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FFCP PHASE1:Mm9::chr5:123632713..123632740,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=15445|HGNC=|MCL_coexpression_id=8|UniProt=P49429,D3Z1U3|association_with_transcript=0bp_to_ENSMUST00000031398,ENSMUST00000154713,ENSMUST00000156539_5end|description=CAGE_peak_1_at_Hpd_5end|id=chr5:123632713..123632740,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!3.99e-16!23;UBERON:0009856!3.99e-16!23;UBERON:0002107!1.56e-15!22;UBERON:0007499!1.56e-15!22;UBERON:0006925!1.56e-15!22;UBERON:0009497!1.56e-15!22;UBERON:0000015!1.56e-15!22;UBERON:0002423!1.56e-15!22;UBERON:0006235!1.56e-15!22;UBERON:0008835!1.56e-15!22;UBERON:0003894!1.56e-15!22;UBERON:0004161!1.56e-15!22;UBERON:0008836!1.56e-15!22;UBERON:0005172!5.12e-15!49;UBERON:0005173!5.12e-15!49;UBERON:0002417!5.12e-15!49;UBERON:0000916!5.12e-15!49;UBERON:0002365!3.01e-12!25;UBERON:0002330!3.01e-12!25;UBERON:0009569!1.94e-11!66;UBERON:0001007!1.02e-10!128;UBERON:0001555!1.02e-10!128;UBERON:0007026!1.02e-10!128;UBERON:0004921!3.54e-10!126;UBERON:0004185!3.54e-10!126;UBERON:0004119!4.04e-10!130;UBERON:0000925!4.04e-10!130;UBERON:0006595!4.04e-10!130;UBERON:0005177!4.35e-10!85;UBERON:0005409!3.04e-09!59;UBERON:0000160!5.39e-08!43;UBERON:0005256!6.47e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0009854,9.72e-19,23;UBERON:0009856,9.72e-19,23;UBERON:0002107,4.85e-18,22;UBERON:0007499,4.85e-18,22;UBERON:0006925,4.85e-18,22;UBERON:0009497,4.85e-18,22;UBERON:0000015,4.85e-18,22;UBERON:0002423,4.85e-18,22;UBERON:0006235,4.85e-18,22;UBERON:0008835,4.85e-18,22;UBERON:0003894,4.85e-18,22;UBERON:0004161,4.85e-18,22;UBERON:0008836,4.85e-18,22;UBERON:0002365,1.08e-14,25;UBERON:0002330,1.08e-14,25;UBERON:0005172,7.50e-14,49;UBERON:0005173,7.50e-14,49;UBERON:0002417,7.50e-14,49;UBERON:0000916,7.50e-14,49;UBERON:0005256,6.76e-10,45;UBERON:0003104,4.08e-08,61;UBERON:0009142,4.08e-08,61;UBERON:0009569,1.35e-07,66;UBERON:0000160,1.69e-07,31;UBERON:0005409,2.32e-07,47;UBERON:0001007,6.61e-07,116;UBERON:0001555,6.61e-07,116;UBERON:0007026,6.61e-07,116|phase1_expression=0,1.04692622291808,0.909998478779072,1.20985684522732,0.500895729946347,15.1091344720701,17.0537227634734,0,0,0,0,0,0,0,0,0,0,0,0,0,71.946623467805,0,0,9.91953021319121,8.94696196161963,2.8711598205751,4.30761996159075,9.69620547086501,19.0023419456374,12.3494763582366,20.8426680015986,0,0,0,2.59966457776147,3.82339684324532,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0,0.372798891650601,0,0,2.89864488701678,3032.13374248241,1955.59755574349,3529.11917011969,3346.3485498555,3310.47066876221,1507.10907243383,0,0,0,0,0,0,0,0,0,0,2647.12488352697,0,13.2113503767694,1.21439728736295,11.5696881758614,26.9820131789588,19.4432206312883,34.4534911907615,19.35265506477,0.247194967734374,2.02439099687876,0,0,0,0,29.8226817948995,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.373220911830279,0,0,0,0,0,6.63101198477146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0,0,1.09775057645525,2.28150911892632,0,0,1.32167513193519,3.70230793328962,0.426576501070468,0.464473343720877,1.80414445850931,3.22693639397348,4.00280478920767,13.8864707062168,12.8122846617018,10.2113351928887,11.8127548136127,12.9321706826748,8.57841983324129,10.7858329038507,18.8040103390984,28.2780608021201,0.379335801906163,1.48523066392647,0,0.610953983535943,1.35766741017338,2.52488951605147,0.442655759869801,42.5117226181254,20.4098346193787,63.3027450918837,4976.55025091197,5.00535317148282,10.2210677458866,17.5392447660186,60.2494560523854,162.071