FFCP PHASE1:Mm9::chr6:5340518..5340546,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65255|HGNC=|UniProt=Q3V229|association_with_transcript=91bp_to_ENSMUST00000119225,uc009awj.1_5end|description=CAGE_peak_1_at_Asb4_5end|id=chr6:5340518..5340546,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.75e-08!18;UBERON:0000948!4.75e-08!18;UBERON:0005498!4.75e-08!18;UBERON:0004140!4.75e-08!18;UBERON:0009881!4.75e-08!18;UBERON:0004141!4.75e-08!18;UBERON:0003084!4.75e-08!18;UBERON:0007005!4.75e-08!18;UBERON:0004139!4.75e-08!18;UBERON:0004291!4.75e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.34e-11,18;UBERON:0000948,8.34e-11,18;UBERON:0005498,8.34e-11,18;UBERON:0004140,8.34e-11,18;UBERON:0009881,8.34e-11,18;UBERON:0004141,8.34e-11,18;UBERON:0003084,8.34e-11,18;UBERON:0007005,8.34e-11,18;UBERON:0004139,8.34e-11,18;UBERON:0004291,8.34e-11,18;UBERON:0000026,8.25e-10,12;UBERON:0004708,8.25e-10,12;UBERON:0002101,8.25e-10,12;UBERON:0004357,8.25e-10,12;UBERON:0004347,8.25e-10,12;UBERON:0005732,8.25e-10,12;UBERON:0005733,8.25e-10,12;UBERON:0010707,1.02e-08,13;UBERON:0004535,2.59e-08,23;UBERON:0001009,2.59e-08,23;UBERON:0002102,9.27e-07,7;UBERON:0004710,9.27e-07,7;UBERON:0005419,9.27e-07,7;UBERON:0005417,9.27e-07,7;UBERON:0005729,9.27e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,1.43266719969378,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.662605622854841,0.489963196859816,1.24599112323707,0,0,0.255374676170375,0.614426133024974,0.923204014111357,0.731901148819277,1.04182674111352,0.558365998002762,3.37657566019008,1.22238598221448,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,2.89864488701678,0.860423876981386,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,7.11289839741157,2.13125834818499,2.30615497256059,2.41156224884196,1.52865319276416,0.251333182659351,1.48316980640624,0,2.65383165584962,3.558870698843,2.20841518460394,3.39412677194655,0,0,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0.162241263067758,0.203678727700633,1.8661045591514,0,0.210441855886474,3.3831315170303,0.689706313300419,0.900310649026746,0.60281927134286,0.340182495756639,0.2562274405697,0.187403449119458,0,19.185551371023,11.7245769704048,5.63043597324636,7.89104636739269,2.50242524303038,4.179025998266,2.46938563689532,2.9855140022774,0,0,0,12.6346721246656,11.0227248191115,6.12211008967451,10.180023630164,8.46086196513836,7.71335564436891,7.67362017676346,4.02410102099429,4.55384835231961,3.62031669809657,2.46251196118643,2.75633952455909,2.77779976108131,3.73235195994786,3.62357330653004,0.210289948564127,0,0,0,9.59797127408553,7.19933682767359,3.09281907173024,1.21010114774006,0.889512175379481,1.14135375667535,0,0,0.251335208800269,0,0.19496408711912,0,0,0,2.84501851429623,2.28497025219458,1.1270773567308,1.4255592949172,0.387904974335251,0.561086559122548,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,5.33904338291501,3.34150291692445,2.47348323623339,0.405720242777006,1.20588579876208,0.50925170356284,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,7.20067364727842,1.79261474086228,1.69745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.117211686592203,5.73772308818364,10.0988370881749,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,2.55492153374884,0.534196811001766,0,0.164970122972535,0,2.6705869977048,1.51161778482376,2.26326095707078,0.295301892880773,0.614870295887855,0.258428293168221,1.09060118843252,1.06949213515416,0,0,0,7.48967132658334,5.04171063287669,2.8458910432206,4.50107773566344,4.61084607469911,2.49716344642899,2.30368628842969,1.2178597964584,0.938686832254841,