FFCP PHASE1:Hg19::chr9:106503385..106503391,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C429|description=CAGE_peak_at_chr9:106503385..106503391,-|id=chr9:106503385..106503391,-|ontology_enrichment_celltype=CL:0000054!1.52e-12!2;CL:0000137!1.52e-12!2;CL:0000092!1.52e-12!2;CL:0002573!2.96e-08!2;CL:0000243!4.95e-08!15;CL:0000125!4.95e-08!15;CL:0000030!4.95e-08!15;CL:0000339!4.95e-08!15;CL:0000095!3.67e-07!17;CL:0000123!3.67e-07!17;CL:0002127!9.73e-07!1;CL:0000914!9.73e-07!1;CL:0000911!9.73e-07!1;CL:0000814!9.73e-07!1;CL:0002042!9.73e-07!1;CL:0002039!9.73e-07!1;CL:0002040!9.73e-07!1;CL:0002041!9.73e-07!1|ontology_enrichment_celltype_v019=CL:1000415;1.75e-12;2|ontology_enrichment_celltype_v019_2=CL:1000415,1.85e-12,2|ontology_enrichment_development_v019=UBERON:0007123;1.08e-18;5|ontology_enrichment_disease=DOID:1909!8.49e-13!2;DOID:200!1.52e-12!2;DOID:4305!1.52e-12!2;DOID:14566!5.04e-12!239;DOID:162!3.44e-10!235;DOID:201!4.15e-09!6;DOID:0060100!4.15e-09!6;DOID:2355!3.40e-07!1;DOID:0060085!4.06e-07!1;DOID:3165!4.06e-07!1;DOID:0060121!4.06e-07!1;DOID:2438!4.06e-07!1;DOID:4418!4.06e-07!1|ontology_enrichment_disease_v019=DOID:1115;1.57e-10;20|ontology_enrichment_disease_v019_2=DOID:1115,1.45e-10,20;DOID:0050687,2.17e-07,143|ontology_enrichment_uberon=UBERON:0001282!2.37e-07!1;UBERON:0009842!2.37e-07!1;UBERON:0003704!2.37e-07!1;UBERON:0001171!2.37e-07!1;UBERON:0001172!2.37e-07!1|ontology_enrichment_uberon_v019=UBERON:0001282;3.67e-23;1!UBERON:0009842;3.67e-23;1!UBERON:0003704;3.67e-23;1!UBERON:0001171;3.67e-23;1!UBERON:0001172;3.67e-23;1!UBERON:0002046;1.08e-18;5!UBERON:0002294;1.31e-13;7!UBERON:0001173;1.31e-13;7!UBERON:0002110;9.31e-09;3!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.40e-23,1;UBERON:0009842,6.40e-23,1;UBERON:0003704,6.40e-23,1;UBERON:0001171,6.40e-23,1;UBERON:0001172,6.40e-23,1;UBERON:0002046,9.47e-19,5;UBERON:0004117,9.47e-19,5;UBERON:0007689,9.47e-19,5;UBERON:0007123,9.47e-19,5;UBERON:0003091,9.47e-19,5;UBERON:0002294,9.69e-11,9;UBERON:0001173,9.69e-11,9;UBERON:0004912,9.69e-11,9;UBERON:0009722,4.61e-09,11;UBERON:0007690,4.61e-09,11;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0003929,6.31e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6874140274051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52542140314453,0,0,0,0,0,0,0,0,0,0,0,1.91858694505451,0.397429223405979,0,0,3.12619398980981,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,3.3424595179512,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:106503385..106503391,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_at_chr9:106503385..106503391,- | |||
|id=chr9:106503385..106503391,- | |||
|ontology_enrichment_celltype=CL:0000054!1.52e-12!2;CL:0000137!1.52e-12!2;CL:0000092!1.52e-12!2;CL:0002573!2.96e-08!2;CL:0000243!4.95e-08!15;CL:0000125!4.95e-08!15;CL:0000030!4.95e-08!15;CL:0000339!4.95e-08!15;CL:0000095!3.67e-07!17;CL:0000123!3.67e-07!17;CL:0002127!9.73e-07!1;CL:0000914!9.73e-07!1;CL:0000911!9.73e-07!1;CL:0000814!9.73e-07!1;CL:0002042!9.73e-07!1;CL:0002039!9.73e-07!1;CL:0002040!9.73e-07!1;CL:0002041!9.73e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.75e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.85e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.08e-18;5 | |||
|ontology_enrichment_disease=DOID:1909!8.49e-13!2;DOID:200!1.52e-12!2;DOID:4305!1.52e-12!2;DOID:14566!5.04e-12!239;DOID:162!3.44e-10!235;DOID:201!4.15e-09!6;DOID:0060100!4.15e-09!6;DOID:2355!3.40e-07!1;DOID:0060085!4.06e-07!1;DOID:3165!4.06e-07!1;DOID:0060121!4.06e-07!1;DOID:2438!4.06e-07!1;DOID:4418!4.06e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.57e-10;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.45e-10,20;DOID:0050687,2.17e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.37e-07!1;UBERON:0009842!2.37e-07!1;UBERON:0003704!2.37e-07!1;UBERON:0001171!2.37e-07!1;UBERON:0001172!2.37e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.67e-23;1!UBERON:0009842;3.67e-23;1!UBERON:0003704;3.67e-23;1!UBERON:0001171;3.67e-23;1!UBERON:0001172;3.67e-23;1!UBERON:0002046;1.08e-18;5!UBERON:0002294;1.31e-13;7!UBERON:0001173;1.31e-13;7!UBERON:0002110;9.31e-09;3!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.40e-23,1;UBERON:0009842,6.40e-23,1;UBERON:0003704,6.40e-23,1;UBERON:0001171,6.40e-23,1;UBERON:0001172,6.40e-23,1;UBERON:0002046,9.47e-19,5;UBERON:0004117,9.47e-19,5;UBERON:0007689,9.47e-19,5;UBERON:0007123,9.47e-19,5;UBERON:0003091,9.47e-19,5;UBERON:0002294,9.69e-11,9;UBERON:0001173,9.69e-11,9;UBERON:0004912,9.69e-11,9;UBERON:0009722,4.61e-09,11;UBERON:0007690,4.61e-09,11;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0003929,6.31e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6874140274051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52542140314453,0,0,0,0,0,0,0,0,0,0,0,1.91858694505451,0.397429223405979,0,0,3.12619398980981,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,3.3424595179512,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:106503385..106503391,- | |||
}} |
Revision as of 06:45, 14 September 2013
Short description: | p@chr9:106503385..106503391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:106503385..106503391, - |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.85e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.40e-23 | 1 |
acinus | 6.40e-23 | 1 |
intrahepatic bile duct | 6.40e-23 | 1 |
portal lobule | 6.40e-23 | 1 |
hepatic acinus | 6.40e-23 | 1 |
thyroid gland | 9.47e-19 | 5 |
pharyngeal pouch | 9.47e-19 | 5 |
thyroid diverticulum | 9.47e-19 | 5 |
pharyngeal pouch 2 | 9.47e-19 | 5 |
thyroid primordium | 9.47e-19 | 5 |
biliary system | 9.69e-11 | 9 |
biliary tree | 9.69e-11 | 9 |
biliary bud | 9.69e-11 | 9 |
entire pharyngeal arch endoderm | 4.61e-09 | 11 |
early pharyngeal endoderm | 4.61e-09 | 11 |
gallbladder | 9.66e-09 | 3 |
gall bladder primordium | 9.66e-09 | 3 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
gut epithelium | 6.31e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.45e-10 | 20 |
cell type cancer | 2.17e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.