FFCP PHASE1:Mm9::chr5:120926531..120926547,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=231691|HGNC=|MCL_coexpression_id=120|UniProt=Q8VBT2|association_with_transcript=0bp_to_ENSMUST00000066540_5end|description=CAGE_peak_1_at_Sds_5end|id=chr5:120926531..120926547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.55e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.24e-16!22;UBERON:0007499!3.24e-16!22;UBERON:0006925!3.24e-16!22;UBERON:0009497!3.24e-16!22;UBERON:0000015!3.24e-16!22;UBERON:0002423!3.24e-16!22;UBERON:0006235!3.24e-16!22;UBERON:0008835!3.24e-16!22;UBERON:0003894!3.24e-16!22;UBERON:0004161!3.24e-16!22;UBERON:0008836!3.24e-16!22;UBERON:0009854!4.20e-15!23;UBERON:0009856!4.20e-15!23;UBERON:0002365!3.68e-13!25;UBERON:0002330!3.68e-13!25;UBERON:0003914!2.33e-08!47;UBERON:0005172!8.56e-08!49;UBERON:0005173!8.56e-08!49;UBERON:0002417!8.56e-08!49;UBERON:0000916!8.56e-08!49;UBERON:0000466!1.20e-07!79;UBERON:0000949!1.84e-07!72;UBERON:0005256!3.58e-07!47;UBERON:0005177!4.13e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.45e-26,22;UBERON:0007499,4.45e-26,22;UBERON:0006925,4.45e-26,22;UBERON:0009497,4.45e-26,22;UBERON:0000015,4.45e-26,22;UBERON:0002423,4.45e-26,22;UBERON:0006235,4.45e-26,22;UBERON:0008835,4.45e-26,22;UBERON:0003894,4.45e-26,22;UBERON:0004161,4.45e-26,22;UBERON:0008836,4.45e-26,22;UBERON:0009854,1.04e-24,23;UBERON:0009856,1.04e-24,23;UBERON:0002365,2.64e-22,25;UBERON:0002330,2.64e-22,25;UBERON:0005256,1.02e-15,45;UBERON:0003914,7.14e-15,47;UBERON:0005172,1.58e-12,49;UBERON:0005173,1.58e-12,49;UBERON:0002417,1.58e-12,49;UBERON:0000916,1.58e-12,49;UBERON:0000949,1.35e-11,72;UBERON:0003104,5.25e-10,61;UBERON:0009142,5.25e-10,61;UBERON:0005177,5.91e-10,79;UBERON:0002368,3.45e-09,60;UBERON:0002100,9.16e-09,90;UBERON:0002530,4.64e-08,65;UBERON:0009569,7.43e-08,66;UBERON:0003929,2.08e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,1.10115880999389,0.510749352340751,0.921639199537461,0,0,0,1.11673199600552,1.68828783009504,0.763991238884051,0,0.142371680799103,0,0,0,9.85539261585705,672.851471799444,343.385523522414,953.115836432385,908.387431591841,579.298765016855,215.160851641844,0,0,0,0,0,0,0,0,0,0,351.800533414424,0,2.82040064223167,0,0,0,0.301445281105245,3.52766121407114,1.63366568728578,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64769703345305,0.915001205637253,0,0,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0.16455984991348,0,0.243206428637567,1.75439984910399,1.97595103761946,8.45500438190342,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.295220295959204,0,0.246794327843601,534.504086638129,0,0.196558995113203,0.224862112384854,0.608580364165509,4.58236603529592,8.40265310878685,10.9324532231308,427.226322552218,49.6956157870427,63.258010872036,97.1287873414794,134.80027478549,226.815832396506,263.534800463689,1716.53404901086,0.554259570499814,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.631016438832513,0,0,0,0,1.13230612315533,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,0.81443479676788,0,0,1.21390318077491,0.302323556964751,5.28094223316515,8.26845300066164,7.99331384654211,6.71913562237375,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,0,1.21377911746339,4.21532624199213,0,0,0,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0.651021924219751,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,1.11123363900808,1.44224540067226,0.320919209591815,1.01078884705519,1.2673964994512,1.13175804831646,0.842773567228942,0.832326981263301,0.918967503289812,1.42888107384922,0.463537303779422,0.578727661391115,0.412085900803307,2.20798380201596,2.40008476669791,0.532427418478012,0.953744759789284,0.290692833264657,0.846984423737976,1.18460451048347,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,0.711810108745045,0.886540341380071,0,0.309873682371932,0.771626443924566,0,0.701794825336225,8.16510005383534,0.57386499620653,0.441182838239031,0.231867835620421|short_description=p1@Sds}} | ||
|EntrezGene=231691 | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=Q8VBT2 | |||
|association_with_transcript=0bp_to_ENSMUST00000066540_5end | |||
|description=CAGE_peak_1_at_Sds_5end | |||
