FFCP PHASE1:Hg19::chrX:17393317..17393351,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4810 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7820 | |||
|TSSclassifier=W | |||
|UniProt=Q6T4R5 | |||
|association_with_transcript=-191bp_to_ENST00000380060,NM_198270,uc004cxx.2,uc011mix.1_5end | |||
|description=CAGE_peak_2_at_NHS_5end | |||
|id=chrX:17393317..17393351,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.24e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.49e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.32e-08;10!UBERON:0005564;4.32e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.00e-15!106;DOID:0050687!4.07e-15!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.50e-15,143;DOID:305,5.63e-14,106;DOID:162,1.76e-07,235;DOID:14566,3.80e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.12e-15!365;UBERON:0000481!1.61e-13!347;UBERON:0000062!3.42e-12!511;UBERON:0000468!1.01e-11!659;UBERON:0000064!6.46e-11!219;UBERON:0000477!8.85e-10!286;UBERON:0000467!1.60e-09!625;UBERON:0000480!2.44e-09!626;UBERON:0000033!4.24e-09!123;UBERON:0001048!4.39e-09!168;UBERON:0000153!6.49e-09!129;UBERON:0007811!6.49e-09!129;UBERON:0000483!7.71e-09!309;UBERON:0000922!9.38e-09!612;UBERON:0004121!9.90e-09!169;UBERON:0004111!1.67e-08!241;UBERON:0000119!1.82e-08!312;UBERON:0005156!2.14e-08!59;UBERON:0000990!2.14e-08!59;UBERON:0003075!3.40e-08!86;UBERON:0007284!3.40e-08!86;UBERON:0003133!7.62e-08!48;UBERON:0000924!9.26e-08!173;UBERON:0006601!9.26e-08!173;UBERON:0004176!1.28e-07!22;UBERON:0007023!1.36e-07!115;UBERON:0001017!1.96e-07!82;UBERON:0004119!2.33e-07!169;UBERON:0000925!2.33e-07!169;UBERON:0006595!2.33e-07!169;UBERON:0002050!2.76e-07!605;UBERON:0005423!2.76e-07!605;UBERON:0000991!2.99e-07!21;UBERON:0009196!2.99e-07!21;UBERON:0009117!2.99e-07!21;UBERON:0005564!2.99e-07!21;UBERON:0005743!3.04e-07!86;UBERON:0001049!4.93e-07!57;UBERON:0005068!4.93e-07!57;UBERON:0006241!4.93e-07!57;UBERON:0007135!4.93e-07!57;UBERON:0000923!5.37e-07!604;UBERON:0005291!5.37e-07!604;UBERON:0006598!5.37e-07!604;UBERON:0002532!5.37e-07!604;UBERON:0002346!6.92e-07!90;UBERON:0000464!8.87e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.67e-07;11!UBERON:0003133;5.26e-07;44!UBERON:0000991;5.64e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.94e-09,48;UBERON:0005156,2.17e-08,59;UBERON:0000990,2.17e-08,59;UBERON:0003135,1.18e-07,11;UBERON:0004176,1.41e-07,22;UBERON:0000991,4.27e-07,21;UBERON:0009196,4.27e-07,21;UBERON:0009117,4.27e-07,21;UBERON:0005564,4.27e-07,21 | |||
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| |||
|short_description=p2@NHS | |||
}} |
Revision as of 11:30, 14 September 2013
Short description: | p2@NHS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NHS_5end |
Coexpression cluster: | NA |
Association with transcript: | -191bp_to_ENST00000380060, NM_198270, uc004cxx.2, uc011mix.1_5end |
EntrezGene: | NHS |
HGNC: | 7820 |
UniProt: | Q6T4R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.49e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 2.94e-09 | 48 |
reproductive structure | 2.17e-08 | 59 |
reproductive system | 2.17e-08 | 59 |
male reproductive organ | 1.18e-07 | 11 |
external genitalia | 1.41e-07 | 22 |
gonad | 4.27e-07 | 21 |
indifferent external genitalia | 4.27e-07 | 21 |
indifferent gonad | 4.27e-07 | 21 |
gonad primordium | 4.27e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.50e-15 | 143 |
carcinoma | 5.63e-14 | 106 |
cancer | 1.76e-07 | 235 |
disease of cellular proliferation | 3.80e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.