FFCP PHASE1:Mm9::chr4:138375223..138375229,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18784|HGNC=|MCL_coexpression_id=16|UniProt=P97391,Q6GTW1|association_with_transcript=-51bp_to_ENSMUST00000136393,NM_011110,uc008vli.2_5end|description=CAGE_peak_12_at_Pla2g5_5end|id=chr4:138375223..138375229,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.54e-24!9;UBERON:0000019!3.54e-24!9;UBERON:0000047!3.54e-24!9;UBERON:0004088!3.54e-24!9;UBERON:0002104!3.54e-24!9;UBERON:0001456!3.54e-24!9;UBERON:0003072!3.54e-24!9;UBERON:0003071!3.54e-24!9;UBERON:0004128!3.54e-24!9;UBERON:0001444!1.17e-19!11;UBERON:0000020!5.84e-18!12;UBERON:0001032!5.84e-18!12;UBERON:0004456!5.84e-18!12;UBERON:0005085!1.60e-16!13;UBERON:0004176!3.40e-12!17;UBERON:0009196!3.40e-12!17;UBERON:0009117!3.40e-12!17;UBERON:0000991!1.78e-11!18;UBERON:0005564!1.78e-11!18;UBERON:0000473!3.39e-11!14;UBERON:0003135!2.03e-10!15;UBERON:0005156!5.20e-10!26;UBERON:0000990!5.20e-10!26;UBERON:0003101!9.77e-10!16;UBERON:0000079!9.77e-10!16;UBERON:0003133!2.04e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.91e-14,9;UBERON:0000019,4.91e-14,9;UBERON:0000047,4.91e-14,9;UBERON:0010312,4.91e-14,9;UBERON:0004088,4.91e-14,9;UBERON:0002104,4.91e-14,9;UBERON:0001456,4.91e-14,9;UBERON:0003072,4.91e-14,9;UBERON:0004128,4.91e-14,9;UBERON:0003071,4.91e-14,9;UBERON:0001444,1.07e-11,11;UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3;UBERON:0000020,8.07e-11,12;UBERON:0001032,8.07e-11,12;UBERON:0004456,8.07e-11,12;UBERON:0000033,4.49e-10,13;UBERON:0005085,4.49e-10,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73574412652416,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.187403449119458,9.05461797586555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Pla2g5}} | ||
|EntrezGene=18784 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt=P97391,Q6GTW1 | |||
|association_with_transcript=-51bp_to_ENSMUST00000136393,NM_011110,uc008vli.2_5end | |||
|description=CAGE_peak_12_at_Pla2g5_5end | |||
|id=chr4:138375223..138375229,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.54e-24!9;UBERON:0000019!3.54e-24!9;UBERON:0000047!3.54e-24!9;UBERON:0004088!3.54e-24!9;UBERON:0002104!3.54e-24!9;UBERON:0001456!3.54e-24!9;UBERON:0003072!3.54e-24!9;UBERON:0003071!3.54e-24!9;UBERON:0004128!3.54e-24!9;UBERON:0001444!1.17e-19!11;UBERON:0000020!5.84e-18!12;UBERON:0001032!5.84e-18!12;UBERON:0004456!5.84e-18!12;UBERON:0005085!1.60e-16!13;UBERON:0004176!3.40e-12!17;UBERON:0009196!3.40e-12!17;UBERON:0009117!3.40e-12!17;UBERON:0000991!1.78e-11!18;UBERON:0005564!1.78e-11!18;UBERON:0000473!3.39e-11!14;UBERON:0003135!2.03e-10!15;UBERON:0005156!5.20e-10!26;UBERON:0000990!5.20e-10!26;UBERON:0003101!9.77e-10!16;UBERON:0000079!9.77e-10!16;UBERON:0003133!2.04e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.91e-14,9;UBERON:0000019,4.91e-14,9;UBERON:0000047,4.91e-14,9;UBERON:0010312,4.91e-14,9;UBERON:0004088,4.91e-14,9;UBERON:0002104,4.91e-14,9;UBERON:0001456,4.91e-14,9;UBERON:0003072,4.91e-14,9;UBERON:0004128,4.91e-14,9;UBERON:0003071,4.91e-14,9;UBERON:0001444,1.07e-11,11;UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3;UBERON:0000020,8.07e-11,12;UBERON:0001032,8.07e-11,12;UBERON:0004456,8.07e-11,12;UBERON:0000033,4.49e-10,13;UBERON:0005085,4.49e-10,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73574412652416,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.187403449119458,9.05461797586555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Pla2g5 | |||
}} |
Revision as of 04:15, 14 September 2013
Short description: | p12@Pla2g5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Pla2g5_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -51bp_to_ENSMUST00000136393, NM_011110, uc008vli.2_5end |
EntrezGene: | Pla2g5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 4.91e-14 | 9 |
camera-type eye | 4.91e-14 | 9 |
simple eye | 4.91e-14 | 9 |
immature eye | 4.91e-14 | 9 |
ocular region | 4.91e-14 | 9 |
visual system | 4.91e-14 | 9 |
face | 4.91e-14 | 9 |
optic cup | 4.91e-14 | 9 |
optic vesicle | 4.91e-14 | 9 |
eye primordium | 4.91e-14 | 9 |
subdivision of head | 1.07e-11 | 11 |
raphe nuclei | 7.15e-11 | 3 |
reticular formation | 7.15e-11 | 3 |
sense organ | 8.07e-11 | 12 |
sensory system | 8.07e-11 | 12 |
entire sense organ system | 8.07e-11 | 12 |
head | 4.49e-10 | 13 |
ectodermal placode | 4.49e-10 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.