FFCP PHASE1:Mm9::chr4:86315890..86315929,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11520|HGNC=|MCL_coexpression_id=28|UniProt=|association_with_transcript=0bp_to_ENSMUST00000134094_5end|description=CAGE_peak_1_at_Plin2_5end|id=chr4:86315890..86315929,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.74e-12!25;UBERON:0002330!1.74e-12!25;UBERON:0009854!4.72e-12!23;UBERON:0009856!4.72e-12!23;UBERON:0002107!8.83e-12!22;UBERON:0007499!8.83e-12!22;UBERON:0006925!8.83e-12!22;UBERON:0009497!8.83e-12!22;UBERON:0000015!8.83e-12!22;UBERON:0002423!8.83e-12!22;UBERON:0006235!8.83e-12!22;UBERON:0008835!8.83e-12!22;UBERON:0003894!8.83e-12!22;UBERON:0004161!8.83e-12!22;UBERON:0008836!8.83e-12!22;UBERON:0005256!1.08e-11!47;UBERON:0009569!4.90e-11!66;UBERON:0003914!1.10e-09!47;UBERON:0004119!1.04e-07!130;UBERON:0000925!1.04e-07!130;UBERON:0006595!1.04e-07!130;UBERON:0005172!1.67e-07!49;UBERON:0005173!1.67e-07!49;UBERON:0002417!1.67e-07!49;UBERON:0000916!1.67e-07!49;UBERON:0001007!3.91e-07!128;UBERON:0001555!3.91e-07!128;UBERON:0007026!3.91e-07!128;UBERON:0002100!3.98e-07!98;UBERON:0004921!6.99e-07!126;UBERON:0004185!6.99e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.40e-13,45;UBERON:0002365,1.74e-12,25;UBERON:0002330,1.74e-12,25;UBERON:0009854,4.72e-12,23;UBERON:0009856,4.72e-12,23;UBERON:0002107,8.83e-12,22;UBERON:0007499,8.83e-12,22;UBERON:0006925,8.83e-12,22;UBERON:0009497,8.83e-12,22;UBERON:0000015,8.83e-12,22;UBERON:0002423,8.83e-12,22;UBERON:0006235,8.83e-12,22;UBERON:0008835,8.83e-12,22;UBERON:0003894,8.83e-12,22;UBERON:0004161,8.83e-12,22;UBERON:0008836,8.83e-12,22;UBERON:0009569,4.90e-11,66;UBERON:0002100,2.99e-10,90;UBERON:0003914,1.10e-09,47;UBERON:0004119,1.57e-09,118;UBERON:0000925,1.57e-09,118;UBERON:0006595,1.57e-09,118;UBERON:0003104,2.87e-09,61;UBERON:0009142,2.87e-09,61;UBERON:0001007,6.96e-09,116;UBERON:0001555,6.96e-09,116;UBERON:0007026,6.96e-09,116;UBERON:0004921,1.32e-08,114;UBERON:0005177,2.12e-08,79;UBERON:0000160,1.01e-07,31;UBERON:0005172,1.66e-07,49;UBERON:0005173,1.66e-07,49;UBERON:0002417,1.66e-07,49;UBERON:0000916,1.66e-07,49|phase1_expression=17.6163731815273,92.82745843207,82.8098615688956,67.4495191214231,88.6585442005035,39.7873874431179,43.9191764319588,13.1705789910408,0.140788722151667,0.468129052643987,0.34243593645101,0.398860794976682,4.28001824828014,6.7313709862628,20.3196954707554,20.0450514715928,13.2916756844348,7.88655413395594,11.9289557236993,13.1560792057389,32.1463636771044,29.390121555462,18.2839852397255,54.2374313269649,48.1759490241057,94.1740421148633,62.4604894430658,74.5530465093176,95.0117097281869,65.0237734780621,39.2463003859889,12.065582795733,6.76571266343027,15.8481681015439,51.4155883157269,50.8678014796987,40.4255325399491,245.678067242565,224.243243878331,146.06312456869,245.292530508933,227.454146491162,183.522913445776,67.3547976169339,66.3005130175625,41.48156