FFCP PHASE1:Mm9::chr5:13125513..13125537,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20346|HGNC=|MCL_coexpression_id=1387|UniProt=|association_with_transcript=-55bp_to_ENSMUST00000164976_5end|description=CAGE_peak_12_at_Sema3a_5end|id=chr5:13125513..13125537,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.17e-07!23;UBERON:0000020!1.57e-07!12;UBERON:0001032!1.57e-07!12;UBERON:0004456!1.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.35e-13,7;UBERON:0004710,3.35e-13,7;UBERON:0005419,3.35e-13,7;UBERON:0005417,3.35e-13,7;UBERON:0005729,3.35e-13,7;UBERON:0010708,2.33e-11,8;UBERON:0003102,1.93e-09,22;UBERON:0000026,8.61e-09,12;UBERON:0004708,8.61e-09,12;UBERON:0002101,8.61e-09,12;UBERON:0004357,8.61e-09,12;UBERON:0004347,8.61e-09,12;UBERON:0005732,8.61e-09,12;UBERON:0005733,8.61e-09,12;UBERON:0010707,5.59e-08,13|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0,0,0,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,3.20250421973039,0.251308704225729,0,0.511430914660661,0.20778804455956,0.648965052271031,1.32391173005411,0.248813941220186,0,0.210441855886474,6.76626303406059,3.67843367093557,2.52086981727489,1.65775299619287,0.95251098811859,1.2811372028485,0.0937017245597288,0.517406741478031,4.31135985865684,8.88798576788751,11.7887253189846,4.60311038097907,9.45360647367033,2.78601733217733,5.35033554660653,0.796137067273973,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,3.11476396215683,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.24645922567079,3.90928702448583,1.15479086080775,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,2.70091641046965,0.258717367565509,1.28602221018955,1.59606210278046,1.96205699362278,1.97458824722545,0,0,0,0,0.8244312647074,2.09903754704677,3.07595917133595,3.10368094408155,0.984845398470368,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,0,0.375364950902364,6.59345847362154,2.78678892802786,0,0,0,0,0,0,0,0,0,0,0,1.3492355185943,6.78342284781753,4.95127456686989,1.45864030240976,0.838452650511929,0.735374033800057,2.00022055021454,1.23621034343337,0.962757628775446,1.01078884705519,1.77435509923168,0.565879024158229,0.842773567228942,1.15245274328765,1.09127391015665,0.476293691283074,1.15884325944855,1.54327376370964,0.824171801606613,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.726732083161643,1.31753132581463,1.35383372626682,0.914639864363863,1.31534855718921,1.08643291076689,0,1.42362021749009,1.0835493061312,2.86461730218783,1.08455788830176,1.15743966588685,1.74867404556562,1.16965804222704,1.07435527024149,2.10417165275728,0.441182838239031,0.695603506861264|short_description=p12@Sema3a}} | ||
|EntrezGene=20346 | |||
|HGNC= | |||
|MCL_coexpression_id=1387 | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_ENSMUST00000164976_5end | |||
|description=CAGE_peak_12_at_Sema3a_5end | |||
|id=chr5:13125513..13125537,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.17e-07!23;UBERON:0000020!1.57e-07!12;UBERON:0001032!1.57e-07!12;UBERON:0004456!1.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.35e-13,7;UBERON:0004710,3.35e-13,7;UBERON:0005419,3.35e-13,7;UBERON:0005417,3.35e-13,7;UBERON:0005729,3.35e-13,7;UBERON:0010708,2.33e-11,8;UBERON:0003102,1.93e-09,22;UBERON:0000026,8.61e-09,12;UBERON:0004708,8.61e-09,12;UBERON:0002101,8.61e-09,12;UBERON:0004357,8.61e-09,12;UBERON:0004347,8.61e-09,12;UBERON:0005732,8.61e-09,12;UBERON:0005733,8.61e-09,12;UBERON:0010707,5.59e-08,13 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0,0,0,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,3.20250421973039,0.251308704225729,0,0.511430914660661,0.20778804455956,0.648965052271031,1.32391173005411,0.248813941220186,0,0.210441855886474,6.76626303406059,3.67843367093557,2.52086981727489,1.65775299619287,0.95251098811859,1.2811372028485,0.0937017245597288,0.517406741478031,4.31135985865684,8.88798576788751,11.7887253189846,4.60311038097907,9.45360647367033,2.78601733217733,5.35033554660653,0.796137067273973,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,3.11476396215683,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.24645922567079,3.90928702448583,1.15479086080775,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,2.70091641046965,0.258717367565509,1.28602221018955,1.59606210278046,1.96205699362278,1.97458824722545,0,0,0,0,0.8244312647074,2.09903754704677,3.07595917133595,3.10368094408155,0.984845398470368,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,0,0.375364950902364,6.59345847362154,2.78678892802786,0,0,0,0,0,0,0,0,0,0,0,1.3492355185943,6.78342284781753,4.95127456686989,1.45864030240976,0.838452650511929,0.735374033800057,2.00022055021454,1.23621034343337,0.962757628775446,1.01078884705519,1.77435509923168,0.565879024158229,0.842773567228942,1.15245274328765,1.09127391015665,0.476293691283074,1.15884325944855,1.54327376370964,0.824171801606613,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.726732083161643,1.31753132581463,1.35383372626682,0.914639864363863,1.31534855718921,1.08643291076689,0,1.42362021749009,1.0835493061312,2.86461730218783,1.08455788830176,1.15743966588685,1.74867404556562,1.16965804222704,1.07435527024149,2.10417165275728,0.441182838239031,0.695603506861264 | |||
|short_description=p12@Sema3a | |||
}} |
Revision as of 06:33, 14 September 2013
Short description: | p12@Sema3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Sema3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1387 |
Association with transcript: | -55bp_to_ENSMUST00000164976_5end |
EntrezGene: | Sema3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 3.35e-13 | 7 |
pectoral appendage | 3.35e-13 | 7 |
pectoral appendage bud | 3.35e-13 | 7 |
forelimb bud | 3.35e-13 | 7 |
forelimb/pectoral fin field | 3.35e-13 | 7 |
pectoral complex | 2.33e-11 | 8 |
surface structure | 1.93e-09 | 22 |
appendage | 8.61e-09 | 12 |
paired limb/fin | 8.61e-09 | 12 |
limb | 8.61e-09 | 12 |
paired limb/fin bud | 8.61e-09 | 12 |
limb bud | 8.61e-09 | 12 |
limb/fin field | 8.61e-09 | 12 |
limb field | 8.61e-09 | 12 |
appendage girdle complex | 5.59e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.