051353624,312.680545987584,544.608788194384,1290.92067558283,1137.50793483822,503.188722845741,1174.4768308418,1602.62548911638,3087.0190462696,3606.78499885804,7961.76543305965,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,6.9032655856944,0.780534591431195,0.157635144106191,0,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,2.52406575533005,0,0.215423397732799,0,0.445597348164788,3.96307143104365,1.61924280669958,2.04579100537918,0.395287777946524,0,0,19.9433476107326,1.14020871547503,0,0,0.242780636154981,0.906970670894253,0.565815239267694,1.47650946440386,0.922305443831782,7.75284879504663,2.18120237686503,4.9909632973861,2.21225730555071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,11.659233465194,0,0,1.23832120777933,0.925972636848558,0.188368457004691,0.27338845544205,0,0,0,0,9.54670618015114,0,1.42323626988794,1.29606408986162,0.836353184057875,8.51613998610093,38.4363387196739,91.0841082093202,3.66458318777641,17.8868663142674,0,0,0,0,0,0.904118764344118,0.675824501963113,0.117357238645754,14.4526867176785,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,1.53660245178721,11.9122291363464,23.0574478890781,44.6739725533534,29.3365680698132,27.196627555534,29.2036480728552,30.3236654116557,27.3757643881459,27.162193159595,26.313263599037,30.1558467826934,26.5926221264489,22.3858034903045,21.7862532776328,24.6923802193542,23.0768104449852,22.3742358604284,26.400932433677,22.1844757699172,24.5589275645741,28.4878976599364,23.5273451038327,26.6536014858781,25.4269882293154,24.7285528751572,30.0127091599355,30.3016826695179,22.3033834073447,23.247057840633,22.0984763311632,22.775715654337,35.1090031985677,0,68.7758928829501,110.658592834874,1.72159498861959,8.38247392654159,2.08681052058379|short_description=p1@Hpd}}
|EntrezGene=15445
|HGNC=
|MCL_coexpression_id=8
|UniProt=P49429,D3Z1U3
|association_with_transcript=0bp_to_ENSMUST00000031398,ENSMUST00000154713,ENSMUST00000156539_5end
|description=CAGE_peak_1_at_Hpd_5end
|id=chr5:123632713..123632740,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!3.99e-16!23;UBERON:0009856!3.99e-16!23;UBERON:0002107!1.56e-15!22;UBERON:0007499!1.56e-15!22;UBERON:0006925!1.56e-15!22;UBERON:0009497!1.56e-15!22;UBERON:0000015!1.56e-15!22;UBERON:0002423!1.56e-15!22;UBERON:0006235!1.56e-15!22;UBERON:0008835!1.56e-15!22;UBERON:0003894!1.56e-15!22;UBERON:0004161!1.56e-15!22;UBERON:0008836!1.56e-15!22;UBERON:0005172!5.12e-15!49;UBERON:0005173!5.12e-15!49;UBERON:0002417!5.12e-15!49;UBERON:0000916!5.12e-15!49;UBERON:0002365!3.01e-12!25;UBERON:0002330!3.01e-12!25;UBERON:0009569!1.94e-11!66;UBERON:0001007!1.02e-10!128;UBERON:0001555!1.02e-10!128;UBERON:0007026!1.02e-10!128;UBERON:0004921!3.54e-10!126;UBERON:0004185!3.54e-10!126;UBERON:0004119!4.04e-10!130;UBERON:0000925!4.04e-10!130;UBERON:0006595!4.04e-10!130;UBERON:0005177!4.35e-10!85;UBERON:0005409!3.04e-09!59;UBERON:0000160!5.39e-08!43;UBERON:0005256!6.47e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0009854,9.72e-19,23;UBERON:0009856,9.72e-19,23;UBERON:0002107,4.85e-18,22;UBERON:0007499,4.85e-18,22;UBERON:0006925,4.85e-18,22;UBERON:0009497,4.85e-18,22;UBERON:0000015,4.85e-18,22;UBERON:0002423,4.85e-18,22;UBERON:0006235,4.85e-18,22;UBERON:0008835,4.85e-18,22;UBERON:0003894,4.85e-18,22;UBERON:0004161,4.85e-18,22;UBERON:0008836,4.85e-18,22;UBERON:0002365,1.08e-14,25;UBERON:0002330,1.08e-14,25;UBERON:0005172,7.50e-14,49;UBERON:0005173,7.50e-14,49;UBERON:0002417,7.50e-14,49;UBERON:0000916,7.50e-14,49;UBERON:0005256,6.76e-10,45;UBERON:0003104,4.08e-08,61;UBERON:0009142,4.08e-08,61;UBERON:0009569,1.35e-07,66;UBERON:0000160,1.69e-07,31;UBERON:0005409,2.32e-07,47;UBERON:0001007,6.61e-07,116;UBERON:0001555,6.61e-07,116;UBERON:0007026,6.61e-07,116
