FFCP PHASE1:Mm9::chr6:78328916..78328955,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30053|HGNC=|MCL_coexpression_id=23|UniProt=Q9QUS9,G3UWG6|association_with_transcript=-57bp_to_ENSMUST00000089667,ENSMUST00000167492,NM_001161741,NM_013893,uc009cjx.2,uc012enn.1_5end|description=CAGE_peak_1_at_Reg3d_5end|id=chr6:78328916..78328955,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.87e-39!59;UBERON:0000160!2.89e-29!43;UBERON:0001045!6.01e-22!13;UBERON:0004921!1.26e-21!126;UBERON:0004185!1.26e-21!126;UBERON:0001007!4.31e-21!128;UBERON:0001555!4.31e-21!128;UBERON:0007026!4.31e-21!128;UBERON:0004119!1.42e-20!130;UBERON:0000925!1.42e-20!130;UBERON:0006595!1.42e-20!130;UBERON:0001264!1.54e-20!12;UBERON:0003922!1.54e-20!12;UBERON:0002114!1.54e-20!12;UBERON:0003923!1.54e-20!12;UBERON:0003924!1.54e-20!12;UBERON:0003921!1.54e-20!12;UBERON:0002075!1.99e-20!19;UBERON:0002108!3.52e-17!16;UBERON:0001041!5.30e-10!92;UBERON:0000945!1.35e-09!16;UBERON:0010039!1.35e-09!16;UBERON:0000077!4.60e-09!97;UBERON:0002323!2.62e-08!37;UBERON:0004458!2.62e-08!37;UBERON:0003886!5.58e-08!38;UBERON:0000481!7.61e-08!230;UBERON:0002553!1.14e-07!39;UBERON:0005177!7.00e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.96e-27,12;UBERON:0002075,2.59e-16,19;UBERON:0005409,1.81e-15,47;UBERON:0000160,2.31e-13,31;UBERON:0002323,3.16e-07,37;UBERON:0004458,3.16e-07,37;UBERON:0003886,5.62e-07,38;UBERON:0002553,9.70e-07,39|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,37.0412730052457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,0.264450566663544,0,0,0.257734922644187,3.42861991859682,1.55664630691409,6.65789691393957,9.01605216934572,1.15289268306808,13.069430857614,12.1363447945102,16.3769833180061,15.2799299471218,0.216138049874694,5.77509692437665,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,1.26289438973556,1.4351793081753,0.482443521363367,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,858.86104505956,0.242780636154981,3.02323556964751,38.6640413499591,62.6040012907238,178.619820955422,51.9440869268124,141.41462076675,242.061719923226,481.640019094184,592.452580191493,459.984522886913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0.82554747185289,0.740778109478847,0.565105371014073,0.546776910884101,0,0,0,0,42.9601778106801,0,1.21991680276109,0.540026704109006,0.418176592028937,2.62035076495413,4.85511646985355,2.14898984885873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,1.16965804222704,1.07435527024149,0,0,0|short_description=p1@Reg3d}} | ||
|EntrezGene=30053 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=Q9QUS9,G3UWG6 | |||
|association_with_transcript=-57bp_to_ENSMUST00000089667,ENSMUST00000167492,NM_001161741,NM_013893,uc009cjx.2,uc012enn.1_5end | |||
|description=CAGE_peak_1_at_Reg3d_5end | |||
|id=chr6:78328916..78328955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.87e-39!59;UBERON:0000160!2.89e-29!43;UBERON:0001045!6.01e-22!13;UBERON:0004921!1.26e-21!126;UBERON:0004185!1.26e-21!126;UBERON:0001007!4.31e-21!128;UBERON:0001555!4.31e-21!128;UBERON:0007026!4.31e-21!128;UBERON:0004119!1.42e-20!130;UBERON:0000925!1.42e-20!130;UBERON:0006595!1.42e-20!130;UBERON:0001264!1.54e-20!12;UBERON:0003922!1.54e-20!12;UBERON:0002114!1.54e-20!12;UBERON:0003923!1.54e-20!12;UBERON:0003924!1.54e-20!12;UBERON:0003921!1.54e-20!12;UBERON:0002075!1.99e-20!19;UBERON:0002108!3.52e-17!16;UBERON:0001041!5.30e-10!92;UBERON:0000945!1.35e-09!16;UBERON:0010039!1.35e-09!16;UBERON:0000077!4.60e-09!97;UBERON:0002323!2.62e-08!37;UBERON:0004458!2.62e-08!37;UBERON:0003886!5.58e-08!38;UBERON:0000481!7.61e-08!230;UBERON:0002553!1.14e-07!39;UBERON:0005177!7.00e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.96e-27,12;UBERON:0002075,2.59e-16,19;UBERON:0005409,1.81e-15,47;UBERON:0000160,2.31e-13,31;UBERON:0002323,3.16e-07,37;UBERON:0004458,3.16e-07,37;UBERON:0003886,5.62e-07,38;UBERON:0002553,9.70e-07,39 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,37.0412730052457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,0.264450566663544,0,0,0.257734922644187,3.42861991859682,1.55664630691409,6.65789691393957,9.01605216934572,1.15289268306808,13.069430857614,12.1363447945102,16.3769833180061,15.2799299471218,0.216138049874694,5.77509692437665,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,1.26289438973556,1.4351793081753,0.482443521363367,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,858.86104505956,0.242780636154981,3.02323556964751,38.6640413499591,62.6040012907238,178.619820955422,51.9440869268124,141.41462076675,242.061719923226,481.640019094184,592.452580191493,459.984522886913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0.82554747185289,0.740778109478847,0.565105371014073,0.546776910884101,0,0,0,0,42.9601778106801,0,1.21991680276109,0.540026704109006,0.418176592028937,2.62035076495413,4.85511646985355,2.14898984885873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,1.16965804222704,1.07435527024149,0,0,0 | |||
|short_description=p1@Reg3d | |||
}} |
Revision as of 10:39, 14 September 2013
Short description: | p1@Reg3d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reg3d_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | -57bp_to_ENSMUST00000089667, ENSMUST00000167492, NM_001161741, NM_013893, uc009cjx.2, uc012enn.1_5end |
EntrezGene: | Reg3d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 2.96e-27 | 12 |
viscus | 2.59e-16 | 19 |
gastrointestinal system | 1.81e-15 | 47 |
intestine | 2.31e-13 | 31 |
body cavity | 3.16e-07 | 37 |
body cavity or lining | 3.16e-07 | 37 |
body cavity precursor | 5.62e-07 | 38 |
anatomical cavity | 9.70e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.