FFCP PHASE1:Hg19::chr8:19615435..19615446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24290|TSSclassifier=S|UniProt=E5RK93|association_with_transcript=2bp_to_ENST00000523262_5end|description=CAGE_peak_11_at_CSGALNACT1_5end|id=chr8:19615435..19615446,-|ontology_enrichment_celltype=CL:0002139!3.13e-11!24;CL:0000115!3.02e-09!35;CL:0005020!1.24e-07!6;CL:0002138!1.24e-07!6;CL:0005022!1.24e-07!6|ontology_enrichment_celltype_v019=CL:0002139;9.28e-14;24!CL:0000115;3.96e-10;36!CL:0002138;8.85e-10;6!CL:0002078;3.68e-08;45!CL:0002262;3.68e-08;2!CL:1000398;3.68e-08;2!CL:0000123;6.14e-08;2!CL:0002545;6.14e-08;2!CL:0000242;6.14e-08;2!CL:0000071;3.39e-07;18|ontology_enrichment_celltype_v019_2=CL:0002139,1.04e-13,24;CL:0000115,5.84e-13,36;CL:0002078,2.61e-10,45;CL:0005020,1.21e-09,6;CL:0002138,1.21e-09,6;CL:0005022,1.21e-09,6;CL:0002262,3.82e-08,2;CL:1000398,3.82e-08,2;CL:0002545,5.37e-08,2;CL:0000213,6.34e-08,58;CL:0000215,6.34e-08,58;CL:0000242,7.52e-08,2;CL:0000071,3.18e-07,18;CL:0002546,3.18e-07,18|ontology_enrichment_development_v019=CL:0005022;8.85e-10;6!CL:0002546;3.39e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.64e-17!115;UBERON:0000477!4.89e-13!286;UBERON:0001049!4.35e-09!57;UBERON:0005068!4.35e-09!57;UBERON:0006241!4.35e-09!57;UBERON:0007135!4.35e-09!57;UBERON:0004111!1.16e-08!241;UBERON:0001893!1.29e-08!34;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0002780!3.89e-08!41;UBERON:0001890!3.89e-08!41;UBERON:0006240!3.89e-08!41;UBERON:0002791!4.37e-08!33;UBERON:0003080!8.43e-08!42;UBERON:0002616!1.36e-07!59;UBERON:0002619!1.78e-07!22;UBERON:0000025!2.37e-07!194;UBERON:0001869!2.82e-07!32;UBERON:0001950!4.54e-07!20;UBERON:0000955!4.88e-07!69;UBERON:0006238!4.88e-07!69|ontology_enrichment_uberon_v019=UBERON:0001281;3.68e-08;2!UBERON:0003497;3.68e-08;2!UBERON:0003909;3.68e-08;2!UBERON:0003835;3.68e-08;2!UBERON:0001954;6.14e-08;2!UBERON:0005800;6.14e-08;2!UBERON:0003022;6.14e-08;2!UBERON:0001515;6.14e-08;2!UBERON:0002421;6.14e-08;2!UBERON:0002600;6.14e-08;2!UBERON:0001473;1.49e-07;8!UBERON:0004536;1.49e-07;8!UBERON:0006558;1.49e-07;8!UBERON:0004638;3.39e-07;18!UBERON:0001986;3.39e-07;18!UBERON:0004852;3.39e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.82e-08,2;UBERON:0003497,3.82e-08,2;UBERON:0003909,3.82e-08,2;UBERON:0003835,3.82e-08,2;UBERON:0001954,4.69e-08,2;UBERON:0003022,4.69e-08,2;UBERON:0002421,4.69e-08,2;UBERON:0002600,4.69e-08,2;UBERON:0005800,5.37e-08,2;UBERON:0001515,5.37e-08,2;UBERON:0001473,1.88e-07,8;UBERON:0004536,1.88e-07,8;UBERON:0006558,1.88e-07,8;UBERON:0004638,3.18e-07,18;UBERON:0001986,3.18e-07,18;UBERON:0004852,3.18e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.450530678524519,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.822405995998037,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,1.03366703667732,1.42306505074684,0.33472061276467,0.805658634218294,1.52054421143703,0.732186172644509,0.367663080345869,1.62028389576352,1.51809538082936,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0,0.196221465125346,0,2.95262181849859,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0.858840442033979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1882876015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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=S | |||
|UniProt=E5RK93 | |||
|association_with_transcript=2bp_to_ENST00000523262_5end | |||
|description=CAGE_peak_11_at_CSGALNACT1_5end | |||
|id=chr8:19615435..19615446,- | |||
