FFCP PHASE1:Mm9::chr6:68860437..68860451,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2030|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:68860437..68860451,-|id=chr6:68860437..68860451,-|ontology_enrichment_celltype=CL:0000553!2.48e-36!6;CL:0000556!2.48e-36!6;CL:0000050!3.72e-24!9;CL:0000414!1.02e-19!11;CL:0002027!6.83e-19!3;CL:0002006!6.83e-19!3;CL:0002024!6.83e-19!3;CL:0000839!1.22e-16!13;CL:0002031!1.18e-14!25;CL:0000763!1.85e-13!16;CL:0000049!2.80e-11!19;CL:0000988!2.86e-11!32;CL:0002032!2.86e-11!32;CL:0000037!2.86e-11!32;CL:0000566!2.86e-11!32;CL:0000837!2.86e-11!32;CL:0002320!1.41e-07!46;CL:0000134!1.41e-07!46;CL:0000945!3.20e-07!1;CL:0000236!3.20e-07!1;CL:0000826!3.20e-07!1|ontology_enrichment_celltype_v019_2=CL:0000553,2.34e-60,6;CL:0000556,2.34e-60,6;CL:0000050,1.68e-40,9;CL:0000839,2.95e-28,13;CL:0000763,4.45e-23,16;CL:0002027,1.99e-20,3;CL:0002006,1.99e-20,3;CL:0002024,1.99e-20,3;CL:0000049,1.58e-19,19;CL:0002031,5.68e-15,25;CL:0000988,8.41e-12,32;CL:0002032,8.41e-12,32;CL:0000037,8.41e-12,32;CL:0000837,8.41e-12,32;CL:0002320,2.48e-08,46;CL:0000134,2.48e-08,46;CL:0000219,3.79e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.85e-13!16;UBERON:0001474!1.09e-09!22;UBERON:0004765!1.09e-09!22;UBERON:0001434!1.09e-09!22;UBERON:0002193!3.25e-09!48;UBERON:0002390!8.18e-08!45;UBERON:0003061!8.18e-08!45;UBERON:0002384!1.41e-07!46;UBERON:0003199!2.79e-07!1;UBERON:0001255!5.53e-07!1;UBERON:0001556!5.53e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.45e-23,16;UBERON:0001474,6.09e-17,22;UBERON:0004765,6.09e-17,22;UBERON:0001434,6.09e-17,22;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002204,8.41e-12,32;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002384,2.48e-08,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.61980213911861,4.19737126876888,1.57731082679119,4.9361196098066,1.27316895539409,0,0,0,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05045056957423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:68860437..68860451,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2030 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:68860437..68860451,- | |||
|id=chr6:68860437..68860451,- | |||
|ontology_enrichment_celltype=CL:0000553!2.48e-36!6;CL:0000556!2.48e-36!6;CL:0000050!3.72e-24!9;CL:0000414!1.02e-19!11;CL:0002027!6.83e-19!3;CL:0002006!6.83e-19!3;CL:0002024!6.83e-19!3;CL:0000839!1.22e-16!13;CL:0002031!1.18e-14!25;CL:0000763!1.85e-13!16;CL:0000049!2.80e-11!19;CL:0000988!2.86e-11!32;CL:0002032!2.86e-11!32;CL:0000037!2.86e-11!32;CL:0000566!2.86e-11!32;CL:0000837!2.86e-11!32;CL:0002320!1.41e-07!46;CL:0000134!1.41e-07!46;CL:0000945!3.20e-07!1;CL:0000236!3.20e-07!1;CL:0000826!3.20e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.34e-60,6;CL:0000556,2.34e-60,6;CL:0000050,1.68e-40,9;CL:0000839,2.95e-28,13;CL:0000763,4.45e-23,16;CL:0002027,1.99e-20,3;CL:0002006,1.99e-20,3;CL:0002024,1.99e-20,3;CL:0000049,1.58e-19,19;CL:0002031,5.68e-15,25;CL:0000988,8.41e-12,32;CL:0002032,8.41e-12,32;CL:0000037,8.41e-12,32;CL:0000837,8.41e-12,32;CL:0002320,2.48e-08,46;CL:0000134,2.48e-08,46;CL:0000219,3.79e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.85e-13!16;UBERON:0001474!1.09e-09!22;UBERON:0004765!1.09e-09!22;UBERON:0001434!1.09e-09!22;UBERON:0002193!3.25e-09!48;UBERON:0002390!8.18e-08!45;UBERON:0003061!8.18e-08!45;UBERON:0002384!1.41e-07!46;UBERON:0003199!2.79e-07!1;UBERON:0001255!5.53e-07!1;UBERON:0001556!5.53e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.45e-23,16;UBERON:0001474,6.09e-17,22;UBERON:0004765,6.09e-17,22;UBERON:0001434,6.09e-17,22;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002204,8.41e-12,32;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002384,2.48e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.61980213911861,4.19737126876888,1.57731082679119,4.9361196098066,1.27316895539409,0,0,0,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05045056957423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68860437..68860451,- | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p@chr6:68860437..68860451, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68860437..68860451, - |
Coexpression cluster: | MCL_coexpression_mm9:2030 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.34e-60 | 6 |
megakaryocyte | 2.34e-60 | 6 |
megakaryocyte-erythroid progenitor cell | 1.68e-40 | 9 |
myeloid lineage restricted progenitor cell | 2.95e-28 | 13 |
myeloid cell | 4.45e-23 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.99e-20 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.99e-20 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.99e-20 | 3 |
common myeloid progenitor | 1.58e-19 | 19 |
hematopoietic lineage restricted progenitor cell | 5.68e-15 | 25 |
hematopoietic cell | 8.41e-12 | 32 |
hematopoietic oligopotent progenitor cell | 8.41e-12 | 32 |
hematopoietic stem cell | 8.41e-12 | 32 |
hematopoietic multipotent progenitor cell | 8.41e-12 | 32 |
connective tissue cell | 2.48e-08 | 46 |
mesenchymal cell | 2.48e-08 | 46 |
motile cell | 3.79e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.45e-23 | 16 |
bone element | 6.09e-17 | 22 |
skeletal element | 6.09e-17 | 22 |
skeletal system | 6.09e-17 | 22 |
hematopoietic system | 4.78e-12 | 45 |
blood island | 4.78e-12 | 45 |
musculoskeletal system | 8.41e-12 | 32 |
hemolymphoid system | 2.55e-11 | 48 |
immune system | 2.55e-11 | 48 |
connective tissue | 2.48e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.