0.21183207086382,0,0.98931751764888,0.807322133479528,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0.741701208042039,0.341741761595705,1.44470807574256,0.925972636848558,0,0,0,0.509935289981566,0.279902904647316,0,0,3.32152793260192,2.84647253977588,1.51207477150522,0.627264888043406,0.87345025498471,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0,0,5.23307911153926,3.97100377097034,0.777804753376191,1.6790777052105,1.520605129417,0.704143431874524,0.13020438484395,0.104859344425711,0,2.01621004380506,0,1.21635129174099,0.205421914329655,0.909445760844565,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0.116876902181569,6.57518112484113,0,0,0,0.965947970160952,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,10.6900968011702,7.98049746802062,4.78054096111576,2.43106717068294,6.07878171621149,0.735374033800057,2.889207461421,2.06035057238894,1.92551525755089,3.03236654116557,3.54871019846336,2.074889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| ||
|EntrezGene=65255 | |||
|HGNC= | |||
|UniProt=Q3V229 | |||
|association_with_transcript=91bp_to_ENSMUST00000119225,uc009awj.1_5end | |||
|description=CAGE_peak_1_at_Asb4_5end | |||
|id=chr6:5340518..5340546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.75e-08!18;UBERON:0000948!4.75e-08!18;UBERON:0005498!4.75e-08!18;UBERON:0004140!4.75e-08!18;UBERON:0009881!4.75e-08!18;UBERON:0004141!4.75e-08!18;UBERON:0003084!4.75e-08!18;UBERON:0007005!4.75e-08!18;UBERON:0004139!4.75e-08!18;UBERON:0004291!4.75e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.34e-11,18;UBERON:0000948,8.34e-11,18;UBERON:0005498,8.34e-11,18;UBERON:0004140,8.34e-11,18;UBERON:0009881,8.34e-11,18;UBERON:0004141,8.34e-11,18;UBERON:0003084,8.34e-11,18;UBERON:0007005,8.34e-11,18;UBERON:0004139,8.34e-11,18;UBERON:0004291,8.34e-11,18;UBERON:0000026,8.25e-10,12;UBERON:0004708,8.25e-10,12;UBERON:0002101,8.25e-10,12;UBERON:0004357,8.25e-10,12;UBERON:0004347,8.25e-10,12;UBERON:0005732,8.25e-10,12;UBERON:0005733,8.25e-10,12;UBERON:0010707,1.02e-08,13;UBERON:0004535,2.59e-08,23;UBERON:0001009,2.59e-08,23;UBERON:0002102,9.27e-07,7;UBERON:0004710,9.27e-07,7;UBERON:0005419,9.27e-07,7;UBERON:0005417,9.27e-07,7;UBERON:0005729,9.27e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,1.43266719969378,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.662605622854841,0.489963196859816,1.24599112323707,0,0,0.255374676170375,0.614426133024974,0.923204014111357,0.731901148819277,1.04182674111352,0.558365998002762,3.37657566019008,1.22238598221448,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,2.89864488701678,0.860423876981386,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,7.11289839741157,2.13125834818499,2.30615497256059,2.41156224884196,1.52865319276416,0.251333182659351,1.48316980640624,0,2.65383165584962,3.558870698843,2.20841518460394,3.39412677194655,0,0,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0.162241263067758,0.203678727700633,1.8661045591514,0,0.210441855886474,3.3831315170303,0.689706313300419,0.900310649026746,0.60281927134286,0.340182495756639,0.2562274405697,0.187403449119458,0,19.185551371023,11.7245769704048,5.63043597324636,7.89104636739269,2.50242524303038,4.179025998266,2.46938563689532,2.9855140022774,0,0,0,12.6346721246656,11.0227248191115,6.12211008967451,10.180023630164,8.46086196513836,7.71335564436891,7.67362017676346,4.02410102099429,4.55384835231961,3.62031669809657,2.46251196118643,2.75633952455909,2.77779976108131,3.73235195994786,3.62357330653004,0.210289948564127,0,0,0,9.59797127408553,7.19933682767359,3.09281907173024,1.21010114774006