FFCP PHASE1:Hg19::chrX:105937075..105937091,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79589|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21153|TSSclassifier=W|UniProt=Q8TEB7|association_with_transcript=7bp_to_ENST00000324342,NM_024539,uc004emk.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_3_at_RNF128_5end|id=chrX:105937075..105937091,+|ontology_enrichment_celltype=CL:0000181!4.64e-10!12;CL:0000417!4.64e-10!12;CL:0000668!4.64e-10!12;CL:0000414!4.64e-10!12;CL:0000412!4.64e-10!12;CL:0000182!4.64e-10!12;CL:0000223!5.25e-10!59|ontology_enrichment_celltype_v019=CL:0000182;1.17e-08;12!CL:0002563;9.27e-08;4|ontology_enrichment_celltype_v019_2=CL:0000182,1.23e-08,12;CL:0002563,9.42e-08,4;CL:0000223,1.04e-07,58|ontology_enrichment_development_v019=UBERON:0004161;2.54e-20;11!UBERON:0009497;3.99e-17;13!UBERON:0003104;6.53e-09;31!UBERON:0008425;5.90e-08;1!UBERON:0006595;7.47e-08;86!UBERON:0006242;9.72e-08;1|ontology_enrichment_disease=DOID:305!4.40e-09!106;DOID:7!1.32e-08!39;DOID:3493!8.49e-08!2;DOID:0050687!4.76e-07!143|ontology_enrichment_disease_v019=DOID:1799;5.90e-08;1!DOID:10165;5.90e-08;1!DOID:1798;5.90e-08;1|ontology_enrichment_disease_v019_2=DOID:1799,6.52e-08,1;DOID:10165,6.52e-08,1;DOID:1798,6.52e-08,1|ontology_enrichment_uberon=UBERON:0004921!8.59e-17!129;UBERON:0004185!8.59e-17!129;UBERON:0001007!2.48e-16!155;UBERON:0001555!2.48e-16!155;UBERON:0007026!2.48e-16!155;UBERON:0004119!1.88e-15!169;UBERON:0000925!1.88e-15!169;UBERON:0006595!1.88e-15!169;UBERON:0009497!1.97e-14!25;UBERON:0000015!1.97e-14!25;UBERON:0002423!1.97e-14!25;UBERON:0006235!1.97e-14!25;UBERON:0004161!1.97e-14!25;UBERON:0005409!5.70e-14!35;UBERON:0008835!1.16e-13!22;UBERON:0003894!1.16e-13!22;UBERON:0009854!5.55e-13!23;UBERON:0003929!9.74e-13!54;UBERON:0005911!8.17e-12!82;UBERON:0007499!8.75e-12!25;UBERON:0009856!2.96e-11!26;UBERON:0000160!4.98e-11!27;UBERON:0000077!2.25e-09!130;UBERON:0002107!3.35e-08!19;UBERON:0006925!3.35e-08!19;UBERON:0008836!3.35e-08!19;UBERON:0002108!4.83e-08!14;UBERON:0002394!9.42e-08!4;UBERON:0003928!9.42e-08!4;UBERON:0002294!9.48e-08!7;UBERON:0001173!9.48e-08!7;UBERON:0004912!9.48e-08!7;UBERON:0001041!6.12e-07!98|ontology_enrichment_uberon_v019=UBERON:0005409;1.14e-13;22!UBERON:0000160;4.14e-13;17!UBERON:0002108;6.88e-13;4!UBERON:0002423;1.15e-08;25!UBERON:0004921;2.92e-08;33!UBERON:0002107;3.34e-08;19!UBERON:0006925;3.34e-08;19!UBERON:0000996;5.90e-08;1!UBERON:0001242;9.27e-08;4!UBERON:0001262;9.27e-08;4!UBERON:0004786;9.27e-08;4!UBERON:0004808;9.27e-08;4!UBERON:0001277;9.27e-08;4!UBERON:0007029;1.59e-07;1!UBERON:0002365;3.60e-07;31!UBERON:0002330;3.60e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.15e-13,17;UBERON:0002108,6.88e-13,4;UBERON:0005409,5.50e-12,25;UBERON:0001007,6.02e-11,145;UBERON:0001555,6.02e-11,145;UBERON:0007026,6.02e-11,145;UBERON:0004921,6.55e-11,118;UBERON:0003929,2.82e-10,54;UBERON:0004119,1.37e-09,160;UBERON:0000925,1.37e-09,160;UBERON:0006595,1.37e-09,160;UBERON:0009497,1.18e-08,25;UBERON:0000015,1.18e-08,25;UBERON:0002423,1.18e-08,25;UBERON:0006235,1.18e-08,25;UBERON:0004161,1.18e-08,25;UBERON:0001046,1.56e-08,19;UBERON:0002107,3.59e-08,19;UBERON:0006925,3.59e-08,19;UBERON:0008836,3.59e-08,19;UBERON:0000996,5.70e-08,1;UBERON:0001242,9.42e-08,4;UBERON:0001262,9.42e-08,4;UBERON:0004786,9.42e-08,4;UBERON:0004808,9.42e-08,4;UBERON:0001277,9.42e-08,4;UBERON:0000162