FFCP PHASE1:Mm9::chr6:48857796..48857805,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76507|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=442bp_to_ENSMUST00000161184_5end|description=CAGE_peak_8_at_Abp1_5end|id=chr6:48857796..48857805,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!2.69e-15!9;UBERON:0000160!5.77e-15!43;UBERON:0004923!1.00e-14!24;UBERON:0003975!1.22e-14!5;UBERON:0000344!1.53e-13!15;UBERON:0003134!8.85e-13!8;UBERON:0003100!2.52e-12!11;UBERON:0005795!3.05e-12!4;UBERON:0000995!3.05e-12!4;UBERON:0005409!3.35e-11!59;UBERON:0005631!7.57e-10!3;UBERON:0000478!7.57e-10!3;UBERON:0000158!7.57e-10!3;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000331!3.16e-09!3;UBERON:0002116!3.16e-09!3;UBERON:0001204!3.16e-09!3;UBERON:0001168!3.16e-09!3;UBERON:0004119!4.00e-08!130;UBERON:0000925!4.00e-08!130;UBERON:0006595!4.00e-08!130;UBERON:0007023!4.02e-08!51;UBERON:0004175!5.67e-08!9;UBERON:0001987!2.46e-07!2;UBERON:0003124!2.46e-07!2;UBERON:0004340!2.46e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0005795,4.62e-40,4;UBERON:0000995,4.62e-40,4;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0003975,2.89e-32,5;UBERON:0005631,2.28e-24,3;UBERON:0000478,2.28e-24,3;UBERON:0000158,2.28e-24,3;UBERON:0003134,1.53e-20,8;UBERON:0006834,7.74e-19,1;UBERON:0004175,2.30e-18,9;UBERON:0000474,2.30e-18,9;UBERON:0003100,3.43e-15,11;UBERON:0003133,2.18e-07,24;UBERON:0004923,2.41e-07,24;UBERON:0000331,4.77e-07,3;UBERON:0002116,4.77e-07,3;UBERON:0001204,4.77e-07,3;UBERON:0001168,4.77e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,0,0,0.861884930743556,2.85035129184561,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,1.42358718463353,0.494096864172033,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5686352160275,4.2366414172764,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69498149349846,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@Abp1}} | ||
|EntrezGene=76507 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt= | |||
|association_with_transcript=442bp_to_ENSMUST00000161184_5end | |||
|description=CAGE_peak_8_at_Abp1_5end | |||
|id=chr6:48857796..48857805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!2.69e-15!9;UBERON:0000160!5.77e-15!43;UBERON:0004923!1.00e-14!24;UBERON:0003975!1.22e-14!5;UBERON:0000344!1.53e-13!15;UBERON:0003134!8.85e-13!8;UBERON:0003100!2.52e-12!11;UBERON:0005795!3.05e-12!4;UBERON:0000995!3.05e-12!4;UBERON:0005409!3.35e-11!59;UBERON:0005631!7.57e-10!3;UBERON:0000478!7.57e-10!3;UBERON:0000158!7.57e-10!3;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000331!3.16e-09!3;UBERON:0002116!3.16e-09!3;UBERON:0001204!3.16e-09!3;UBERON:0001168!3.16e-09!3;UBERON:0004119!4.00e-08!130;UBERON:0000925!4.00e-08!130;UBERON:0006595!4.00e-08!130;UBERON:0007023!4.02e-08!51;UBERON:0004175!5.67e-08!9;UBERON:0001987!2.46e-07!2;UBERON:0003124!2.46e-07!2;UBERON:0004340!2.46e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,4.62e-40,4;UBERON:0000995,4.62e-40,4;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0003975,2.89e-32,5;UBERON:0005631,2.28e-24,3;UBERON:0000478,2.28e-24,3;UBERON:0000158,2.28e-24,3;UBERON:0003134,1.53e-20,8;UBERON:0006834,7.74e-19,1;UBERON:0004175,2.30e-18,9;UBERON:0000474,2.30e-18,9;UBERON:0003100,3.43e-15,11;UBERON:0003133,2.18e-07,24;UBERON:0004923,2.41e-07,24;UBERON:0000331,4.77e-07,3;UBERON:0002116,4.77e-07,3;UBERON:0001204,4.77e-07,3;UBERON:0001168,4.77e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,0,0,0.861884930743556,2.85035129184561,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,1.42358718463353,0.494096864172033,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5686352160275,4.2366414172764,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69498149349846,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Abp1 | |||
}} |
Revision as of 10:11, 14 September 2013
Short description: | p8@Abp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Abp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 442bp_to_ENSMUST00000161184_5end |
EntrezGene: | Abp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 4.62e-40 | 4 |
uterus | 4.62e-40 | 4 |
placenta | 6.35e-36 | 2 |
chorion | 6.35e-36 | 2 |
allantois | 6.35e-36 | 2 |
internal female genitalia | 2.89e-32 | 5 |
extraembryonic membrane | 2.28e-24 | 3 |
extraembryonic structure | 2.28e-24 | 3 |
membranous layer | 2.28e-24 | 3 |
female reproductive organ | 1.53e-20 | 8 |
uterus or analog | 7.74e-19 | 1 |
internal genitalia | 2.30e-18 | 9 |
female reproductive system | 2.30e-18 | 9 |
female organism | 3.43e-15 | 11 |
reproductive organ | 2.18e-07 | 24 |
organ component layer | 2.41e-07 | 24 |
ileal mucosa | 4.77e-07 | 3 |
ileum | 4.77e-07 | 3 |
mucosa of small intestine | 4.77e-07 | 3 |
wall of small intestine | 4.77e-07 | 3 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.