|ontology_enrichment_celltype=CL:0002139!3.13e-11!24;CL:0000115!3.02e-09!35;CL:0005020!1.24e-07!6;CL:0002138!1.24e-07!6;CL:0005022!1.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.28e-14;24!CL:0000115;3.96e-10;36!CL:0002138;8.85e-10;6!CL:0002078;3.68e-08;45!CL:0002262;3.68e-08;2!CL:1000398;3.68e-08;2!CL:0000123;6.14e-08;2!CL:0002545;6.14e-08;2!CL:0000242;6.14e-08;2!CL:0000071;3.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.04e-13,24;CL:0000115,5.84e-13,36;CL:0002078,2.61e-10,45;CL:0005020,1.21e-09,6;CL:0002138,1.21e-09,6;CL:0005022,1.21e-09,6;CL:0002262,3.82e-08,2;CL:1000398,3.82e-08,2;CL:0002545,5.37e-08,2;CL:0000213,6.34e-08,58;CL:0000215,6.34e-08,58;CL:0000242,7.52e-08,2;CL:0000071,3.18e-07,18;CL:0002546,3.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;8.85e-10;6!CL:0002546;3.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.64e-17!115;UBERON:0000477!4.89e-13!286;UBERON:0001049!4.35e-09!57;UBERON:0005068!4.35e-09!57;UBERON:0006241!4.35e-09!57;UBERON:0007135!4.35e-09!57;UBERON:0004111!1.16e-08!241;UBERON:0001893!1.29e-08!34;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0002780!3.89e-08!41;UBERON:0001890!3.89e-08!41;UBERON:0006240!3.89e-08!41;UBERON:0002791!4.37e-08!33;UBERON:0003080!8.43e-08!42;UBERON:0002616!1.36e-07!59;UBERON:0002619!1.78e-07!22;UBERON:0000025!2.37e-07!194;UBERON:0001869!2.82e-07!32;UBERON:0001950!4.54e-07!20;UBERON:0000955!4.88e-07!69;UBERON:0006238!4.88e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.68e-08;2!UBERON:0003497;3.68e-08;2!UBERON:0003909;3.68e-08;2!UBERON:0003835;3.68e-08;2!UBERON:0001954;6.14e-08;2!UBERON:0005800;6.14e-08;2!UBERON:0003022;6.14e-08;2!UBERON:0001515;6.14e-08;2!UBERON:0002421;6.14e-08;2!UBERON:0002600;6.14e-08;2!UBERON:0001473;1.49e-07;8!UBERON:0004536;1.49e-07;8!UBERON:0006558;1.49e-07;8!UBERON:0004638;3.39e-07;18!UBERON:0001986;3.39e-07;18!UBERON:0004852;3.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.82e-08,2;UBERON:0003497,3.82e-08,2;UBERON:0003909,3.82e-08,2;UBERON:0003835,3.82e-08,2;UBERON:0001954,4.69e-08,2;UBERON:0003022,4.69e-08,2;UBERON:0002421,4.69e-08,2;UBERON:0002600,4.69e-08,2;UBERON:0005800,5.37e-08,2;UBERON:0001515,5.37e-08,2;UBERON:0001473,1.88e-07,8;UBERON:0004536,1.88e-07,8;UBERON:0006558,1.88e-07,8;UBERON:0004638,3.18e-07,18;UBERON:0001986,3.18e-07,18;UBERON:0004852,3.18e-07,18 | |||
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|short_description=p11@CSGALNACT1 | |||
}} |
Revision as of 04:28, 14 September 2013
Short description: | p11@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CSGALNACT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000523262_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | E5RK93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.04e-13 | 24 |
endothelial cell | 5.84e-13 | 36 |
meso-epithelial cell | 2.61e-10 | 45 |
lymphangioblast | 1.21e-09 | 6 |
endothelial cell of lymphatic vessel | 1.21e-09 | 6 |
vascular lymphangioblast | 1.21e-09 | 6 |
endothelial cell of sinusoid | 3.82e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.82e-08 | 2 |
thoracic aorta endothelial cell | 5.37e-08 | 2 |
lining cell | 6.34e-08 | 58 |
barrier cell | 6.34e-08 | 58 |
Merkel cell | 7.52e-08 | 2 |
blood vessel endothelial cell | 3.18e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.82e-08 | 2 |
abdomen blood vessel | 3.82e-08 | 2 |
sinusoid | 3.82e-08 | 2 |
abdominal segment blood vessel | 3.82e-08 | 2 |
Ammon's horn | 4.69e-08 | 2 |
lobe parts of cerebral cortex | 4.69e-08 | 2 |
hippocampal formation | 4.69e-08 | 2 |
limbic lobe | 4.69e-08 | 2 |
segment of aorta | 5.37e-08 | 2 |
thoracic aorta | 5.37e-08 | 2 |
lymphatic vessel | 1.88e-07 | 8 |
lymph vasculature | 1.88e-07 | 8 |
lymphatic part of lymphoid system | 1.88e-07 | 8 |
blood vessel endothelium | 3.18e-07 | 18 |
endothelium | 3.18e-07 | 18 |
cardiovascular system endothelium | 3.18e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.