,1.05e-07,14;UBERON:0001353,1.05e-07,14;UBERON:0000163,1.05e-07,14;UBERON:0006866,1.05e-07,14;UBERON:0000164,1.05e-07,14;UBERON:0000931,1.05e-07,14;UBERON:0007029,1.44e-07,1;UBERON:0004122,3.38e-07,15;UBERON:0008835,5.00e-07,22;UBERON:0003894,5.00e-07,22;UBERON:0002365,6.75e-07,31;UBERON:0002330,6.75e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,11.4379247845096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.21844257223031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.359473404589307,0.179021174675609,0,3.55116260292961,0,0,0,0,0,0,4.28553999981359,0,1.593108275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37279275309382,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,7.06765357169704,0,0,7.78426567629385,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0.576361668616424,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,1.16495949527454,1.3393140992228,0.988990300573997,2.02210631562555,4.72451911270794,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24440835408615,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,2.43328587836593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,1.21917924982269,0,0,0,1.45713297917742,0,0,0,0,0,0,15.9750507283445,10.272299343686,0,1.71603825227734,0,0,0,0,0,0,0,0,0,0,0,10.2247094354512,0,0,0,0,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66029741929859,0,0|short_description=p3@RNF128}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21153 | |||
|TSSclassifier=W | |||
|UniProt=Q8TEB7 | |||
|association_with_transcript=7bp_to_ENST00000324342,NM_024539,uc004emk.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_RNF128_5end | |||
|id=chrX:105937075..105937091,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.64e-10!12;CL:0000417!4.64e-10!12;CL:0000668!4.64e-10!12;CL:0000414!4.64e-10!12;CL:0000412!4.64e-10!12;CL:0000182!4.64e-10!12;CL:0000223!5.25e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.17e-08;12!CL:0002563;9.27e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.23e-08,12;CL:0002563,9.42e-08,4;CL:0000223,1.04e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.54e-20;11!UBERON:0009497;3.99e-17;13!UBERON:0003104;6.53e-09;31!UBERON:0008425;5.90e-08;1!UBERON:0006595;7.47e-08;86!UBERON:0006242;9.72e-08;1 | |||
|ontology_enrichment_disease=DOID:305!4.40e-09!106;DOID:7!1.32e-08!39;DOID:3493!8.49e-08!2;DOID:0050687!4.76e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;5.90e-08;1!DOID:10165;5.90e-08;1!DOID:1798;5.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.52e-08,1;DOID:10165,6.52e-08,1;DOID:1798,6.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!8.59e-17!129;UBERON:0004185!8.59e-17!129;UBERON:0001007!2.48e-16!155;UBERON:0001555!2.48e-16!155;UBERON:0007026!2.48e-16!155;UBERON:0004119!1.88e-15!169;UBERON:0000925!1.88e-15!169;UBERON:0006595!1.88e-15!169;UBERON:0009497!1.97e-14!25;UBERON:0000015!1.97e-14!25;UBERON:0002423!1.97e-14!25;UBERON:0006235!1.97e-14!25;UBERON:0004161!1.97e-14!25;UBERON:0005409!5.70e-14!35;UBERON:0008835!1.16e-13!22;UBERON:0003894!1.16e-13!22;UBERON:0009854!5.55e-13!23;UBERON:0003929!9.74e-13!54;UBERON:0005911!8.17e-12!82;UBERON:0007499!8.75e-12!25;UBERON:0009856!2.96e-11!26;UBERON:0000160!4.98e-11!27;UBERON:0000077!2.25e-09!130;UBERON:0002107!3.35e-08!19;UBERON:0006925!3.35e-08!19;UBERON:0008836!3.35e-08!19;UBERON:0002108!4.83e-08!14;UBERON:0002394!9.42