598854,13.3006528539167,13.2995345392072,33.8316721411087,23.1371579898397,29.3971485413261,23.0004102983955,1.51004345451963,4.35217285206807,2.35265659399725,91.5843592287971,91.1176339005246,66.5216999037901,4.24864567805155,5.81890077199236,6.33831403506179,63.3639274969277,48.9112137861127,95.839319890469,97.8977698941305,86.6785740234242,46.7376172408711,41.4955769747279,6.947204024668,5.8052553482627,7.36137364729837,5.99867067247988,7.73039893330647,8.69684674426174,9.00947427571422,6.43453150627015,3.30347642998166,3.57524546638526,2.61131106535614,7.38563211289086,8.69132614222892,8.33461392890816,6.42120897703176,7.31591393041184,5.34793867218835,9.1334861496837,7.68807076315156,10.9975673036927,75.6504671398509,83.1287161174641,46.3783181922684,322.65895386802,255.669221474114,248.263468153396,147.499246760621,232.973981290615,163.898638293754,66.8086864505986,56.8931350080283,43.4607676647719,18.0279577314151,44.9142670950112,22.9324715735981,7.11066703153331,205.449997919642,211.808847537182,193.110337995647,408.435737755078,69.1364149337949,146.957717674177,42.156934404171,56.3261134877461,76.5643450890114,96.6132125942311,105.241892886456,203.328544771415,146.092225931015,297.730075898098,50.4228014611428,41.5740804364842,35.7763259905838,33.9412677194656,85.7402101603362,7.02673912827713,6.49284791121711,48.792297544841,21.2072770375479,23.9961092397363,38.2481383489925,4.94309110035915,2.74500361691176,5.78010019719176,1.56441888173049,2.55715457330331,4.57133698031032,4.54275536589721,31.6720421574484,47.5234627730555,7.07623723614289,2361.57850675801,28.8867383377202,24.3696230699481,24.8485739131382,19.4409215008072,17.6894897793452,24.4697205744063,20.8954845768195,959.013395329531,31.6884949611278,22.5036235399705,24.6331573829528,24.9883134967435,16.6828349535359,17.4126083261083,21.812906459242,34.4329281595993,54.0704154231191,42.462404673928,71.6092018476893,21.7482061162277,32.5991223373724,26.2890609733082,31.2503050972478,30.3016916891002,31.3162239161378,30.4619467623034,27.6321603441608,29.8919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| ||
|EntrezGene=11520 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000134094_5end | |||
|description=CAGE_peak_1_at_Plin2_5end | |||
|id=chr4:86315890..86315929,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.74e-12!25;UBERON:0002330!1.74e-12!25;UBERON:0009854!4.72e-12!23;UBERON:0009856!4.72e-12!23;UBERON:0002107!8.83e-12!22;UBERON:0007499!8.83e-12!22;UBERON:0006925!8.83e-12!22;UBERON:0009497!8.83e-12!22;UBERON:0000015!8.83e-12!22;UBERON:0002423!8.83e-12!22;UBERON:0006235!8.83e-12!22;UBERON:0008835!8.83e-12!22;UBERON:0003894!8.83e-12!22;UBERON:0004161!8.83e-12!22;UBERON:0008836!8.83e-12!22;UBERON:0005256!1.08e-11!47;UBERON:0009569!4.90e-11!66;UBERON:0003914!1.10e-09!47;UBERON:0004119!1.04e-07!130;UBERON:0000925!1.04e-07!130;UBERON:0006595!1.04e