FFCP PHASE1:Hg19::chrX:23802434..23802449,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6303|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10540|TSSclassifier=N|UniProt=|association_with_transcript=-420bp_to_ENST00000474223_5end|coexpression_cluster_id=C0|description=CAGE_peak_6_at_SAT1_5end|id=chrX:23802434..23802449,+|ontology_enrichment_celltype=CL:0002057!1.79e-41!42;CL:0000860!6.13e-39!45;CL:0000766!6.53e-33!76;CL:0002194!7.27e-32!63;CL:0000576!7.27e-32!63;CL:0000040!7.27e-32!63;CL:0000559!7.27e-32!63;CL:0002009!1.20e-31!65;CL:0000557!1.89e-31!71;CL:0000839!7.25e-31!70;CL:0000738!1.01e-21!140;CL:0002087!9.88e-20!119;CL:0000763!1.45e-19!112;CL:0000049!1.45e-19!112;CL:0002031!4.67e-19!124;CL:0000037!7.30e-15!172;CL:0000566!7.30e-15!172;CL:0002032!5.39e-14!165;CL:0000837!5.39e-14!165;CL:0000988!9.16e-13!182;CL:0002393!3.68e-07!9;CL:0002397!3.68e-07!9|ontology_enrichment_celltype_v019=CL:0000860;4.69e-105;33!CL:0002057;4.69e-105;33!CL:0000473;2.97e-77;39!CL:0000234;2.97e-77;39!CL:0000576;2.14e-69;48!CL:0000766;5.19e-41;69!CL:0000763;8.96e-20;100!CL:0002087;3.71e-16;104!CL:0000738;1.85e-12;136!CL:0002393;8.51e-07;6!CL:0002397;8.51e-07;6|ontology_enrichment_celltype_v019_2=CL:0000860,3.30e-115,42;CL:0002057,3.30e-115,42;CL:0000473,2.05e-106,48;CL:0000234,2.05e-106,48;CL:0002194,1.27e-88,59;CL:0000576,1.27e-88,59;CL:0000040,1.27e-88,59;CL:0000559,1.27e-88,59;CL:0002009,1.64e-85,61;CL:0000766,3.03e-80,72;CL:0000839,1.50e-78,66;CL:0000557,2.80e-77,67;CL:0000763,4.33e-51,108;CL:0000049,4.33e-51,108;CL:0002087,1.28e-44,115;CL:0002031,1.90e-42,120;CL:0000738,2.71e-41,136;CL:0002032,1.18e-33,161;CL:0000837,1.18e-33,161;CL:0000037,6.43e-32,168;CL:0000988,6.90e-30,177;CL:0000134,1.32e-12,354;CL:0002320,3.40e-12,361;CL:0000219,9.46e-11,386;CL:0000048,9.06e-10,427;CL:0000723,1.63e-09,433;CL:0000034,3.51e-09,441;CL:0002393,1.41e-07,9;CL:0002397,1.41e-07,9|ontology_enrichment_development_v019=CL:0002057;5.20e-83;42!CL:0000049;3.28e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.78e-28!80;UBERON:0002390!7.11e-28!102;UBERON:0003061!7.11e-28!102;UBERON:0001474!1.70e-24!86;UBERON:0002193!4.25e-24!112;UBERON:0002405!2.92e-21!115;UBERON:0004765!6.45e-19!101;UBERON:0001434!6.45e-19!101;UBERON:0003081!4.37e-11!216;UBERON:0002204!2.36e-09!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.47e-67,76;UBERON:0001474,6.69e-62,82;UBERON:0004765,9.05e-56,90;UBERON:0002390,7.44e-54,98;UBERON:0003061,7.44e-54,98;UBERON:0002405,9.70e-54,93;UBERON:0001434,1.80e-49,100;UBERON:0002193,3.50e-48,108;UBERON:0002204,2.10e-28,167;UBERON:0003081,1.57e-23,203;UBERON:0000926,3.32e-14,315;UBERON:0004120,3.32e-14,315;UBERON:0006603,3.32e-14,315;UBERON:0002384,1.23e-11,371|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,1.08371286321253,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,1.56740831967947,0.647787332037959,0.257575567634187,1.16318591023652,2.64513160582167,1.21292030593908,1.62700325833979,1.6446715520873,5.26500830521676,3.16461631554365,1.7931249457037,4.25668013799453,3.44745680736619,5.16387746867061,5.41705946377367,2.82363509313907,4.63940455098338,6.06753408001728,8.87643287875617,2.88836124368484,16.6227652707751,1.31940520074686,3.78980949481101,2.13112375266347,8.12585868160035,2.8369261234557,9.34233373493363,5.7787193009051,6.77927793946262,5.64690996233303,6.05399502633369,0.368277635987565,8.22802207346299,0.211255286311942,1.70083439972035,1.04829322754188,0.898629049171961,1.50176892841506,0.964353520182481,0.570025487482497,1.39241674039363,0.730656615058536,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0,0.221533894583621,0.541607727530031,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.710019185033229,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0.708875486211932,0,0.290633938513962,0,0,0.176096868026452,0.414656231081544,0.720599767084807,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,8.433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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10540 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-420bp_to_ENST00000474223_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_SAT1_5end | |||
