FFCP PHASE1:Hg19::chrX:46433143..46433164,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56548|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13817|TSSclassifier=S|UniProt=Q9NS84|association_with_transcript=-27bp_to_NM_019886,uc004dgt.2_5end|coexpression_cluster_id=C0|description=CAGE_peak_4_at_CHST7_5end|id=chrX:46433143..46433164,+|ontology_enrichment_celltype=CL:0002057!1.98e-16!42;CL:0000860!1.33e-13!45;CL:0002194!3.53e-12!63;CL:0000576!3.53e-12!63;CL:0000040!3.53e-12!63;CL:0000559!3.53e-12!63;CL:0002009!2.93e-11!65;CL:0000766!3.19e-09!76;CL:0000839!1.53e-08!70;CL:0000557!2.51e-08!71;CL:0002087!9.97e-08!119|ontology_enrichment_celltype_v019=CL:0000860;3.95e-18;33!CL:0002057;3.95e-18;33!CL:0000473;2.77e-15;39!CL:0000234;2.77e-15;39!CL:0000576;1.26e-12;48!CL:0000766;1.25e-09;69|ontology_enrichment_celltype_v019_2=CL:0000473,1.02e-25,48;CL:0000234,1.02e-25,48;CL:0000860,5.00e-25,42;CL:0002057,5.00e-25,42;CL:0002194,2.76e-18,59;CL:0000576,2.76e-18,59;CL:0000040,2.76e-18,59;CL:0000559,2.76e-18,59;CL:0002009,2.44e-17,61;CL:0000766,1.87e-16,72;CL:0000839,3.08e-15,66;CL:0000557,7.39e-15,67;CL:0000738,9.69e-10,136;CL:0002087,3.87e-09,115;CL:0000763,5.71e-09,108;CL:0000049,5.71e-09,108;CL:0000034,4.41e-08,441;CL:0000048,6.69e-08,427;CL:0002031,8.92e-08,120;CL:0000723,1.84e-07,433;CL:0002320,2.79e-07,361;CL:0000134,3.92e-07,354|ontology_enrichment_development_v019=CL:0002057;3.48e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.29e-09!216;UBERON:0002371!5.03e-07!80;UBERON:0002204!7.34e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-12,76;UBERON:0001474,8.98e-12,82;UBERON:0003081,1.66e-11,203;UBERON:0004765,1.73e-10,90;UBERON:0002405,2.95e-10,93;UBERON:0002390,1.04e-09,98;UBERON:0003061,1.04e-09,98;UBERON:0000926,1.11e-09,315;UBERON:0004120,1.11e-09,315;UBERON:0006603,1.11e-09,315;UBERON:0001434,3.99e-09,100;UBERON:0002193,1.20e-08,108;UBERON:0002384,7.28e-07,371|phase1_expression=0,0,0.422863212287913,1.0007329835313,0,2.61701557230111,5.06599756336621,0.631719873426831,0.522371256399677,1.22866968250754,3.48900583986214,0,0,0.247532705920093,0.994192127183747,0,0.602694528023977,0,0.975865597581014,0.61560529038394,0.204000691244253,0.940364164434263,0.572471974262113,0.547497700291537,0.502170558379211,0.840547463227464,0.57470412614962,0.550975469195755,0.786728553697808,0,0.309632246632152,0,0.6024118375565,0.739508020333575,0,0,0,2.21598163412751,1.60435557976113,0.868043482863407,0.671746422719773,0.647787332037959,0.257575567634187,1.01778767145695,3.02300754951048,2.66842467306598,3.71886459049095,6.57868620834921,9.91060386864331,0.863077176966451,0.768482119587302,0.945928919554341,8.61864201841546,6.45484683583826,6.77132432971709,1.88242339542605,4.36649840092553,4.04502272001152,4.59125838556354,6.73950956859797,10.8687311385837,0,0.797854630486527,0,2.90209238628584,6.24123747160254,6.22822248995575,1.50749199154046,0.521482918420201,0.65156653411535,4.23779651843358,4.05105399586321,9.81033401066742,2.32380814943136,2.33864729961548,1.04829322754188,0.898629049171961,1.05123824989054,0.16072558669708,0.570025487482497,1.19350006319454,1.27864907635244,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,0,0,1.32171328579026,2.24203425192614,0,0.983548850569165,0.393010762749165,0.616804496998528,1.33749196312542,0.651844533267181,1.4203434172042,0,0.668462741311041,0.883817722424512,0.443067789167242,1.35401931882508,0.640456598628376,1.1705341280389,0.657751618414705,0.829050053357545,0.579606171470105,0.14828656316206,0.267540828089713,0,0.793165398882963,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0.950452044448374,0.752875595388864,0.639933055772092,1.24930726552346,1.18388626022008,0,1.20964045934839,1.06976078313403,0.289648807765598,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.614843499851882,0.458426764241994,0.364295288292542,0.370784442784429,0.649094787309367,0.696518949197069,0.930705723632056,0,0,0,0.198762407366705,0,1.38856200643038,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,1.46437234528902,0,1.62028389576352,0.267899184852239,2.2452937262617,0.563057402416611,0,0.949265659568129,0.916008719652036,2.63560834872127,0,1.74437620857014,0,0.633152558322899,0.529636723252875,0.573673241497627,0.354668382198357,0.560677600142307,2.1349799145941,1.2333377420858,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,0,0.468642863667593,0.936480230490962,1.1409436430889,1.04614076386261,0,0,0,1.22492502752936,0.368502951935304,0.929932030581889,0,0.989067717114227,0.910161361938026,6.46756327634615,0.505008341862199,0.500474079487857,0.554128230968366,0,0.919463387397059,1.35214253015937,0.680593098960126,1.25572744982203,0,0.423863802319124,0.600182192168805,0.206105058476878,0,0.1861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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56548 