FFCP PHASE1:Mm9::chr5:147284234..147284251,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:147284234..147284251,+|id=chr5:147284234..147284251,+|ontology_enrichment_celltype=CL:0000117!6.45e-19!23;CL:0000337!6.45e-19!23;CL:0000540!8.57e-15!33;CL:0000047!8.57e-15!33;CL:0000031!8.57e-15!33;CL:0000404!8.57e-15!33;CL:0000221!6.25e-12!44;CL:0000133!6.25e-12!44;CL:0002319!2.86e-11!43;CL:0000393!2.91e-11!39;CL:0000211!2.91e-11!39;CL:0000055!1.49e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-17,23;CL:0000337,2.11e-17,23;CL:0002610,3.53e-17,3;CL:0002614,5.04e-16,3;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39;CL:0002319,8.84e-09,43;CL:0000221,1.49e-08,44;CL:0000133,1.49e-08,44;CL:0002612,6.89e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.42e-35!71;UBERON:0003075!2.42e-35!71;UBERON:0007284!2.42e-35!71;UBERON:0004121!3.04e-30!102;UBERON:0000924!3.04e-30!102;UBERON:0006601!3.04e-30!102;UBERON:0000033!7.38e-29!63;UBERON:0001049!1.07e-27!52;UBERON:0005068!1.07e-27!52;UBERON:0006241!1.07e-27!52;UBERON:0007135!1.07e-27!52;UBERON:0001017!3.73e-27!73;UBERON:0005743!3.73e-27!73;UBERON:0003056!4.75e-26!49;UBERON:0000073!5.66e-26!75;UBERON:0001016!5.66e-26!75;UBERON:0002020!6.62e-26!34;UBERON:0002616!2.79e-25!49;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0002791!1.02e-20!29;UBERON:0003528!1.02e-20!29;UBERON:0001893!1.02e-20!29;UBERON:0003080!1.50e-20!40;UBERON:0002780!7.42e-20!39;UBERON:0001890!7.42e-20!39;UBERON:0006240!7.42e-20!39;UBERON:0007811!6.88e-17!86;UBERON:0000153!5.35e-15!94;UBERON:0000956!5.89e-15!21;UBERON:0001869!5.89e-15!21;UBERON:0000203!5.89e-15!21;UBERON:0002021!5.90e-12!10;UBERON:0000411!5.90e-12!10;UBERON:0001950!5.90e-12!10;UBERON:0002619!2.30e-11!17;UBERON:0000025!4.02e-08!114;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0004111!2.41e-07!122;UBERON:0002240!4.03e-07!6;UBERON:0005174!4.03e-07!6;UBERON:0001137!4.03e-07!6;UBERON:0002420!6.27e-07!8;UBERON:0007245!6.27e-07!8;UBERON:0010009!6.27e-07!8;UBERON:0010011!6.27e-07!8;UBERON:0000454!6.27e-07!8;UBERON:0002298!7.63e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.35e-25,10;UBERON:0000411,3.35e-25,10;UBERON:0001950,3.35e-25,10;UBERON:0002020,4.30e-24,34;UBERON:0000073,5.86e-23,54;UBERON:0004684,3.53e-17,3;UBERON:0002275,3.53e-17,3;UBERON:0003528,9.76e-17,29;UBERON:0002791,9.76e-17,29;UBERON:0001893,9.76e-17,29;UBERON:0001017,1.85e-16,73;UBERON:0002038,5.04e-16,3;UBERON:0009663,5.04e-16,3;UBERON:0009661,5.04e-16,3;UBERON:0000125,5.04e-16,3;UBERON:0002308,5.04e-16,3;UBERON:0001016,5.75e-16,75;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0002619,1.40e-14,17;UBERON:0002950,3.63e-12,4;UBERON:0001891,3.63e-12,4;UBERON:0009616,3.63e-12,4;UBERON:0010286,3.63e-12,4;UBERON:0004121,3.67e-12,95;UBERON:0000924,3.67e-12,95;UBERON:0006601,3.67e-12,95;UBERON:0002780,4.16e-12,39;UBERON:0001890,4.16e-12,39;UBERON:0006240,4.16e-12,39;UBERON:0002346,5.80e-12,64;UBERON:0003075,5.80e-12,64;UBERON:0007284,5.80e-12,64;UBERON:0003080,9.03e-12,40;UBERON:0000956,1.12e-11,21;UBERON:0001869,1.12e-11,21;UBERON:0000203,1.12e-11,21;UBERON:0010371,2.94e-10