|id=chrX:23802434..23802449,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.79e-41!42;CL:0000860!6.13e-39!45;CL:0000766!6.53e-33!76;CL:0002194!7.27e-32!63;CL:0000576!7.27e-32!63;CL:0000040!7.27e-32!63;CL:0000559!7.27e-32!63;CL:0002009!1.20e-31!65;CL:0000557!1.89e-31!71;CL:0000839!7.25e-31!70;CL:0000738!1.01e-21!140;CL:0002087!9.88e-20!119;CL:0000763!1.45e-19!112;CL:0000049!1.45e-19!112;CL:0002031!4.67e-19!124;CL:0000037!7.30e-15!172;CL:0000566!7.30e-15!172;CL:0002032!5.39e-14!165;CL:0000837!5.39e-14!165;CL:0000988!9.16e-13!182;CL:0002393!3.68e-07!9;CL:0002397!3.68e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-105;33!CL:0002057;4.69e-105;33!CL:0000473;2.97e-77;39!CL:0000234;2.97e-77;39!CL:0000576;2.14e-69;48!CL:0000766;5.19e-41;69!CL:0000763;8.96e-20;100!CL:0002087;3.71e-16;104!CL:0000738;1.85e-12;136!CL:0002393;8.51e-07;6!CL:0002397;8.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.30e-115,42;CL:0002057,3.30e-115,42;CL:0000473,2.05e-106,48;CL:0000234,2.05e-106,48;CL:0002194,1.27e-88,59;CL:0000576,1.27e-88,59;CL:0000040,1.27e-88,59;CL:0000559,1.27e-88,59;CL:0002009,1.64e-85,61;CL:0000766,3.03e-80,72;CL:0000839,1.50e-78,66;CL:0000557,2.80e-77,67;CL:0000763,4.33e-51,108;CL:0000049,4.33e-51,108;CL:0002087,1.28e-44,115;CL:0002031,1.90e-42,120;CL:0000738,2.71e-41,136;CL:0002032,1.18e-33,161;CL:0000837,1.18e-33,161;CL:0000037,6.43e-32,168;CL:0000988,6.90e-30,177;CL:0000134,1.32e-12,354;CL:0002320,3.40e-12,361;CL:0000219,9.46e-11,386;CL:0000048,9.06e-10,427;CL:0000723,1.63e-09,433;CL:0000034,3.51e-09,441;CL:0002393,1.41e-07,9;CL:0002397,1.41e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.20e-83;42!CL:0000049;3.28e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.78e-28!80;UBERON:0002390!7.11e-28!102;UBERON:0003061!7.11e-28!102;UBERON:0001474!1.70e-24!86;UBERON:0002193!4.25e-24!112;UBERON:0002405!2.92e-21!115;UBERON:0004765!6.45e-19!101;UBERON:0001434!6.45e-19!101;UBERON:0003081!4.37e-11!216;UBERON:0002204!2.36e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.47e-67,76;UBERON:0001474,6.69e-62,82;UBERON:0004765,9.05e-56,90;UBERON:0002390,7.44e-54,98;UBERON:0003061,7.44e-54,98;UBERON:0002405,9.70e-54,93;UBERON:0001434,1.80e-49,100;UBERON:0002193,3.50e-48,108;UBERON:0002204,2.10e-28,167;UBERON:0003081,1.57e-23,203;UBERON:0000926,3.32e-14,315;UBERON:0004120,3.32e-14,315;UBERON:0006603,3.32e-14,315;UBERON:0002384,1.23e-11,371 | |||
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| |||
|short_description=p6@SAT1 | |||
}} |
Revision as of 11:37, 14 September 2013
Short description: | p6@SAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -420bp_to_ENST00000474223_5end |
EntrezGene: | SAT1 |
HGNC: | 10540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.30e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-115 | 42 |
defensive cell | 2.05e-106 | 48 |
phagocyte | 2.05e-106 | 48 |
monopoietic cell | 1.27e-88 | 59 |
monocyte | 1.27e-88 | 59 |
monoblast | 1.27e-88 | 59 |
promonocyte | 1.27e-88 | 59 |
macrophage dendritic cell progenitor | 1.64e-85 | 61 |
myeloid leukocyte | 3.03e-80 | 72 |
myeloid lineage restricted progenitor cell | 1.50e-78 | 66 |
granulocyte monocyte progenitor cell | 2.80e-77 | 67 |
myeloid cell | 4.33e-51 | 108 |
common myeloid progenitor | 4.33e-51 | 108 |
nongranular leukocyte | 1.28e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 1.90e-42 | 120 |
leukocyte | 2.71e-41 | 136 |
hematopoietic oligopotent progenitor cell | 1.18e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-33 | 161 |
hematopoietic stem cell | 6.43e-32 | 168 |
hematopoietic cell | 6.90e-30 | 177 |
mesenchymal cell | 1.32e-12 | 354 |
connective tissue cell | 3.40e-12 | 361 |
motile cell | 9.46e-11 | 386 |
multi fate stem cell | 9.06e-10 | 427 |
somatic stem cell | 1.63e-09 | 433 |
stem cell | 3.51e-09 | 441 |
intermediate monocyte | 1.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.41e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.47e-67 | 76 |
bone element | 6.69e-62 | 82 |
skeletal element | 9.05e-56 | 90 |
hematopoietic system | 7.44e-54 | 98 |
blood island | 7.44e-54 | 98 |
immune system | 9.70e-54 | 93 |
skeletal system | 1.80e-49 | 100 |
hemolymphoid system | 3.50e-48 | 108 |
musculoskeletal system | 2.10e-28 | 167 |
lateral plate mesoderm | 1.57e-23 | 203 |
mesoderm | 3.32e-14 | 315 |
mesoderm-derived structure | 3.32e-14 | 315 |
presumptive mesoderm | 3.32e-14 | 315 |
connective tissue | 1.23e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.