FFCP PHASE1:Hg19::chrX:118753923..118753935,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23157|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=15848|TSSclassifier=S|UniProt=|association_with_transcript=-16bp_to_AL833677_5end|description=CAGE_peak_9_at_SEPT6_5end|id=chrX:118753923..118753935,-|ontology_enrichment_celltype=CL:0000037!3.77e-24!172;CL:0000566!3.77e-24!172;CL:0002032!1.21e-23!165;CL:0000837!1.21e-23!165;CL:0000988!8.52e-23!182;CL:0000738!2.60e-22!140;CL:0002087!3.82e-19!119;CL:0002031!2.69e-18!124;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!9.11e-13!52;CL:0000763!5.25e-11!112;CL:0000049!5.25e-11!112;CL:0002057!7.34e-09!42;CL:0000860!1.35e-08!45;CL:0000766!2.77e-08!76;CL:0000839!1.53e-07!70;CL:0000557!2.59e-07!71;CL:0000084!8.97e-07!25;CL:0000827!8.97e-07!25|ontology_enrichment_celltype_v019=CL:0000785;4.76e-13;1!CL:0002591;4.76e-13;1!CL:0000819;4.76e-13;1!CL:0000473;1.02e-08;39!CL:0000234;1.02e-08;39!CL:0000860;2.13e-08;33!CL:0002057;2.13e-08;33!CL:0000815;3.69e-07;2!CL:0000792;3.69e-07;2!CL:0002677;3.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0000819,2.32e-13,1;CL:0002591,6.06e-13,1;CL:0000473,2.12e-08,48;CL:0000234,2.12e-08,48;CL:0000785,2.58e-07,2;CL:0000955,2.58e-07,2;CL:0000818,2.58e-07,2;CL:0000954,2.58e-07,2;CL:0000816,2.58e-07,2;CL:0000815,3.93e-07,2;CL:0000792,3.93e-07,2;CL:0002677,3.93e-07,2;CL:0000860,7.30e-07,42;CL:0002057,7.30e-07,42|ontology_enrichment_development_v019=CL:0000954;3.69e-07;2|ontology_enrichment_disease=DOID:2531!3.09e-07!51;DOID:0060083!3.09e-07!51|ontology_enrichment_disease_v019=DOID:0060073;4.76e-13;1!DOID:8675;4.76e-13;1|ontology_enrichment_disease_v019_2=DOID:0060073,2.32e-13,1;DOID:8675,2.32e-13,1|ontology_enrichment_uberon=UBERON:0002390!4.16e-12!102;UBERON:0003061!4.16e-12!102;UBERON:0002193!2.88e-10!112;UBERON:0004177!1.97e-07!7|ontology_enrichment_uberon_v019=UBERON:0002370;2.28e-07;2!UBERON:0005058;2.28e-07;2!UBERON:0009113;2.28e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0008886;3.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003351,7.62e-09,6;UBERON:0000078,4.17e-07,2;UBERON:0007497,4.17e-07,2;UBERON:0003643,4.17e-07,2;UBERON:0003504,4.17e-07,2;UBERON:0003469,4.17e-07,2;UBERON:0003496,4.17e-07,2;UBERON:0002012,4.17e-07,2;UBERON:0008886,4.17e-07,2;UBERON:0007303,4.17e-07,2;UBERON:0002061,4.17e-07,2;UBERON:0005432,4.17e-07,2;UBERON:0004363,4.17e-07,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.164201178899891,0.236132343941038,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,1.35426486594342,0.376484679085209,0.818718450173537,0.224723484445085,0.306083892370903,0.641858054152187,1.27867425159808,0.659702600373432,1.19678194572979,0.426224750532694,0,0,0,1.00499466102697,0,1.08594422352558,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0.501559486172034,0.32592226663359,1.89379122293893,0,1.33692548262208,1.17842362989935,0.443067789167242,0.541607727530031,0.384273959177026,0.650296737799391,0.822189523018381,0.829050053357545,0.869409257205157,0.296573126324121,0.267540828089713,1.04535523804977,0.339928028092699,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.710331756132051,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.264145302039678,0.621984346622316,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.14140543195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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15848 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_AL833677_5end | |||
|description=CAGE_peak_9_at_SEPT6_5end | |||
|id=chrX:118753923..118753935,- | |||