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13817 | |||
|TSSclassifier=S | |||
|UniProt=Q9NS84 | |||
|association_with_transcript=-27bp_to_NM_019886,uc004dgt.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_CHST7_5end | |||
|id=chrX:46433143..46433164,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.98e-16!42;CL:0000860!1.33e-13!45;CL:0002194!3.53e-12!63;CL:0000576!3.53e-12!63;CL:0000040!3.53e-12!63;CL:0000559!3.53e-12!63;CL:0002009!2.93e-11!65;CL:0000766!3.19e-09!76;CL:0000839!1.53e-08!70;CL:0000557!2.51e-08!71;CL:0002087!9.97e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.95e-18;33!CL:0002057;3.95e-18;33!CL:0000473;2.77e-15;39!CL:0000234;2.77e-15;39!CL:0000576;1.26e-12;48!CL:0000766;1.25e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.02e-25,48;CL:0000234,1.02e-25,48;CL:0000860,5.00e-25,42;CL:0002057,5.00e-25,42;CL:0002194,2.76e-18,59;CL:0000576,2.76e-18,59;CL:0000040,2.76e-18,59;CL:0000559,2.76e-18,59;CL:0002009,2.44e-17,61;CL:0000766,1.87e-16,72;CL:0000839,3.08e-15,66;CL:0000557,7.39e-15,67;CL:0000738,9.69e-10,136;CL:0002087,3.87e-09,115;CL:0000763,5.71e-09,108;CL:0000049,5.71e-09,108;CL:0000034,4.41e-08,441;CL:0000048,6.69e-08,427;CL:0002031,8.92e-08,120;CL:0000723,1.84e-07,433;CL:0002320,2.79e-07,361;CL:0000134,3.92e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.29e-09!216;UBERON:0002371!5.03e-07!80;UBERON:0002204!7.34e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-12,76;UBERON:0001474,8.98e-12,82;UBERON:0003081,1.66e-11,203;UBERON:0004765,1.73e-10,90;UBERON:0002405,2.95e-10,93;UBERON:0002390,1.04e-09,98;UBERON:0003061,1.04e-09,98;UBERON:0000926,1.11e-09,315;UBERON:0004120,1.11e-09,315;UBERON:0006603,1.11e-09,315;UBERON:0001434,3.99e-09,100;UBERON:0002193,1.20e-08,108;UBERON:0002384,7.28e-07,371 | |||
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| |||
|short_description=p4@CHST7 | |||
}} |
Revision as of 11:58, 14 September 2013
Short description: | p4@CHST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHST7_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -27bp_to_NM_019886, uc004dgt.2_5end |
EntrezGene: | CHST7 |
HGNC: | 13817 |
UniProt: | Q9NS84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.02e-25 | 48 |
phagocyte | 1.02e-25 | 48 |
classical monocyte | 5.00e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.00e-25 | 42 |
monopoietic cell | 2.76e-18 | 59 |
monocyte | 2.76e-18 | 59 |
monoblast | 2.76e-18 | 59 |
promonocyte | 2.76e-18 | 59 |
macrophage dendritic cell progenitor | 2.44e-17 | 61 |
myeloid leukocyte | 1.87e-16 | 72 |
myeloid lineage restricted progenitor cell | 3.08e-15 | 66 |
granulocyte monocyte progenitor cell | 7.39e-15 | 67 |
leukocyte | 9.69e-10 | 136 |
nongranular leukocyte | 3.87e-09 | 115 |
myeloid cell | 5.71e-09 | 108 |
common myeloid progenitor | 5.71e-09 | 108 |
stem cell | 4.41e-08 | 441 |
multi fate stem cell | 6.69e-08 | 427 |
hematopoietic lineage restricted progenitor cell | 8.92e-08 | 120 |
somatic stem cell | 1.84e-07 | 433 |
connective tissue cell | 2.79e-07 | 361 |
mesenchymal cell | 3.92e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-12 | 76 |
bone element | 8.98e-12 | 82 |
lateral plate mesoderm | 1.66e-11 | 203 |
skeletal element | 1.73e-10 | 90 |
immune system | 2.95e-10 | 93 |
hematopoietic system | 1.04e-09 | 98 |
blood island | 1.04e-09 | 98 |
mesoderm | 1.11e-09 | 315 |
mesoderm-derived structure | 1.11e-09 | 315 |
presumptive mesoderm | 1.11e-09 | 315 |
skeletal system | 3.99e-09 | 100 |
hemolymphoid system | 1.20e-08 | 108 |
connective tissue | 7.28e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.