|phase1_expression=0,1.04692622291808,0.909998478779072,1.20985684522732,0.500895729946347,15.1091344720701,17.0537227634734,0,0,0,0,0,0,0,0,0,0,0,0,0,71.946623467805,0,0,9.91953021319121,8.94696196161963,2.8711598205751,4.30761996159075,9.69620547086501,19.0023419456374,12.3494763582366,20.8426680015986,0,0,0,2.59966457776147,3.82339684324532,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0,0.372798891650601,0,0,2.89864488701678,3032.13374248241,1955.59755574349,3529.11917011969,3346.3485498555,3310.47066876221,1507.10907243383,0,0,0,0,0,0,0,0,0,0,2647.12488352697,0,13.2113503767694,1.21439728736295,11.5696881758614,26.9820131789588,19.4432206312883,34.4534911907615,19.35265506477,0.247194967734374,2.02439099687876,0,0,0,0,29.8226817948995,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.373220911830279,0,0,0,0,0,6.63101198477146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0,0,1.09775057645525,2.28150911892632,0,0,1.32167513193519,3.70230793328962,0.426576501070468,0.464473343720877,1.80414445850931,3.22693639397348,4.00280478920767,13.8864707062168,12.8122846617018,10.2113351928887,11.8127548136127,12.9321706826748,8.57841983324129,10.7858329038507,18.8040103390984,28.2780608021201,0.379335801906163,1.48523066392647,0,0.610953983535943,1.35766741017338,2.52488951605147,0.442655759869801,42.5117226181254,20.4098346193787,63.3027450918837,4976.55025091197,5.00535317148282,10.2210677458866,17.5392447660186,60.2494560523854,162.071051353624,312.680545987584,544.608788194384,1290.92067558283,1137.50793483822,503.188722845741,1174.4768308418,1602.62548911638,3087.0190462696,3606.78499885804,7961.76543305965,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,6.9032655856944,0.780534591431195,0.157635144106191,0,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,2.52406575533005,0,0.215423397732799,0,0.445597348164788,3.96307143104365,1.61924280669958,2.04579100537918,0.395287777946524,0,0,19.9433476107326,1.14020871547503,0,0,0.242780636154981,0.906970670894253,0.565815239267694,1.47650946440386,0.922305443831782,7.75284879504663,2.18120237686503,4.9909632973861,2.21225730555071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,11.659233465194,0,0,1.23832120777933,0.925972636848558,0.188368457004691,0.27338845544205,0,0,0,0,9.54670618015114,0,1.42323626988794,1.29606408986162,0.836353184057875,8.51613998610093,38.4363387196739,91.0841082093202,3.66458318777641,17.8868663142674,0,0,0,0,0,0.904118764344118,0.675824501963113,0.117357238645754,14.4526867176785,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,1.53660245178721,11.9122291363464,23.0574478890781,44.6739725533534,29.3365680698132,27.196627555534,29.2036480728552,30.3236654116557,27.3757643881459,27.162193159595,26.313263599037,30.1558467826934,26.5926221264489,22.3858034903045,21.7862532776328,24.6923802193542,23.0768104449852,22.3742358604284,26.400932433677,22.1844757699172,24.5589275645741,28.4878976599364,23.5273451038327,26.6536014858781,25.4269882293154,24.7285528751572,30.0127091599355,30.3016826695179,22.3033834073447,23.247057840633,22.0984763311632,22.775715654337,35.1090031985677,0,68.7758928829501,110.658592834874,1.72159498861959,8.38247392654159,2.08681052058379
|short_description=p1@Hpd
}}

Revision as of 06:23, 14 September 2013

