FFCP PHASE1:Mm9::chr7:25285747..25285757,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25285747..25285757,+|id=chr7:25285747..25285757,+|ontology_enrichment_celltype=CL:0002319!1.11e-16!43;CL:0000221!4.70e-16!44;CL:0000133!4.70e-16!44;CL:0000540!1.21e-14!33;CL:0000047!1.21e-14!33;CL:0000031!1.21e-14!33;CL:0000404!1.21e-14!33;CL:0000055!7.36e-13!50;CL:0000393!4.33e-11!39;CL:0000211!4.33e-11!39;CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0002321!3.39e-07!70;CL:0000220!3.39e-07!70|ontology_enrichment_celltype_v019_2=CL:0000107,1.53e-12,9;CL:0000120,4.52e-10,3;CL:0000540,1.12e-09,33;CL:0000047,1.12e-09,33;CL:0000031,1.12e-09,33;CL:0000404,1.12e-09,33;CL:0002319,1.47e-09,43;CL:0000221,2.52e-09,44;CL:0000133,2.52e-09,44;CL:0000393,4.17e-08,39;CL:0000211,4.17e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.57e-23!73;UBERON:0005743!7.57e-23!73;UBERON:0000073!7.98e-23!75;UBERON:0001016!7.98e-23!75;UBERON:0004121!2.06e-16!102;UBERON:0000924!2.06e-16!102;UBERON:0006601!2.06e-16!102;UBERON:0001049!2.93e-13!52;UBERON:0005068!2.93e-13!52;UBERON:0006241!2.93e-13!52;UBERON:0007135!2.93e-13!52;UBERON:0002616!1.18e-12!49;UBERON:0000955!3.37e-12!50;UBERON:0006238!3.37e-12!50;UBERON:0002346!1.06e-09!71;UBERON:0003075!1.06e-09!71;UBERON:0007284!1.06e-09!71;UBERON:0003080!3.77e-09!40;UBERON:0002780!9.40e-09!39;UBERON:0001890!9.40e-09!39;UBERON:0006240!9.40e-09!39;UBERON:0002020!3.71e-08!34;UBERON:0000033!1.00e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.53e-12,9;UBERON:0001017,2.57e-10,73;UBERON:0000010,2.62e-10,11;UBERON:0000013,2.97e-10,3;UBERON:0000011,5.01e-10,3;UBERON:0001016,5.20e-10,75;UBERON:0001851,1.05e-07,1;UBERON:0005889,1.05e-07,1;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.898800331555214,1.92109152660777,0.311068836925433,0.945041568321835,0.630974884054146,0,0.220868540951614,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,8.3778682725382,0,0,0,0,0.149790639404823,0,0.376963056338593,0,1.02286182932132,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0.955875191810208,1.11399337041197,1.13230612315533,1.61924280669958,1.75353514746787,0.395287777946524,0,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p@chr7:25285747..25285757,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25285747..25285757,+ | |||
|id=chr7:25285747..25285757,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.11e-16!43;CL:0000221!4.70e-16!44;CL:0000133!4.70e-16!44;CL:0000540!1.21e-14!33;CL:0000047!1.21e-14!33;CL:0000031!1.21e-14!33;CL:0000404!1.21e-14!33;CL:0000055!7.36e-13!50;CL:0000393!4.33e-11!39;CL:0000211!4.33e-11!39;CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0002321!3.39e-07!70;CL:0000220!3.39e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.53e-12,9;CL:0000120,4.52e-10,3;CL:0000540,1.12e-09,33;CL:0000047,1.12e-09,33;CL:0000031,1.12e-09,33;CL:0000404,1.12e-09,33;CL:0002319,1.47e-09,43;CL:0000221,2.52e-09,44;CL:0000133,2.52e-09,44;CL:0000393,4.17e-08,39;CL:0000211,4.17e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.57e-23!73;UBERON:0005743!7.57e-23!73;UBERON:0000073!7.98e-23!75;UBERON:0001016!7.98e-23!75;UBERON:0004121!2.06e-16!102;UBERON:0000924!2.06e-16!102;UBERON:0006601!2.06e-16!102;UBERON:0001049!2.93e-13!52;UBERON:0005068!2.93e-13!52;UBERON:0006241!2.93e-13!52;UBERON:0007135!2.93e-13!52;UBERON:0002616!1.18e-12!49;UBERON:0000955!3.37e-12!50;UBERON:0006238!3.37e-12!50;UBERON:0002346!1.06e-09!71;UBERON:0003075!1.06e-09!71;UBERON:0007284!1.06e-09!71;UBERON:0003080!3.77e-09!40;UBERON:0002780!9.40e-09!39;UBERON:0001890!9.40e-09!39;UBERON:0006240!9.40e-09!39;UBERON:0002020!3.71e-08!34;UBERON:0000033!1.00e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.53e-12,9;UBERON:0001017,2.57e-10,73;UBERON:0000010,2.62e-10,11;UBERON:0000013,2.97e-10,3;UBERON:0000011,5.01e-10,3;UBERON:0001016,5.20e-10,75;UBERON:0001851,1.05e-07,1;UBERON:0005889,1.05e-07,1;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.898800331555214,1.92109152660777,0.311068836925433,0.945041568321835,0.630974884054146,0,0.220868540951614,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,8.3778682725382,0,0,0,0,0.149790639404823,0,0.376963056338593,0,1.02286182932132,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0.955875191810208,1.11399337041197,1.13230612315533,1.61924280669958,1.75353514746787,0.395287777946524,0,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:25285747..25285757,+ | |||
}} |
Revision as of 12:47, 14 September 2013
Short description: | p@chr7:25285747..25285757, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25285747..25285757, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.53e-12 | 9 |
granule cell | 4.52e-10 | 3 |
neuron | 1.12e-09 | 33 |
neuronal stem cell | 1.12e-09 | 33 |
neuroblast | 1.12e-09 | 33 |
electrically signaling cell | 1.12e-09 | 33 |
neural cell | 1.47e-09 | 43 |
ectodermal cell | 2.52e-09 | 44 |
neurectodermal cell | 2.52e-09 | 44 |
electrically responsive cell | 4.17e-08 | 39 |
electrically active cell | 4.17e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.53e-12 | 9 |
central nervous system | 2.57e-10 | 73 |
peripheral nervous system | 2.62e-10 | 11 |
sympathetic nervous system | 2.97e-10 | 3 |
parasympathetic nervous system | 5.01e-10 | 3 |
nervous system | 5.20e-10 | 75 |
cortex | 1.05e-07 | 1 |
zygote cortex | 1.05e-07 | 1 |
ectoderm-derived structure | 1.20e-07 | 95 |
ectoderm | 1.20e-07 | 95 |
presumptive ectoderm | 1.20e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.