FFCP PHASE1:Mm9::chr7:19152723..19152744,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=545925|HGNC=|MCL_coexpression_id=58|UniProt=Q497W2|association_with_transcript=-69bp_to_ENSMUST00000094794,NM_001037168,uc009fjn.1_5end|description=CAGE_peak_4_at_Psg27_5end|id=chr7:19152723..19152744,-|ontology_enrichment_celltype=CL:0000473!2.21e-20!3;CL:0000627!2.21e-20!3;CL:0000682!2.21e-20!3;CL:0000239!2.29e-17!6;CL:0000677!2.29e-17!6;CL:0000212!2.29e-17!6;CL:0000584!2.29e-17!6;CL:0000075!6.26e-15!7;CL:0000066!3.49e-12!25;CL:0002563!1.13e-11!9;CL:0002251!1.13e-11!9;CL:0002076!4.39e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,3.08e-25,3;CL:0000239,1.34e-21,6;CL:0000677,1.34e-21,6;CL:0000584,1.34e-21,6;CL:0000075,1.41e-18,7;CL:0000066,1.64e-15,25;CL:0002563,1.55e-14,9;CL:0002251,1.55e-14,9;CL:0000473,3.36e-11,7;CL:0002076,7.57e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!4.21e-25!24;UBERON:0000344!2.53e-20!15;UBERON:0005631!8.34e-19!3;UBERON:0000478!8.34e-19!3;UBERON:0000158!8.34e-19!3;UBERON:0001962!9.45e-14!2;UBERON:0001961!9.45e-14!2;UBERON:0001744!9.45e-14!2;UBERON:0001987!4.00e-13!2;UBERON:0003124!4.00e-13!2;UBERON:0004340!4.00e-13!2;UBERON:0001242!2.89e-12!13;UBERON:0000060!2.89e-12!13;UBERON:0001262!2.89e-12!13;UBERON:0004786!2.89e-12!13;UBERON:0003350!1.13e-11!9;UBERON:0004808!1.13e-11!9;UBERON:0001277!1.13e-11!9;UBERON:0000485!1.36e-09!11;UBERON:0002465!1.79e-09!3;UBERON:0003199!9.86e-08!1;UBERON:0000305!2.37e-07!1;UBERON:0005795!5.23e-07!4;UBERON:0000995!5.23e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.31e-25,15;UBERON:0004923,1.25e-20,24;UBERON:0001962,6.88e-17,2;UBERON:0001961,6.88e-17,2;UBERON:0001744,6.88e-17,2;UBERON:0001242,2.22e-15,13;UBERON:0001262,2.22e-15,13;UBERON:0004786,2.22e-15,13;UBERON:0003350,1.55e-14,9;UBERON:0004808,1.55e-14,9;UBERON:0001277,1.55e-14,9;UBERON:0000485,5.89e-12,11;UBERON:0002465,1.37e-11,3;UBERON:0003199,2.52e-09,1|phase1_expression=0,11.1672130444596,8.18998630901165,0,0,2.51818907867835,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,9.18771142584032,6.46142994238612,9.69620547086501,0,0,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Psg27}} | ||
|EntrezGene=545925 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=Q497W2 | |||
|association_with_transcript=-69bp_to_ENSMUST00000094794,NM_001037168,uc009fjn.1_5end | |||
|description=CAGE_peak_4_at_Psg27_5end | |||
|id=chr7:19152723..19152744,- | |||
|ontology_enrichment_celltype=CL:0000473!2.21e-20!3;CL:0000627!2.21e-20!3;CL:0000682!2.21e-20!3;CL:0000239!2.29e-17!6;CL:0000677!2.29e-17!6;CL:0000212!2.29e-17!6;CL:0000584!2.29e-17!6;CL:0000075!6.26e-15!7;CL:0000066!3.49e-12!25;CL:0002563!1.13e-11!9;CL:0002251!1.13e-11!9;CL:0002076!4.39e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.08e-25,3;CL:0000239,1.34e-21,6;CL:0000677,1.34e-21,6;CL:0000584,1.34e-21,6;CL:0000075,1.41e-18,7;CL:0000066,1.64e-15,25;CL:0002563,1.55e-14,9;CL:0002251,1.55e-14,9;CL:0000473,3.36e-11,7;CL:0002076,7.57e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.21e-25!24;UBERON:0000344!2.53e-20!15;UBERON:0005631!8.34e-19!3;UBERON:0000478!8.34e-19!3;UBERON:0000158!8.34e-19!3;UBERON:0001962!9.45e-14!2;UBERON:0001961!9.45e-14!2;UBERON:0001744!9.45e-14!2;UBERON:0001987!4.00e-13!2;UBERON:0003124!4.00e-13!2;UBERON:0004340!4.00e-13!2;UBERON:0001242!2.89e-12!13;UBERON:0000060!2.89e-12!13;UBERON:0001262!2.89e-12!13;UBERON:0004786!2.89e-12!13;UBERON:0003350!1.13e-11!9;UBERON:0004808!1.13e-11!9;UBERON:0001277!1.13e-11!9;UBERON:0000485!1.36e-09!11;UBERON:0002465!1.79e-09!3;UBERON:0003199!9.86e-08!1;UBERON:0000305!2.37e-07!1;UBERON:0005795!5.23e-07!4;UBERON:0000995!5.23e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.31e-25,15;UBERON:0004923,1.25e-20,24;UBERON:0001962,6.88e-17,2;UBERON:0001961,6.88e-17,2;UBERON:0001744,6.88e-17,2;UBERON:0001242,2.22e-15,13;UBERON:0001262,2.22e-15,13;UBERON:0004786,2.22e-15,13;UBERON:0003350,1.55e-14,9;UBERON:0004808,1.55e-14,9;UBERON:0001277,1.55e-14,9;UBERON:0000485,5.89e-12,11;UBERON:0002465,1.37e-11,3;UBERON:0003199,2.52e-09,1 | |||
|phase1_expression=0,11.1672130444596,8.18998630901165,0,0,2.51818907867835,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,9.18771142584032,6.46142994238612,9.69620547086501,0,0,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Psg27 | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p4@Psg27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Psg27_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -69bp_to_ENSMUST00000094794, NM_001037168, uc009fjn.1_5end |
EntrezGene: | Psg27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.08e-25 | 3 |
brush border epithelial cell | 1.34e-21 | 6 |
gut absorptive cell | 1.34e-21 | 6 |
enterocyte | 1.34e-21 | 6 |
columnar/cuboidal epithelial cell | 1.41e-18 | 7 |
epithelial cell | 1.64e-15 | 25 |
intestinal epithelial cell | 1.55e-14 | 9 |
epithelial cell of alimentary canal | 1.55e-14 | 9 |
defensive cell | 3.36e-11 | 7 |
endo-epithelial cell | 7.57e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.31e-25 | 15 |
organ component layer | 1.25e-20 | 24 |
gut-associated lymphoid tissue | 6.88e-17 | 2 |
mucosa-associated lymphoid tissue | 6.88e-17 | 2 |
lymphoid tissue | 6.88e-17 | 2 |
intestinal mucosa | 2.22e-15 | 13 |
wall of intestine | 2.22e-15 | 13 |
gastrointestinal system mucosa | 2.22e-15 | 13 |
epithelium of mucosa | 1.55e-14 | 9 |
gastrointestinal system epithelium | 1.55e-14 | 9 |
intestinal epithelium | 1.55e-14 | 9 |
simple columnar epithelium | 5.89e-12 | 11 |
lymphoid system | 1.37e-11 | 3 |
egg chamber | 2.52e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.