,73;UBERON:0002616,4.65e-10,46;UBERON:0000955,8.15e-10,47;UBERON:0006238,8.15e-10,47;UBERON:0001948,8.22e-10,5;UBERON:0002315,8.22e-10,5;UBERON:0003056,2.33e-09,49;UBERON:0002240,2.92e-08,6;UBERON:0005174,2.92e-08,6;UBERON:0001137,2.92e-08,6;UBERON:0002257,6.89e-08,3;UBERON:0010314,9.60e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.933206510776299,0.945041568321835,0.420649922702764,1.14260393761521,0.883474163806454,0.367472397644862,0.383381884072945,0,3.30347642998166,3.95830748064082,3.84016333140609,0.659431438650969,0.457438218012048,0.52091337055676,1.3959149950069,1.12552522006336,3.66715794664344,2.94628585473668,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0.521472960576829,1.02286182932132,0.62336413367868,0.811206315338788,0,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0,0.452114453507145,0.204109497453984,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.723245292907558,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:147284234..147284251,+ | |||
|id=chr5:147284234..147284251,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.45e-19!23;CL:0000337!6.45e-19!23;CL:0000540!8.57e-15!33;CL:0000047!8.57e-15!33;CL:0000031!8.57e-15!33;CL:0000404!8.57e-15!33;CL:0000221!6.25e-12!44;CL:0000133!6.25e-12!44;CL:0002319!2.86e-11!43;CL:0000393!2.91e-11!39;CL:0000211!2.91e-11!39;CL:0000055!1.49e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-17,23;CL:0000337,2.11e-17,23;CL:0002610,3.53e-17,3;CL:0002614,5.04e-16,3;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39;CL:0002319,8.84e-09,43;CL:0000221,1.49e-08,44;CL:0000133,1.49e-08,44;CL:0002612,6.89e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.42e-35!71;UBERON:0003075!2.42e-35!71;UBERON:0007284!2.42e-35!71;UBERON:0004121!3.04e-30!102;UBERON:0000924!3.04e-30!102;UBERON:0006601!3.04e-30!102;UBERON:0000033!7.38e-29!63;UBERON:0001049!1.07e-27!52;UBERON:0005068!1.07e-27!52;UBERON:0006241!1.07e-27!52;UBERON:0007135!1.07e-27!52;UBERON:0001017!3.73e-27!73;UBERON:0005743!3.73e-27!73;UBERON:0003056!4.75e-26!49;UBERON:0000073!5.66e-26!75;UBERON:0001016!5.66e-26!75;UBERON:0002020!6.62e-26!34;UBERON:0002616!2.79e-25!49;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0002791!1.02e-20!29;UBERON:0003528!1.02e-20!29;UBERON:0001893!1.02e-20!29;UBERON:0003080!1.50e-20!40;UBERON:0002780!7.42e-20!39;UBERON:0001890!7.42e-20!39;UBERON:0006240!7.42e-20!39;UBERON:0007811!6.88e-17!86;UBERON:0000153!5.35e-15!94;UBERON:0000956!5.89e-15!21;UBERON:0001869!5.89e-15!21;UBERON:0000203!5.89e-15!21;UBERON:0002021!5.90e-12!10;UBERON:0000411!5.90e-12!10;UBERON:0001950!5.90e-12!10;UBERON:0002619!2.30e-11!17;UBERON:0000025!4.02e-08!114;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0004111!2.41e-07!122;UBERON:0002240!4.03e-07!6;UBERON:0005174!4.03e-07!6;UBERON:0001137!4.03e-07!6;UBERON:0002420!6.27e-07!8;UBERON:0007245!6.27e-07!8;UBERON:0010009!6.27e-07!8;UBERON:0010011!6.27e-07!8;UBERON:0000454!6.27e-07!8;UBERON:0002298!7.63e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.35e-25,10;UBERON:0000411,3.35e-25,10;UBERON:0001950,3.35e-25,10;UBERON:0002020,4.30e-24,34