,0.889512175379481,1.14135375667535,0,0,0.251335208800269,0,0.19496408711912,0,0,0,2.84501851429623,2.28497025219458,1.1270773567308,1.4255592949172,0.387904974335251,0.561086559122548,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,5.33904338291501,3.34150291692445,2.47348323623339,0.405720242777006,1.20588579876208,0.50925170356284,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,7.20067364727842,1.79261474086228,1.69745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.117211686592203,5.73772308818364,10.0988370881749,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,2.55492153374884,0.534196811001766,0,0.164970122972535,0,2.6705869977048,1.51161778482376,2.26326095707078,0.295301892880773,0.614870295887855,0.258428293168221,1.09060118843252,1.06949213515416,0,0,0,7.48967132658334,5.04171063287669,2.8458910432206,4.50107773566344,4.61084607469911,2.49716344642899,2.30368628842969,1.2178597964584,0.938686832254841,0.21183207086382,0,0.98931751764888,0.807322133479528,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0.741701208042039,0.341741761595705,1.44470807574256,0.925972636848558,0,0,0,0.509935289981566,0.279902904647316,0,0,3.32152793260192,2.84647253977588,1.51207477150522,0.627264888043406,0.87345025498471,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0,0,5.23307911153926,3.97100377097034,0.777804753376191,1.6790777052105,1.520605129417,0.704143431874524,0.13020438484395,0.104859344425711,0,2.01621004380506,0,1.21635129174099,0.205421914329655,0.909445760844565,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0.116876902181569,6.57518112484113,0,0,0,0.965947970160952,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,10.6900968011702,7.98049746802062,4.78054096111576,2.43106717068294,6.07878171621149,0.735374033800057,2.889207461421,2.06035057238894,1.92551525755089,3.03236654116557,3.54871019846336,2.07488975524684,1.591905626988,2.30490548657529,2.41228969613576,2.38146845641537,1.39061191133827,1.54327376370964,2.47251540481984,2.35518272215036,2.40008476669791,1.4198064492747,2.62279808942053,1.59881058295561,1.31753132581463,1.60767754994185,1.82927972872773,2.10455769150274,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,1.22769312950907,2.63392630016142,2.3148793317737,1.49886346762768,2.10538447600868,1.50409737833809,2.67803664896381,1.54413993383661,3.94175320554716 | |||
|short_description=p1@Asb4 | |||
}} |
Revision as of 10:18, 14 September 2013
Short description: | p1@Asb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Asb4_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENSMUST00000119225, uc009awj.1_5end |
EntrezGene: | Asb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.34e-11 | 18 |
heart | 8.34e-11 | 18 |
primitive heart tube | 8.34e-11 | 18 |
primary heart field | 8.34e-11 | 18 |
anterior lateral plate mesoderm | 8.34e-11 | 18 |
heart tube | 8.34e-11 | 18 |
heart primordium | 8.34e-11 | 18 |
cardiac mesoderm | 8.34e-11 | 18 |
cardiogenic plate | 8.34e-11 | 18 |
heart rudiment | 8.34e-11 | 18 |
appendage | 8.25e-10 | 12 |
paired limb/fin | 8.25e-10 | 12 |
limb | 8.25e-10 | 12 |
paired limb/fin bud | 8.25e-10 | 12 |
limb bud | 8.25e-10 | 12 |
limb/fin field | 8.25e-10 | 12 |
limb field | 8.25e-10 | 12 |
appendage girdle complex | 1.02e-08 | 13 |
cardiovascular system | 2.59e-08 | 23 |
circulatory system | 2.59e-08 | 23 |
forelimb | 9.27e-07 | 7 |
pectoral appendage | 9.27e-07 | 7 |
pectoral appendage bud | 9.27e-07 | 7 |
forelimb bud | 9.27e-07 | 7 |
forelimb/pectoral fin field | 9.27e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.