FFCP PHASE1:Mm9::chr5:89457023..89457037,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54403|HGNC=|MCL_coexpression_id=11|UniProt=O88343|association_with_transcript=32bp_to_ENSMUST00000130041_5end|description=CAGE_peak_3_at_Slc4a4_5end|id=chr5:89457023..89457037,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!9.36e-22!14;UBERON:0003918!9.36e-22!14;UBERON:0005095!9.36e-22!14;UBERON:0007687!9.36e-22!14;UBERON:0006554!7.43e-19!16;UBERON:0001008!1.16e-17!17;UBERON:0000489!5.11e-14!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.76e-36,14;UBERON:0003918,2.76e-36,14;UBERON:0011143,2.76e-36,14;UBERON:0005095,2.76e-36,14;UBERON:0007687,2.76e-36,14;UBERON:0006554,3.71e-28,18;UBERON:0001008,1.17e-26,19;UBERON:0000489,4.37e-24,21;UBERON:0003103,1.56e-11,43;UBERON:0005172,4.70e-10,49;UBERON:0005173,4.70e-10,49;UBERON:0002417,4.70e-10,49;UBERON:0000916,4.70e-10,49;UBERON:0003104,5.82e-08,61;UBERON:0009142,5.82e-08,61;UBERON:0009569,2.60e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,1.1270773567308,2.24016460629846,4.84881217919064,7.50453272826409,17.5797573205435,30.1124701878388,40.8196692387574,47.014319454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p3@Slc4a4}} | ||
|EntrezGene=54403 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=O88343 | |||
|association_with_transcript=32bp_to_ENSMUST00000130041_5end | |||
|description=CAGE_peak_3_at_Slc4a4_5end | |||
|id=chr5:89457023..89457037,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!9.36e-22!14;UBERON:0003918!9.36e-22!14;UBERON:0005095!9.36e-22!14;UBERON:0007687!9.36e-22!14;UBERON:0006554!7.43e-19!16;UBERON:0001008!1.16e-17!17;UBERON:0000489!5.11e-14!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.76e-36,14;UBERON:0003918,2.76e-36,14;UBERON:0011143,2.76e-36,14;UBERON:0005095,2.76e-36,14;UBERON:0007687,2.76e-36,14;UBERON:0006554,3.71e-28,18;UBERON:0001008,1.17e-26,19;UBERON:0000489,4.37e-24,21;UBERON:0003103,1.56e-11,43;UBERON:0005172,4.70e-10,49;UBERON:0005173,4.70e-10,49;UBERON:0002417,4.70e-10,49;UBERON:0000916,4.70e-10,49;UBERON:0003104,5.82e-08,61;UBERON:0009142,5.82e-08,61;UBERON:0009569,2.60e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,1.1270773567308,2.24016460629846,4.84881217919064,7.50453272826409,17.5797573205435,30.1124701878388,40.8196692387574,47.014319454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Slc4a4 | |||
}} |
Revision as of 08:13, 14 September 2013
Short description: | p3@Slc4a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc4a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 32bp_to_ENSMUST00000130041_5end |
EntrezGene: | Slc4a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.76e-36 | 14 |
kidney mesenchyme | 2.76e-36 | 14 |
upper urinary tract | 2.76e-36 | 14 |
kidney rudiment | 2.76e-36 | 14 |
kidney field | 2.76e-36 | 14 |
urinary system structure | 3.71e-28 | 18 |
renal system | 1.17e-26 | 19 |
cavitated compound organ | 4.37e-24 | 21 |
compound organ | 1.56e-11 | 43 |
abdomen element | 4.70e-10 | 49 |
abdominal segment element | 4.70e-10 | 49 |
abdominal segment of trunk | 4.70e-10 | 49 |
abdomen | 4.70e-10 | 49 |
mesenchyme | 5.82e-08 | 61 |
entire embryonic mesenchyme | 5.82e-08 | 61 |
subdivision of trunk | 2.60e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.