FFCP PHASE1:Hg19::chr9:21994750..21994776,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1029|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1787|TSSclassifier=S|UniProt=Q8N726|association_with_transcript=-260bp_to_ENST00000361570,ENST00000530628,NM_058195,uc003zpl.2_5end|coexpression_cluster_id=C193|description=CAGE_peak_13_at_CDKN2A_5end|id=chr9:21994750..21994776,-|ontology_enrichment_celltype=CL:0000003!4.68e-11!722;CL:0000548!6.90e-10!679;CL:0000004!6.90e-10!679;CL:0000255!6.90e-10!679;CL:0000012!7.22e-10!682;CL:0002371!8.38e-08!591|ontology_enrichment_celltype_v019=CL:1000746;2.30e-08;7!CL:1000612;2.30e-08;7!CL:0000622;2.61e-07;5!CL:0002623;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:1000746,3.94e-08,7;CL:1000612,3.94e-08,7;CL:0000622,2.58e-07,5;CL:0002623,2.76e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000074;2.30e-08;7!UBERON:0001229;2.30e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.94e-08,7;UBERON:0000074,3.94e-08,7;UBERON:0001229,3.94e-08,7;UBERON:0001230,3.94e-08,7;UBERON:0003220,3.94e-08,7;UBERON:0005749,3.94e-08,7;UBERON:0004199,3.94e-08,7;UBERON:0004209,3.94e-08,7;UBERON:0004198,3.94e-08,7;UBERON:0005103,4.64e-07,8;UBERON:0000083,4.64e-07,8;UBERON:0009201,4.64e-07,8;UBERON:0006553,4.64e-07,8;UBERON:0003074,4.64e-07,8;UBERON:0003060,4.64e-07,8|phase1_expression=0.181678379270557,1.07050261945492,1.69145284915165,2.00146596706261,0.446961094427288,0.872338524100369,0,0.631719873426831,1.04474251279935,0,0,0,1.05506791291381,0.990130823680373,0.331397375727916,0,0,0.730310090387373,0,0,0.612002073732759,0.313454721478088,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.309868802321207,0.426507697462265,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,1.00311897234407,0,0,0,0.334231370655521,0,0.221533894583621,0,1.40900451698243,1.30059347559878,1.97325485524411,1.93445012450094,1.15921234294021,0,0,0,0.793165398882963,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0.527008714158756,0,1.45718115317017,1.11235332835329,0.324547393654683,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,2.43042584364528,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.886413581652058,0.264818361626438,0,0.354668382198357,1.12135520028461,0,0.98667019366864,0,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,1.04614076386261,0.117434498643765,0,0,0.816616685019573,0.122834317311768,2.16984140469107,0,0.247266929278557,0,1.43723628363248,0,0,0.554128230968366,1.31693286264251,0,0.150238058906597,0.226864366320042,0.179389635688862,1.06778694409284,0.423863802319124,0.300091096084402,0.824420233907511,0,0.558350568994769,0,0.194874010322397,0,1.93304787148829,0.80823028409406,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,0.721879481669586,0,0.674338760312407,0,0.220587945464788,0.871517776369625,0,0,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.491953754172454,0.514703430895577,0.439001141634502,0,0.100528972411631,0.370353780634118,0.977424915930974,2.07986957055916,1.44331342025273,0.115930404975077,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.283550194484773,0.716468181622786,0,0,0.985326475791887,0.264145302039678,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0,0,0,1.55126058909333,21.4593867511129,0.845302752556,1.06375246633948,1.04007436911366,0.771622122786426,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0.602878754119172,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.358121926479791,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0.415941723061614,1.07057393278297,0.788512075169673,0.702848489956279,1.80567659836631,4.5481500811197,3.10419213877515,0,1.10621501125022,0.695068915744663,0,0,0,0,0,0.303127571446259,0,0.604780586659361,1.24053903909388,0.460385919864187,0,0.768834895534206,0.511707249066704,1.60853921143608,4.45254199334973,0.308419387605311,0.177561725313127,0.164254312027618,0,0.116210378459959,0.241718899183244,0.200506470303285,0.276242966807689,0,0.364182336013434,0.262248829918848,0,0,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |||
|TSSclassifier=S | |||
|UniProt=Q8N726 | |||
|association_with_transcript=-260bp_to_ENST00000361570,ENST00000530628,NM_058195,uc003zpl.2_5end | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_13_at_CDKN2A_5end | |||
|id=chr9:21994750..21994776,- | |||
|ontology_enrichment_celltype=CL:0000003!4.68e-11!722;CL:0000548!6.90e-10!679;CL:0000004!6.90e-10!679;CL:0000255!6.90e-10!679;CL:0000012!7.22e-10!682;CL:0002371!8.38e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:1000746;2.30e-08;7!CL:1000612;2.30e-08;7!CL:0000622;2.61e-07;5!CL:0002623;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.94e-08,7;CL:1000612,3.94e-08,7;CL:0000622,2.58e-07,5;CL:0002623,2.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.30e-08;7!UBERON:0001229;2.30e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.94e-08,7;UBERON:0000074,3.94e-08,7;UBERON:0001229,3.94e-08,7;UBERON:0001230,3.94e-08,7;UBERON:0003220,3.94e-08,7;UBERON:0005749,3.94e-08,7;UBERON:0004199,3.94e-08,7;UBERON:0004209,3.94e-08,7;UBERON:0004198,3.94e-08,7;UBERON:0005103,4.64e-07,8;UBERON:0000083,4.64e-07,8;UBERON:0009201,4.64e-07,8;UBERON:0006553,4.64e-07,8;UBERON:0003074,4.64e-07,8;UBERON:0003060,4.64e-07,8 | |||
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| |||
|short_description=p13@CDKN2A | |||
}} |
Revision as of 08:37, 14 September 2013
Short description: | p13@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_CDKN2A_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -260bp_to_ENST00000361570, ENST00000530628, NM_058195, uc003zpl.2_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | Q8N726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.94e-08 | 7 |
kidney corpuscule cell | 3.94e-08 | 7 |
acinar cell | 2.58e-07 | 5 |
acinar cell of salivary gland | 2.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 3.94e-08 | 7 |
renal glomerulus | 3.94e-08 | 7 |
renal corpuscle | 3.94e-08 | 7 |
glomerular capsule | 3.94e-08 | 7 |
metanephric mesenchyme | 3.94e-08 | 7 |
glomerular tuft | 3.94e-08 | 7 |
S-shaped body | 3.94e-08 | 7 |
renal vesicle | 3.94e-08 | 7 |
comma-shaped body | 3.94e-08 | 7 |
mesonephric epithelium | 4.64e-07 | 8 |
mesonephric tubule | 4.64e-07 | 8 |
nephric duct | 4.64e-07 | 8 |
renal duct | 4.64e-07 | 8 |
mesonephric duct | 4.64e-07 | 8 |
pronephric duct | 4.64e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.