e-08!4;UBERON:0003928!9.42e-08!4;UBERON:0002294!9.48e-08!7;UBERON:0001173!9.48e-08!7;UBERON:0004912!9.48e-08!7;UBERON:0001041!6.12e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.14e-13;22!UBERON:0000160;4.14e-13;17!UBERON:0002108;6.88e-13;4!UBERON:0002423;1.15e-08;25!UBERON:0004921;2.92e-08;33!UBERON:0002107;3.34e-08;19!UBERON:0006925;3.34e-08;19!UBERON:0000996;5.90e-08;1!UBERON:0001242;9.27e-08;4!UBERON:0001262;9.27e-08;4!UBERON:0004786;9.27e-08;4!UBERON:0004808;9.27e-08;4!UBERON:0001277;9.27e-08;4!UBERON:0007029;1.59e-07;1!UBERON:0002365;3.60e-07;31!UBERON:0002330;3.60e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.15e-13,17;UBERON:0002108,6.88e-13,4;UBERON:0005409,5.50e-12,25;UBERON:0001007,6.02e-11,145;UBERON:0001555,6.02e-11,145;UBERON:0007026,6.02e-11,145;UBERON:0004921,6.55e-11,118;UBERON:0003929,2.82e-10,54;UBERON:0004119,1.37e-09,160;UBERON:0000925,1.37e-09,160;UBERON:0006595,1.37e-09,160;UBERON:0009497,1.18e-08,25;UBERON:0000015,1.18e-08,25;UBERON:0002423,1.18e-08,25;UBERON:0006235,1.18e-08,25;UBERON:0004161,1.18e-08,25;UBERON:0001046,1.56e-08,19;UBERON:0002107,3.59e-08,19;UBERON:0006925,3.59e-08,19;UBERON:0008836,3.59e-08,19;UBERON:0000996,5.70e-08,1;UBERON:0001242,9.42e-08,4;UBERON:0001262,9.42e-08,4;UBERON:0004786,9.42e-08,4;UBERON:0004808,9.42e-08,4;UBERON:0001277,9.42e-08,4;UBERON:0000162,1.05e-07,14;UBERON:0001353,1.05e-07,14;UBERON:0000163,1.05e-07,14;UBERON:0006866,1.05e-07,14;UBERON:0000164,1.05e-07,14;UBERON:0000931,1.05e-07,14;UBERON:0007029,1.44e-07,1;UBERON:0004122,3.38e-07,15;UBERON:0008835,5.00e-07,22;UBERON:0003894,5.00e-07,22;UBERON:0002365,6.75e-07,31;UBERON:0002330,6.75e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,11.4379247845096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.21844257223031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.359473404589307,0.179021174675609,0,3.55116260292961,0,0,0,0,0,0,4.28553999981359,0,1.593108275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37279275309382,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,7.06765357169704,0,0,7.78426567629385,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0.576361668616424,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,1.16495949527454,1.3393140992228,0.988990300573997,2.02210631562555,4.72451911270794,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24440835408615,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,2.43328587836593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,1.21917924982269,0,0,0,1.45713297917742,0,0,0,0,0,0,15.9750507283445,10.272299343686,0,1.71603825227734,0,0,0,0,0,0,0,0,0,0,0,10.2247094354512,0,0,0,0,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66029741929859,0,0 | |||
|short_description=p3@RNF128 | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p3@RNF128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RNF128_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 7bp_to_ENST00000324342, NM_024539, uc004emk.2_5end |
EntrezGene: | RNF128 |
HGNC: | 21153 |
UniProt: | Q8TEB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.23e-08 | 12 |
intestinal epithelial cell | 9.42e-08 | 4 |
endodermal cell | 1.04e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.52e-08 | 1 |
endocrine pancreas cancer | 6.52e-08 | 1 |
pancreatic endocrine carcinoma | 6.52e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.