FFCP PHASE1:Hg19::chr8:128306960..128306989,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4726 | |||
|description=CAGE_peak_at_chr8:128306960..128306989,- | |||
|id=chr8:128306960..128306989,- | |||
|ontology_enrichment_celltype=CL:0000066!8.75e-48!254;CL:0000220!1.12e-27!246;CL:0002321!5.49e-27!248;CL:0002076!2.99e-20!43;CL:0000548!3.28e-16!679;CL:0000004!3.28e-16!679;CL:0000255!3.28e-16!679;CL:0000012!1.12e-15!682;CL:0000222!2.04e-15!119;CL:0000223!3.83e-15!59;CL:0000076!5.95e-14!62;CL:0000680!4.74e-11!57;CL:0000056!4.74e-11!57;CL:0000355!4.74e-11!57;CL:0000183!1.19e-10!59;CL:0000187!2.96e-10!54;CL:0000192!6.36e-10!42;CL:0000514!6.36e-10!42;CL:0000003!1.66e-09!722;CL:0002251!5.26e-09!21;CL:0000393!8.91e-09!60;CL:0000211!8.91e-09!60;CL:0002139!1.30e-08!24;CL:0000359!2.68e-08!32;CL:0002368!1.33e-07!13;CL:1000497!2.26e-07!18;CL:0002518!2.26e-07!18;CL:1000449!3.77e-07!16;CL:0000115!4.36e-07!35;CL:0000071!7.69e-07!18;CL:0002546!7.69e-07!18;CL:1000507!8.61e-07!12;CL:1000494!8.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.88e-14;42!CL:0002202;6.29e-09;9!CL:0002632;6.29e-09;9!CL:0000076;3.71e-08;63!CL:0002368;4.41e-08;13!CL:0002251;6.13e-08;20!CL:0002149;1.42e-07;6!CL:0002255;1.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-52,253;CL:0002321,1.51e-25,250;CL:0002076,1.20e-20,42;CL:0000223,1.18e-16,58;CL:0000076,1.90e-15,63;CL:0000222,5.20e-12,121;CL:0002202,8.99e-09,9;CL:0002632,8.99e-09,9;CL:0002251,3.65e-08,20;CL:0002368,6.69e-08,13;CL:0002149,1.05e-07,6;CL:0002255,1.05e-07,6;CL:0000680,1.23e-07,58;CL:0000056,1.23e-07,58;CL:0000355,1.23e-07,58;CL:0000187,3.85e-07,55;CL:0002139,6.46e-07,24;CL:0000192,6.77e-07,43;CL:0000514,6.77e-07,43;CL:0000115,9.48e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000223;9.30e-09;58 | |||
|ontology_enrichment_disease=DOID:305!3.62e-18!106;DOID:0050687!2.82e-11!143;DOID:1749!3.68e-10!14;DOID:299!5.72e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.28e-13;14!DOID:299;7.12e-12;25!DOID:3001;1.42e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.79e-22,106;DOID:0050687,3.07e-14,143;DOID:1749,8.16e-14,14;DOID:299,5.87e-12,25;DOID:3001,1.05e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.47e-18!238;UBERON:0009142!1.47e-18!238;UBERON:0000481!1.04e-14!347;UBERON:0000490!1.04e-14!138;UBERON:0000119!9.28e-14!312;UBERON:0002049!1.96e-13!79;UBERON:0007798!1.96e-13!79;UBERON:0000483!5.22e-13!309;UBERON:0004119!5.35e-13!169;UBERON:0000925!5.35e-13!169;UBERON:0006595!5.35e-13!169;UBERON:0002100!6.81e-13!216;UBERON:0003914!6.98e-13!118;UBERON:0000055!1.22e-12!69;UBERON:0000464!2.88e-12!104;UBERON:0001981!1.27e-11!60;UBERON:0007500!1.27e-11!60;UBERON:0004537!1.27e-11!60;UBERON:0006965!1.27e-11!60;UBERON:0001004!1.65e-11!72;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000486!6.81e-11!82;UBERON:0000065!2.23e-10!53;UBERON:0000467!2.34e-10!625;UBERON:0000480!3.27e-10!626;UBERON:0000072!3.72e-10!46;UBERON:0008947!3.91e-10!38;UBERON:0003258!3.91e-10!38;UBERON:0005256!3.97e-10!143;UBERON:0000477!4.76e-10!286;UBERON