;UBERON:0000073,5.86e-23,54;UBERON:0004684,3.53e-17,3;UBERON:0002275,3.53e-17,3;UBERON:0003528,9.76e-17,29;UBERON:0002791,9.76e-17,29;UBERON:0001893,9.76e-17,29;UBERON:0001017,1.85e-16,73;UBERON:0002038,5.04e-16,3;UBERON:0009663,5.04e-16,3;UBERON:0009661,5.04e-16,3;UBERON:0000125,5.04e-16,3;UBERON:0002308,5.04e-16,3;UBERON:0001016,5.75e-16,75;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0002619,1.40e-14,17;UBERON:0002950,3.63e-12,4;UBERON:0001891,3.63e-12,4;UBERON:0009616,3.63e-12,4;UBERON:0010286,3.63e-12,4;UBERON:0004121,3.67e-12,95;UBERON:0000924,3.67e-12,95;UBERON:0006601,3.67e-12,95;UBERON:0002780,4.16e-12,39;UBERON:0001890,4.16e-12,39;UBERON:0006240,4.16e-12,39;UBERON:0002346,5.80e-12,64;UBERON:0003075,5.80e-12,64;UBERON:0007284,5.80e-12,64;UBERON:0003080,9.03e-12,40;UBERON:0000956,1.12e-11,21;UBERON:0001869,1.12e-11,21;UBERON:0000203,1.12e-11,21;UBERON:0010371,2.94e-10,73;UBERON:0002616,4.65e-10,46;UBERON:0000955,8.15e-10,47;UBERON:0006238,8.15e-10,47;UBERON:0001948,8.22e-10,5;UBERON:0002315,8.22e-10,5;UBERON:0003056,2.33e-09,49;UBERON:0002240,2.92e-08,6;UBERON:0005174,2.92e-08,6;UBERON:0001137,2.92e-08,6;UBERON:0002257,6.89e-08,3;UBERON:0010314,9.60e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.933206510776299,0.945041568321835,0.420649922702764,1.14260393761521,0.883474163806454,0.367472397644862,0.383381884072945,0,3.30347642998166,3.95830748064082,3.84016333140609,0.659431438650969,0.457438218012048,0.52091337055676,1.3959149950069,1.12552522006336,3.66715794664344,2.94628585473668,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0.521472960576829,1.02286182932132,0.62336413367868,0.811206315338788,0,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0,0.452114453507145,0.204109497453984,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.723245292907558,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0,0.445597348164788,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0,0,3.3885110557024,3.22227665555024,0.572895513439397,0.68741272937475,1.37016503954128,5.2877572817279,2.02506750069542,0.45032120322422,1.81256963593682,1.55328093525546,0.207574695168353,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0.818462086339379,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:147284234..147284251,+ | |||
}} |
Revision as of 07:02, 14 September 2013
Short description: | p@chr5:147284234..147284251, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:147284234..147284251, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.11e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-17 | 23 |
raphe nuclei neuron | 3.53e-17 | 3 |
neuron of the substantia nigra | 5.04e-16 | 3 |
neuron | 8.61e-12 | 33 |
neuronal stem cell | 8.61e-12 | 33 |
neuroblast | 8.61e-12 | 33 |
electrically signaling cell | 8.61e-12 | 33 |
electrically responsive cell | 8.43e-10 | 39 |
electrically active cell | 8.43e-10 | 39 |
neural cell | 8.84e-09 | 43 |
ectodermal cell | 1.49e-08 | 44 |
neurectodermal cell | 1.49e-08 | 44 |
neuron of the ventral spinal cord | 6.89e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.