|id=chr5:120926531..120926547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.55e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.24e-16!22;UBERON:0007499!3.24e-16!22;UBERON:0006925!3.24e-16!22;UBERON:0009497!3.24e-16!22;UBERON:0000015!3.24e-16!22;UBERON:0002423!3.24e-16!22;UBERON:0006235!3.24e-16!22;UBERON:0008835!3.24e-16!22;UBERON:0003894!3.24e-16!22;UBERON:0004161!3.24e-16!22;UBERON:0008836!3.24e-16!22;UBERON:0009854!4.20e-15!23;UBERON:0009856!4.20e-15!23;UBERON:0002365!3.68e-13!25;UBERON:0002330!3.68e-13!25;UBERON:0003914!2.33e-08!47;UBERON:0005172!8.56e-08!49;UBERON:0005173!8.56e-08!49;UBERON:0002417!8.56e-08!49;UBERON:0000916!8.56e-08!49;UBERON:0000466!1.20e-07!79;UBERON:0000949!1.84e-07!72;UBERON:0005256!3.58e-07!47;UBERON:0005177!4.13e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.45e-26,22;UBERON:0007499,4.45e-26,22;UBERON:0006925,4.45e-26,22;UBERON:0009497,4.45e-26,22;UBERON:0000015,4.45e-26,22;UBERON:0002423,4.45e-26,22;UBERON:0006235,4.45e-26,22;UBERON:0008835,4.45e-26,22;UBERON:0003894,4.45e-26,22;UBERON:0004161,4.45e-26,22;UBERON:0008836,4.45e-26,22;UBERON:0009854,1.04e-24,23;UBERON:0009856,1.04e-24,23;UBERON:0002365,2.64e-22,25;UBERON:0002330,2.64e-22,25;UBERON:0005256,1.02e-15,45;UBERON:0003914,7.14e-15,47;UBERON:0005172,1.58e-12,49;UBERON:0005173,1.58e-12,49;UBERON:0002417,1.58e-12,49;UBERON:0000916,1.58e-12,49;UBERON:0000949,1.35e-11,72;UBERON:0003104,5.25e-10,61;UBERON:0009142,5.25e-10,61;UBERON:0005177,5.91e-10,79;UBERON:0002368,3.45e-09,60;UBERON:0002100,9.16e-09,90;UBERON:0002530,4.64e-08,65;UBERON:0009569,7.43e-08,66;UBERON:0003929,2.08e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,1.10115880999389,0.510749352340751,0.921639199537461,0,0,0,1.11673199600552,1.68828783009504,0.763991238884051,0,0.142371680799103,0,0,0,9.85539261585705,672.851471799444,343.385523522414,953.115836432385,908.387431591841,579.298765016855,215.160851641844,0,0,0,0,0,0,0,0,0,0,351.800533414424,0,2.82040064223167,0,0,0,0.301445281105245,3.52766121407114,1.63366568728578,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64769703345305,0.915001205637253,0,0,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0.16455984991348,0,0.243206428637567,1.75439984910399,1.97595103761946,8.45500438190342,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.295220295959204,0,0.246794327843601,534.504086638129,0,0.196558995113203,0.224862112384854,0.608580364165509,4.58236603529592,8.40265310878685,10.9324532231308,427.226322552218,49.6956157870427,63.258010872036,97.1287873414794,134.80027478549,226.815832396506,263.534800463689,1716.53404901086,0.554259570499814,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.631016438832513,0,0,0,0,1.13230612315533,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,0.81443479676788,0,0,1.21390318077491,0.302323556964751,5.28094223316515,8.26845300066164,7.99331384654211,6.71913562237375,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,0,1.21377911746339,4.21532624199213,0,0,0,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0.651021924219751,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,1.11123363900808,1.44224540067226,0.320919209591815,1.01078884705519,1.2673964994512,1.13175804831646,0.842773567228942,0.832326981263301,0.918967503289812,1.42888107384922,0.463537303779422,0.578727661391115,0.412085900803307,2.20798380201596,2.40008476669791,0.532427418478012,0.953744759789284,0.290692833264657,0.846984423737976,1.18460451048347,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,0.711810108745045,0.886540341380071,0,0.309873682371932,0.771626443924566,0,0.701794825336225,8.16510005383534,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Sds | |||
}} |
Revision as of 06:14, 14 September 2013
Short description: | p1@Sds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sds_5end |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | 0bp_to_ENSMUST00000066540_5end |
EntrezGene: | Sds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.55e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 4.45e-26 | 22 |
epithelial sac | 4.45e-26 | 22 |
digestive gland | 4.45e-26 | 22 |
epithelium of foregut-midgut junction | 4.45e-26 | 22 |
anatomical boundary | 4.45e-26 | 22 |
hepatobiliary system | 4.45e-26 | 22 |
foregut-midgut junction | 4.45e-26 | 22 |
hepatic diverticulum | 4.45e-26 | 22 |
liver primordium | 4.45e-26 | 22 |
septum transversum | 4.45e-26 | 22 |
liver bud | 4.45e-26 | 22 |
digestive tract diverticulum | 1.04e-24 | 23 |
sac | 1.04e-24 | 23 |
exocrine gland | 2.64e-22 | 25 |
exocrine system | 2.64e-22 | 25 |
trunk mesenchyme | 1.02e-15 | 45 |
epithelial tube | 7.14e-15 | 47 |
abdomen element | 1.58e-12 | 49 |
abdominal segment element | 1.58e-12 | 49 |
abdominal segment of trunk | 1.58e-12 | 49 |
abdomen | 1.58e-12 | 49 |
endocrine system | 1.35e-11 | 72 |
mesenchyme | 5.25e-10 | 61 |
entire embryonic mesenchyme | 5.25e-10 | 61 |
trunk region element | 5.91e-10 | 79 |
endocrine gland | 3.45e-09 | 60 |
trunk | 9.16e-09 | 90 |
gland | 4.64e-08 | 65 |
subdivision of trunk | 7.43e-08 | 66 |
gut epithelium | 2.08e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.