|ontology_enrichment_celltype=CL:0000037!3.77e-24!172;CL:0000566!3.77e-24!172;CL:0002032!1.21e-23!165;CL:0000837!1.21e-23!165;CL:0000988!8.52e-23!182;CL:0000738!2.60e-22!140;CL:0002087!3.82e-19!119;CL:0002031!2.69e-18!124;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!9.11e-13!52;CL:0000763!5.25e-11!112;CL:0000049!5.25e-11!112;CL:0002057!7.34e-09!42;CL:0000860!1.35e-08!45;CL:0000766!2.77e-08!76;CL:0000839!1.53e-07!70;CL:0000557!2.59e-07!71;CL:0000084!8.97e-07!25;CL:0000827!8.97e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000785;4.76e-13;1!CL:0002591;4.76e-13;1!CL:0000819;4.76e-13;1!CL:0000473;1.02e-08;39!CL:0000234;1.02e-08;39!CL:0000860;2.13e-08;33!CL:0002057;2.13e-08;33!CL:0000815;3.69e-07;2!CL:0000792;3.69e-07;2!CL:0002677;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.32e-13,1;CL:0002591,6.06e-13,1;CL:0000473,2.12e-08,48;CL:0000234,2.12e-08,48;CL:0000785,2.58e-07,2;CL:0000955,2.58e-07,2;CL:0000818,2.58e-07,2;CL:0000954,2.58e-07,2;CL:0000816,2.58e-07,2;CL:0000815,3.93e-07,2;CL:0000792,3.93e-07,2;CL:0002677,3.93e-07,2;CL:0000860,7.30e-07,42;CL:0002057,7.30e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000954;3.69e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!3.09e-07!51;DOID:0060083!3.09e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.76e-13;1!DOID:8675;4.76e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.32e-13,1;DOID:8675,2.32e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.16e-12!102;UBERON:0003061!4.16e-12!102;UBERON:0002193!2.88e-10!112;UBERON:0004177!1.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.28e-07;2!UBERON:0005058;2.28e-07;2!UBERON:0009113;2.28e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0008886;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003351,7.62e-09,6;UBERON:0000078,4.17e-07,2;UBERON:0007497,4.17e-07,2;UBERON:0003643,4.17e-07,2;UBERON:0003504,4.17e-07,2;UBERON:0003469,4.17e-07,2;UBERON:0003496,4.17e-07,2;UBERON:0002012,4.17e-07,2;UBERON:0008886,4.17e-07,2;UBERON:0007303,4.17e-07,2;UBERON:0002061,4.17e-07,2;UBERON:0005432,4.17e-07,2;UBERON:0004363,4.17e-07,2 | |||
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| |||
|short_description=p9@SEPT6 | |||
}} |
Revision as of 10:33, 14 September 2013
Short description: | p9@SEPT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SEPT6_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_AL833677_5end |
EntrezGene: | SEPT6 |
HGNC: | 15848 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.32e-13 | 1 |
smooth muscle cell of the pulmonary artery | 6.06e-13 | 1 |
defensive cell | 2.12e-08 | 48 |
phagocyte | 2.12e-08 | 48 |
mature B cell | 2.58e-07 | 2 |
pre-B-II cell | 2.58e-07 | 2 |
transitional stage B cell | 2.58e-07 | 2 |
small pre-B-II cell | 2.58e-07 | 2 |
immature B cell | 2.58e-07 | 2 |
regulatory T cell | 3.93e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.93e-07 | 2 |
naive regulatory T cell | 3.93e-07 | 2 |
classical monocyte | 7.30e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.30e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
pharyngeal epithelium | 7.62e-09 | 6 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.17e-07 | 2 |
developing epithelial placode | 4.17e-07 | 2 |
respiratory system arterial blood vessel | 4.17e-07 | 2 |
respiratory system blood vessel | 4.17e-07 | 2 |
respiratory system artery | 4.17e-07 | 2 |
head blood vessel | 4.17e-07 | 2 |
pulmonary artery | 4.17e-07 | 2 |
pulmonary vascular system | 4.17e-07 | 2 |
pharyngeal vasculature | 4.17e-07 | 2 |
truncus arteriosus | 4.17e-07 | 2 |
aortic sac | 4.17e-07 | 2 |
pharyngeal arch artery | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.32e-13 | 1 |
lymphosarcoma | 2.32e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.