-07!130;UBERON:0005172!1.67e-07!49;UBERON:0005173!1.67e-07!49;UBERON:0002417!1.67e-07!49;UBERON:0000916!1.67e-07!49;UBERON:0001007!3.91e-07!128;UBERON:0001555!3.91e-07!128;UBERON:0007026!3.91e-07!128;UBERON:0002100!3.98e-07!98;UBERON:0004921!6.99e-07!126;UBERON:0004185!6.99e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.40e-13,45;UBERON:0002365,1.74e-12,25;UBERON:0002330,1.74e-12,25;UBERON:0009854,4.72e-12,23;UBERON:0009856,4.72e-12,23;UBERON:0002107,8.83e-12,22;UBERON:0007499,8.83e-12,22;UBERON:0006925,8.83e-12,22;UBERON:0009497,8.83e-12,22;UBERON:0000015,8.83e-12,22;UBERON:0002423,8.83e-12,22;UBERON:0006235,8.83e-12,22;UBERON:0008835,8.83e-12,22;UBERON:0003894,8.83e-12,22;UBERON:0004161,8.83e-12,22;UBERON:0008836,8.83e-12,22;UBERON:0009569,4.90e-11,66;UBERON:0002100,2.99e-10,90;UBERON:0003914,1.10e-09,47;UBERON:0004119,1.57e-09,118;UBERON:0000925,1.57e-09,118;UBERON:0006595,1.57e-09,118;UBERON:0003104,2.87e-09,61;UBERON:0009142,2.87e-09,61;UBERON:0001007,6.96e-09,116;UBERON:0001555,6.96e-09,116;UBERON:0007026,6.96e-09,116;UBERON:0004921,1.32e-08,114;UBERON:0005177,2.12e-08,79;UBERON:0000160,1.01e-07,31;UBERON:0005172,1.66e-07,49;UBERON:0005173,1.66e-07,49;UBERON:0002417,1.66e-07,49;UBERON:0000916,1.66e-07,49 | |||
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| |||
|short_description=p1@Plin2 | |||
}} |
Revision as of 05:32, 14 September 2013
Short description: | p1@Plin2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plin2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 0bp_to_ENSMUST00000134094_5end |
EntrezGene: | Plin2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 6.40e-13 | 45 |
exocrine gland | 1.74e-12 | 25 |
exocrine system | 1.74e-12 | 25 |
digestive tract diverticulum | 4.72e-12 | 23 |
sac | 4.72e-12 | 23 |
liver | 8.83e-12 | 22 |
epithelial sac | 8.83e-12 | 22 |
digestive gland | 8.83e-12 | 22 |
epithelium of foregut-midgut junction | 8.83e-12 | 22 |
anatomical boundary | 8.83e-12 | 22 |
hepatobiliary system | 8.83e-12 | 22 |
foregut-midgut junction | 8.83e-12 | 22 |
hepatic diverticulum | 8.83e-12 | 22 |
liver primordium | 8.83e-12 | 22 |
septum transversum | 8.83e-12 | 22 |
liver bud | 8.83e-12 | 22 |
subdivision of trunk | 4.90e-11 | 66 |
trunk | 2.99e-10 | 90 |
epithelial tube | 1.10e-09 | 47 |
endoderm-derived structure | 1.57e-09 | 118 |
endoderm | 1.57e-09 | 118 |
presumptive endoderm | 1.57e-09 | 118 |
mesenchyme | 2.87e-09 | 61 |
entire embryonic mesenchyme | 2.87e-09 | 61 |
digestive system | 6.96e-09 | 116 |
digestive tract | 6.96e-09 | 116 |
primitive gut | 6.96e-09 | 116 |
subdivision of digestive tract | 1.32e-08 | 114 |
trunk region element | 2.12e-08 | 79 |
intestine | 1.01e-07 | 31 |
abdomen element | 1.66e-07 | 49 |
abdominal segment element | 1.66e-07 | 49 |
abdominal segment of trunk | 1.66e-07 | 49 |
abdomen | 1.66e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.