27.8021463311363,46.2793930669546,265.611619113792,109.008881349194,17.8265006858904,21.8406999211799,24.3083875237221,27.4282768461001,30.2762421223409,32.5408849523518,32.2333932485467,46.5666067330228,18.5388473922244,17.3977593754394,25.3369618796086,21.0427903130472,16.1267404550847,12.8853301613202,15.2278780941878,29.457071489137,32.3018066164088,35.5140111818307,42.0561979105477,9.32065976409758,23.9216581180718,29.1700539566844,25.8051761787879,23.2181793461937,23.7571353846563,23.4859284197912,24.4128795273653,27.2063247715505,23.2029388378007,19.3717607613332,11.9981838127866,13.4503988431306,14.2707574939183,15.4337381574428,20.3981250107203,17.2879748797198,140.758401551098,97.5822590988478,22.6085545567348,25.0815605609274,37.1138288607629,51.6309823035757,42.4742063743702,69.6225791571967,110.565271339871,100.136964472199,88.7213287064951,83.3627617852422,84.419449722579,97.0724961346559,118.227513281458,122.67102432469,27.5018456381968,20.5647322697512,28.1769339182701,27.4929292591174,27.5412531778029,34.1561442865851,38.5110511086727,41.3308414342886,41.7616616058057,62.3155677805093,29.6452627087149,9.67701613153345,11.2038627214526,9.44420872016386,10.1430060694251,12.0588579876208,23.4255783638906,21.8649064462616,24.3202840162553,22.2394744682346,17.2521847832825,21.5841749647732,26.2111645416231,22.7320990152401,23.6804585848924,31.8412724099822,62.8160846566456,19.8965982359009,17.7631824321808,29.0264096675572,31.2138030223708,38.0239204392922,42.3717680777104,44.6856053594359,33.5762856946187,28.3474802750432,29.4991322016351,41.7851452525132,39.3721758654242,61.1865517799794,1.50791283939272,9.79030230873677,87.0422763243694,68.9841865761831,10.9174401191699,8.55645312123083,0,3.02965112645248,55.2139383978449,53.0996692243428,51.2707686604061,44.9261340150798,28.9638276307112,24.0615051170508,40.4810701674894,39.4545408180271,37.9476266828663,5.46246237917072,33.7817402795679,44.3383353131466,33.8804875455438,65.6581089430691,229.649089328136,49.2844691394612,78.3018012538705,99.7720871908701,139.087191546844,114.673310183085,74.6857767256159,127.963872776082,127.62606146173,165.287224400432,267.763265780497,255.776147255503,188.603541587599,26.4689808226026,48.6388651023157,47.3684847419819,62.4237622420803,60.1102915318978,66.1487062820526,120.872584798496,15.2536610241412,37.4942765428962,222.513153637457,24.5680516882805,21.3133043238595,16.4654285053865,29.0074795927622,27.0832484579351,95.8971952512209,6.11903496634682,15.5492501526046,18.7812049846532,7.9633646768976,9.04168593622517,7.38148829693536,7.77845788902177,89.4086541767679,87.6096091546099,83.3345842040676,159.429993208524,19.9291675956115,33.3443926088032,46.2262858717309,51.2266325235448,53.9355532453059,45.5841490780694,50.1706476252789,107.84344809742,174.461754050753,146.636077888514,233.932569553939,37.9772026951706,40.3718716715318,50.5573089694524,65.0965510327765,60.3173368002078,67.0109832667255,72.5238423580802,79.063945696986,192.300960177501,168.209523654593,167.169882812306,57.3712359271165,72.1030919297087,93.153230075079,130.510461141594,151.991236407668,125.243658399808,134.840538310389,128.530290783992,143.57362373802,162.935115181134,140.534264026723,160.769987380991,189.92496604505,24.2601510468276,51.500741182783,19.5576207408657,47.007692581942,80.3668711173912,73.3838479014122,79.487804931993,45.446096364762,191.098971637473,9.60078132449013,9.20650473014354,10.3121192419091,16.8416118696814,16.4419804744954,21.1510291269116,19.5756525067224,23.8670237708837,19.0319811773366,23.2992140288319,2.69847103718859,14.3648954424371,11.9513524027894,11.6691224192781,5.24032906569956,7.53758384645058,19.5577120465421,17.9250499797838,18.9342333659171,18.699593670521,16.4761544928656,17.1649970661329,17.6982449118078,17.2867911493147,13.669641611436,14.7651044297753,18.0779548473975,16.2043745189512,14.4230065281157,14.4254941731709,18.8578088811978,19.3448628713678,15.2599161566285,16.1334522461885,15.7162665293602,14.9767855968267,14.0854539112035,19.7302283578382,14.5310401815072,17.9565526930476,15.659822392391,17.3367888980992,16.3692417267876,14.5640630714808,18.3261280432084,22.4829520144151,21.755639585423,23.2060738372162,9.75570493551101,13.2354851471709,6.95603506861264 | |||
|short_description=p3@Spint2 | |||
}} | |||
Revision as of 13:08, 14 September 2013
| Short description: | p3@Spint2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Spint2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:849 |
| Association with transcript: | 288bp_to_ENSMUST00000098604, ENSMUST00000108235, ENSMUST00000108236, ENSMUST00000166639, ENSMUST00000171454, NM_001082548, NM_011464, uc009gbk.1, uc009gbl.1, uc009gbm.1_5end |
| EntrezGene: | Spint2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.32e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| digestive system | 8.30e-14 | 116 |
| digestive tract | 8.30e-14 | 116 |
| primitive gut | 8.30e-14 | 116 |
| endoderm-derived structure | 1.65e-13 | 118 |
| endoderm | 1.65e-13 | 118 |
| presumptive endoderm | 1.65e-13 | 118 |
| subdivision of digestive tract | 8.55e-13 | 114 |
| intestine | 2.04e-12 | 31 |
| mucosa | 4.80e-10 | 15 |
| gastrointestinal system | 2.47e-09 | 47 |
| intestinal mucosa | 7.84e-09 | 13 |
| wall of intestine | 7.84e-09 | 13 |
| gastrointestinal system mucosa | 7.84e-09 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
