FFCP PHASE1:Hg19::chrX:48644984..48645005,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2623|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4170|TSSclassifier=S|UniProt=P15976|association_with_transcript=2bp_to_NM_002049,uc004dkq.3_5end|coexpression_cluster_id=C33|description=CAGE_peak_1_at_GATA1_5end|id=chrX:48644984..48645005,+|ontology_enrichment_celltype=CL:0000094!2.82e-13!8;CL:0000763!6.86e-13!112;CL:0000049!6.86e-13!112;CL:0000037!1.66e-10!172;CL:0000566!1.66e-10!172;CL:0002274!4.92e-10!5;CL:0000457!4.92e-10!5;CL:0002191!4.92e-10!5;CL:0000097!4.92e-10!5;CL:0000831!4.92e-10!5;CL:0002028!4.92e-10!5;CL:0000988!3.09e-09!182;CL:0000081!3.63e-09!11;CL:0002032!8.48e-09!165;CL:0000837!8.48e-09!165|ontology_enrichment_celltype_v019=CL:0000097;1.10e-18;5!CL:0000094;6.72e-15;8!CL:0000775;5.28e-11;3!CL:0000081;1.16e-10;11!CL:0000163;3.20e-10;9!CL:0000764;5.66e-09;2!CL:0000558;5.66e-09;2!CL:0000763;1.10e-07;100!CL:0000771;1.24e-07;2|ontology_enrichment_celltype_v019_2=CL:0000763,4.46e-19,108;CL:0000049,4.46e-19,108;CL:0000097,1.11e-18,5;CL:0002028,1.11e-18,5;CL:0000094,6.72e-15,8;CL:0000037,8.93e-14,168;CL:0000988,1.10e-12,177;CL:0002032,1.60e-12,161;CL:0000837,1.60e-12,161;CL:0000775,5.28e-11,3;CL:0000081,1.16e-10,11;CL:0000163,3.20e-10,9;CL:0000764,5.67e-09,2;CL:0000765,5.67e-09,2;CL:0000050,5.67e-09,2;CL:0000038,5.67e-09,2;CL:0000558,5.67e-09,2;CL:0000547,5.67e-09,2;CL:0000549,5.67e-09,2;CL:0000550,5.67e-09,2;CL:0000552,5.67e-09,2;CL:0000771,1.26e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!4.97e-15!31;DOID:1240!4.02e-12!39;DOID:1036!8.82e-12!8;DOID:2531!5.41e-08!51;DOID:0060083!5.41e-08!51|ontology_enrichment_disease_v019=DOID:1036;1.03e-22;8!DOID:8692;1.94e-22;31!DOID:1240;3.10e-14;39!DOID:2531;6.55e-09;51!DOID:0060083;6.55e-09;51|ontology_enrichment_disease_v019_2=DOID:8692,3.40e-23,31;DOID:1036,1.05e-22,8;DOID:1240,1.14e-17,39;DOID:2531,1.19e-12,51;DOID:0060083,1.19e-12,51|ontology_enrichment_uberon=UBERON:0000178!2.72e-15!15;UBERON:0000179!2.72e-15!15;UBERON:0000463!2.72e-15!15;UBERON:0007023!1.28e-13!115|ontology_enrichment_uberon_v019=UBERON:0000178;7.69e-22;15!UBERON:0000179;7.69e-22;15!UBERON:0000463;7.69e-22;15!UBERON:0002390;1.59e-12;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.82e-22,15;UBERON:0000179,8.82e-22,15;UBERON:0000463,8.82e-22,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,0.767658796194425,0.77408061658038,0,0,0,0,0,8.80801318004542,0,0,0,0.671746422719773,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,0,0,0,30.3994055731759,16.2547483264645,71.1137028892708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.97505365928,83.8221091805912,39.8069981838282,70.4746572208941,53.2743069059323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,6.74106321552464,17.9496875522415,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,366.602513752003,401.303417323222,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,35.5213326462519,44.3489580142578,34.7484784176239,16.6762242820452,8.22724546172388,25.290459136516,32.4018862342869,30.9318818754765,0,0,0,0,0,0,0,0.798317485731266,0.957526850661834,1.69338866179106,0,0.280797178113459,0,0,2.50634477090067,1.35433422241283,0,0,0,0,0,0,0,0,0,93.5464232002614,183.639405685193,7.32758329595204,152.265965494877,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,9.10485487091144,184.328755227273,214.541473246939,202.532597950225,229.747752569929,188.235702862392,165.929788455515,0,0,0,0,0,0,3.05515072466813,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,1.88113722962834,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,123.877613810752,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4170 | |||
|TSSclassifier=S | |||
|UniProt=P15976 | |||
|association_with_transcript=2bp_to_NM_002049,uc004dkq.3_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_GATA1_5end | |||
|id=chrX:48644984..48645005,+ | |||
|ontology_enrichment_celltype=CL:0000094!2.82e-13!8;CL:0000763!6.86e-13!112;CL:0000049!6.86e-13!112;CL:0000037!1.66e-10!172;CL:0000566!1.66e-10!172;CL:0002274!4.92e-10!5;CL:0000457!4.92e-10!5;CL:0002191!4.92e-10!5;CL:0000097!4.92e-10!5;CL:0000831!4.92e-10!5;CL:0002028!4.92e-10!5;CL:0000988!3.09e-09!182;CL:0000081!3.63e-09!11;CL:0002032!8.48e-09!165;CL:0000837!8.48e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.10e-18;5!CL:0000094;6.72e-15;8!CL:0000775;5.28e-11;3!CL:0000081;1.16e-10;11!CL:0000163;3.20e-10;9!CL:0000764;5.66e-09;2!CL:0000558;5.66e-09;2!CL:0000763;1.10e-07;100!CL:0000771;1.