Short description:p1@Hpd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hpd_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000031398, ENSMUST00000154713, ENSMUST00000156539_5end
EntrezGene:Hpd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hpd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A371.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.95
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B919.00
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C820.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73032.13
Mouse hepatocyte, donor1.CNhs13078.11714-123C41955.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C83529.12
Mouse hepatocyte, donor6.CNhs13090.11822-124F43346.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F63310.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71507.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62647.12
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D713.21
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I126.98
adrenal gland, embryo E18.CNhs11026.1262-18F519.44
adrenal gland, neonate N00.CNhs11191.1311-23C134.45
adrenal gland, neonate N25.CNhs11223.1377-27I319.35
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H718.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E910.21
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E318.80
intestine, neonate N30.CNhs11131.1384-42G128.28
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I142.51
kidney, neonate N25.CNhs11122.1353-25F320.41
kidney, neonate N30.CNhs11203.1385-42H163.30
liver, adult pregnant day01.CNhs10466.508-5B24976.55
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E117.54
liver, embryo E15.CNhs10520.433-16D760.25
liver, embryo E16.CNhs10523.462-17F5162.07
liver, embryo E17.CNhs10510.481-18A3312.68
liver, embryo E18.CNhs10579.499-43G4544.61
liver, neonate N00.CNhs11117.641-24F41290.92
liver, neonate N03.CNhs11123.1345-25G21137.51
liver, neonate N06.CNhs11101.684-20A8503.19
liver, neonate N07.CNhs11103.716-20H21174.48
liver, neonate N10.CNhs11115.751-24B91602.63
liver, neonate N20.CNhs11220.823-25A33087.02
liver, neonate N25.CNhs11198.1368-26H13606.78
liver, neonate N30.CNhs11106.1382-42D17961.77
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H719.94
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B838.44
stomach, neonate N07.CNhs11210.718-18A991.08
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I414.45
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B123.06
whole body, embryo E16.CNhs10514.453-14F244.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.78
whole body, embryo E17.5.CNhs10513.490-9F935.11
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B368.78
whole body, neonate N00.CNhs10525.657-19C2110.66
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum9.72e-1923
sac9.72e-1923
liver4.85e-1822
epithelial sac4.85e-1822
digestive gland4.85e-1822
epithelium of foregut-midgut junction4.85e-1822
anatomical boundary4.85e-1822
hepatobiliary system4.85e-1822
foregut-midgut junction4.85e-1822
hepatic diverticulum4.85e-1822
liver primordium4.85e-1822
septum transversum4.85e-1822
liver bud4.85e-1822
exocrine gland1.08e-1425
exocrine system1.08e-1425
abdomen element7.50e-1449
abdominal segment element7.50e-1449
abdominal segment of trunk7.50e-1449
abdomen7.50e-1449
trunk mesenchyme6.76e-1045
mesenchyme4.08e-0861
entire embryonic mesenchyme4.08e-0861
subdivision of trunk1.35e-0766
intestine1.69e-0731
gastrointestinal system2.32e-0747
digestive system6.61e-07116
digestive tract6.61e-07116
primitive gut6.61e-07116







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