FFCP PHASE1:Mm9::chr7:117916919..117916937,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11717|HGNC=|MCL_coexpression_id=116|UniProt=F6XQD0|association_with_transcript=-248bp_to_ENSMUST00000143786_5end|description=CAGE_peak_15_at_Ampd3_5end|id=chr7:117916919..117916937,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,7.53e-20,4;CL:0000766,7.53e-20,4;CL:0000234,7.53e-20,4;CL:0000576,7.53e-20,4;CL:0000235,7.53e-20,4;CL:0000864,7.53e-20,4;CL:0002009,7.53e-20,4;CL:0000040,7.53e-20,4;CL:0000559,7.53e-20,4;CL:0002092,1.30e-15,3;CL:0002540,1.30e-15,3;CL:0000473,1.90e-11,7;CL:0000557,1.90e-11,7;CL:0002476,6.17e-11,2;CL:0000878,1.36e-10,2;CL:0000129,1.36e-10,2;CL:0000738,5.27e-07,17;CL:0002087,5.27e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.26e-16,3;DOID:4045,3.26e-16,3;DOID:0050686,2.33e-08,6|ontology_enrichment_uberon=UBERON:0002204!4.57e-11!32;UBERON:0001474!4.81e-10!22;UBERON:0004765!4.81e-10!22;UBERON:0001434!4.81e-10!22;UBERON:0002371!7.86e-09!16;UBERON:0002193!7.95e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.98e-17,32;UBERON:0002371,1.78e-14,16;UBERON:0001474,2.47e-13,22;UBERON:0004765,2.47e-13,22;UBERON:0001434,2.47e-13,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0.315462165358238,0.822686601634433,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,10.4632907684227,6.2506827561904,11.5175223674236,11.7646297606203,10.2456822743767,11.6522484727477,0,0,0,0,0,0,0,0.279972843250725,0,1.00669563634642,0,0,0.257259436035947,0,0,0,0,0,0,0,5.84934816232909,8.89979726310277,2.8419204597844,1.49800055259202,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,1.12552522006336,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,1.15078454980324,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,6.03165135757089,3.80733978673097,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0.619160603889667,1.11116716421827,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.320125762024346,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0,0,0.220591419119515,0|short_description=p15@Ampd3}} | ||
|EntrezGene=11717 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|UniProt=F6XQD0 | |||
|association_with_transcript=-248bp_to_ENSMUST00000143786_5end | |||
|description=CAGE_peak_15_at_Ampd3_5end | |||
|id=chr7:117916919..117916937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.53e-20,4;CL:0000766,7.53e-20,4;CL:0000234,7.53e-20,4;CL:0000576,7.53e-20,4;CL:0000235,7.53e-20,4;CL:0000864,7.53e-20,4;CL:0002009,7.53e-20,4;CL:0000040,7.53e-20,4;CL:0000559,7.53e-20,4;CL:0002092,1.30e-15,3;CL:0002540,1.30e-15,3;CL:0000473,1.90e-11,7;CL:0000557,1.90e-11,7;CL:0002476,6.17e-11,2;CL:0000878,1.36e-10,2;CL:0000129,1.36e-10,2;CL:0000738,5.27e-07,17;CL:0002087,5.27e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.26e-16,3;DOID:4045,3.26e-16,3;DOID:0050686,2.33e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.57e-11!32;UBERON:0001474!4.81e-10!22;UBERON:0004765!4.81e-10!22;UBERON:0001434!4.81e-10!22;UBERON:0002371!7.86e-09!16;UBERON:0002193!7.95e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.98e-17,32;UBERON:0002371,1.78e-14,16;UBERON:0001474,2.47e-13,22;UBERON:0004765,2.47e-13,22;UBERON:0001434,2.47e-13,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0.315462165358238,0.822686601634433,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,10.4632907684227,6.2506827561904,11.5175223674236,11.7646297606203,10.2456822743767,11.6522484727477,0,0,0,0,0,0,0,0.279972843250725,0,1.00669563634642,0,0,0.257259436035947,0,0,0,0,0,0,0,5.84934816232909,8.89979726310277,2.8419204597844,1.49800055259202,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,1.12552522006336,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,1.15078454980324,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,6.03165135757089,3.80733978673097,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0.619160603889667,1.11116716421827,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.320125762024346,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0,0,0.220591419119515,0 | |||
|short_description=p15@Ampd3 | |||
}} |
Revision as of 11:28, 14 September 2013
Short description: | p15@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Ampd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -248bp_to_ENSMUST00000143786_5end |
EntrezGene: | Ampd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.53e-20 | 4 |
myeloid leukocyte | 7.53e-20 | 4 |
phagocyte | 7.53e-20 | 4 |
monocyte | 7.53e-20 | 4 |
macrophage | 7.53e-20 | 4 |
tissue-resident macrophage | 7.53e-20 | 4 |
macrophage dendritic cell progenitor | 7.53e-20 | 4 |
monoblast | 7.53e-20 | 4 |
promonocyte | 7.53e-20 | 4 |
bone marrow cell | 1.30e-15 | 3 |
mesenchymal stem cell of the bone marrow | 1.30e-15 | 3 |
defensive cell | 1.90e-11 | 7 |
granulocyte monocyte progenitor cell | 1.90e-11 | 7 |
bone marrow macrophage | 6.17e-11 | 2 |
central nervous system macrophage | 1.36e-10 | 2 |
microglial cell | 1.36e-10 | 2 |
leukocyte | 5.27e-07 | 17 |
nongranular leukocyte | 5.27e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.98e-17 | 32 |
bone marrow | 1.78e-14 | 16 |
bone element | 2.47e-13 | 22 |
skeletal element | 2.47e-13 | 22 |
skeletal system | 2.47e-13 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.26e-16 | 3 |
muscle cancer | 3.26e-16 | 3 |
organ system cancer | 2.33e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.