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.46e-19,108;CL:0000049,4.46e-19,108;CL:0000097,1.11e-18,5;CL:0002028,1.11e-18,5;CL:0000094,6.72e-15,8;CL:0000037,8.93e-14,168;CL:0000988,1.10e-12,177;CL:0002032,1.60e-12,161;CL:0000837,1.60e-12,161;CL:0000775,5.28e-11,3;CL:0000081,1.16e-10,11;CL:0000163,3.20e-10,9;CL:0000764,5.67e-09,2;CL:0000765,5.67e-09,2;CL:0000050,5.67e-09,2;CL:0000038,5.67e-09,2;CL:0000558,5.67e-09,2;CL:0000547,5.67e-09,2;CL:0000549,5.67e-09,2;CL:0000550,5.67e-09,2;CL:0000552,5.67e-09,2;CL:0000771,1.26e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.97e-15!31;DOID:1240!4.02e-12!39;DOID:1036!8.82e-12!8;DOID:2531!5.41e-08!51;DOID:0060083!5.41e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.03e-22;8!DOID:8692;1.94e-22;31!DOID:1240;3.10e-14;39!DOID:2531;6.55e-09;51!DOID:0060083;6.55e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.40e-23,31;DOID:1036,1.05e-22,8;DOID:1240,1.14e-17,39;DOID:2531,1.19e-12,51;DOID:0060083,1.19e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.72e-15!15;UBERON:0000179!2.72e-15!15;UBERON:0000463!2.72e-15!15;UBERON:0007023!1.28e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.69e-22;15!UBERON:0000179;7.69e-22;15!UBERON:0000463;7.69e-22;15!UBERON:0002390;1.59e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.82e-22,15;UBERON:0000179,8.82e-22,15;UBERON:0000463,8.82e-22,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,0.767658796194425,0.77408061658038,0,0,0,0,0,8.80801318004542,0,0,0,0.671746422719773,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,0,0,0,30.3994055731759,16.2547483264645,71.1137028892708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.97505365928,83.8221091805912,39.8069981838282,70.4746572208941,53.2743069059323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,6.74106321552464,17.9496875522415,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,366.602513752003,401.303417323222,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,35.5213326462519,44.3489580142578,34.7484784176239,16.6762242820452,8.22724546172388,25.290459136516,32.4018862342869,30.9318818754765,0,0,0,0,0,0,0,0.798317485731266,0.957526850661834,1.69338866179106,0,0.280797178113459,0,0,2.50634477090067,1.35433422241283,0,0,0,0,0,0,0,0,0,93.5464232002614,183.639405685193,7.32758329595204,152.265965494877,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,9.10485487091144,184.328755227273,214.541473246939,202.532597950225,229.747752569929,188.235702862392,165.929788455515,0,0,0,0,0,0,3.05515072466813,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,1.88113722962834,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,123.877613810752,0,0,0.146552233678082,88.7796155711883,0,0,0,0,1.38823636338003,8.17462386518263,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.313972371402056,0.157115589916002,0,0,1.72742072974897,0,0.357382720883282,0,0,0,0,1.65772931330429,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0.485710993059139,0,0,0.475680363110274,0,0.329821550236287,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0.8453114551668,0,0.657887425858975,15.4698931136585,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,3.62497769231668,0,0.193766729508018,0.993195428733726,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.977931553462932,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p1@GATA1 | |||
}} |
Revision as of 12:06, 14 September 2013
Short description: | p1@GATA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GATA1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 2bp_to_NM_002049, uc004dkq.3_5end |
EntrezGene: | GATA1 |
HGNC: | 4170 |
UniProt: | P15976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.46e-19 | 108 |
common myeloid progenitor | 4.46e-19 | 108 |
mast cell | 1.11e-18 | 5 |
basophil mast progenitor cell | 1.11e-18 | 5 |
granulocyte | 6.72e-15 | 8 |
hematopoietic stem cell | 8.93e-14 | 168 |
hematopoietic cell | 1.10e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 161 |
neutrophil | 5.28e-11 | 3 |
blood cell | 1.16e-10 | 11 |
endocrine cell | 3.20e-10 | 9 |
erythroid lineage cell | 5.67e-09 | 2 |
erythroblast | 5.67e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 5.67e-09 | 2 |
erythroid progenitor cell | 5.67e-09 | 2 |
reticulocyte | 5.67e-09 | 2 |
proerythroblast | 5.67e-09 | 2 |
basophilic erythroblast | 5.67e-09 | 2 |
polychromatophilic erythroblast | 5.67e-09 | 2 |
orthochromatic erythroblast | 5.67e-09 | 2 |
eosinophil | 1.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.82e-22 | 15 |
haemolymphatic fluid | 8.82e-22 | 15 |
organism substance | 8.82e-22 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.40e-23 | 31 |
chronic leukemia | 1.05e-22 | 8 |
leukemia | 1.14e-17 | 39 |
hematologic cancer | 1.19e-12 | 51 |
immune system cancer | 1.19e-12 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.