:0000466!9.20e-10!126;UBERON:0004111!1.09e-09!241;UBERON:0001007!1.10e-09!155;UBERON:0001555!1.10e-09!155;UBERON:0007026!1.10e-09!155;UBERON:0000077!1.51e-09!130;UBERON:0004573!2.27e-09!33;UBERON:0004571!2.27e-09!33;UBERON:0001134!2.50e-09!61;UBERON:0002036!2.50e-09!61;UBERON:0003082!2.50e-09!61;UBERON:0000468!3.11e-09!659;UBERON:0000923!3.86e-09!604;UBERON:0005291!3.86e-09!604;UBERON:0006598!3.86e-09!604;UBERON:0002532!3.86e-09!604;UBERON:0000475!4.06e-09!365;UBERON:0004921!4.42e-09!129;UBERON:0004185!4.42e-09!129;UBERON:0000926!5.11e-09!448;UBERON:0004120!5.11e-09!448;UBERON:0006603!5.11e-09!448;UBERON:0002385!5.18e-09!63;UBERON:0001015!5.18e-09!63;UBERON:0000383!5.18e-09!63;UBERON:0002050!5.26e-09!605;UBERON:0005423!5.26e-09!605;UBERON:0001041!5.56e-09!98;UBERON:0004290!7.38e-09!70;UBERON:0004872!9.76e-09!84;UBERON:0007196!1.04e-08!14;UBERON:0001558!1.04e-08!14;UBERON:0005178!1.05e-08!34;UBERON:0002224!1.05e-08!34;UBERON:0000922!2.33e-08!612;UBERON:0005181!3.58e-08!35;UBERON:0000063!6.29e-08!97;UBERON:0000487!1.04e-07!22;UBERON:0000914!1.10e-07!83;UBERON:0002329!1.10e-07!83;UBERON:0003077!1.10e-07!83;UBERON:0003059!1.10e-07!83;UBERON:0007282!1.10e-07!83;UBERON:0009618!1.10e-07!83;UBERON:0007285!1.10e-07!83;UBERON:0000915!1.47e-07!52;UBERON:0001048!1.52e-07!168;UBERON:0004535!2.12e-07!110;UBERON:0004211!3.77e-07!16;UBERON:0001285!3.77e-07!16;UBERON:0007684!3.77e-07!16;UBERON:0003220!3.77e-07!16;UBERON:0004208!3.77e-07!16;UBERON:0000064!4.12e-07!219;UBERON:0001009!5.07e-07!113;UBERON:0001986!7.69e-07!18;UBERON:0004638!7.69e-07!18;UBERON:0004852!7.69e-07!18;UBERON:0009773!8.61e-07!12;UBERON:0001231!8.61e-07!12;UBERON:0004810!8.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;9.54e-12;37!UBERON:0007196;5.33e-10;15!UBERON:0001558;5.33e-10;15!UBERON:0000065;1.68e-09;44!UBERON:0005178;6.66e-08;34!UBERON:0002224;6.66e-08;34!UBERON:0003914;8.56e-08;74!UBERON:0005181;1.97e-07;35!UBERON:0005911;2.11e-07;36!UBERON:0000490;3.53e-07;33!UBERON:0000487;3.93e-07;22!UBERON:0001737;4.65e-07;9!UBERON:0001557;4.65e-07;9!UBERON:0001004;7.39e-07;65!UBERON:0000995;7.52e-07;17!UBERON:0004573;8.89e-07;33!UBERON:0004571;8.89e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.09e-13,309;UBERON:0008947,1.29e-12,38;UBERON:0003258,1.29e-12,38;UBERON:0000483,1.33e-12,306;UBERON:0000072,1.04e-11,47;UBERON:0000065,1.19e-10,54;UBERON:0001004,2.29e-10,74;UBERON:0003914,6.69e-10,117;UBERON:0002049,7.43e-10,78;UBERON:0007798,7.43e-10,78;UBERON:0000490,8.49e-10,148;UBERON:0007196,9.19e-10,15;UBERON:0001558,9.19e-10,15;UBERON:0000055,2.81e-09,68;UBERON:0007500,3.95e-09,59;UBERON:0001981,3.95e-09,59;UBERON:0004537,3.95e-09,59;UBERON:0006965,3.95e-09,59;UBERON:0004119,5.32e-09,160;UBERON:0000925,5.32e-09,160;UBERON:0006595,5.32e-09,160;UBERON:0001637,1.21e-08,42;UBERON:0003509,1.21e-08,42;UBERON:0004572,1.21e-08,42;UBERON:0005178,1.29e-08,34;UBERON:0002224,1.29e-08,34;UBERON:0002100,1.63e-08,199;UBERON:0001041,1.94e-08,87;UBERON:0005181,3.42e-08,35;UBERON:0000486,4.19e-08,83;UBERON:0001048,9.19e-08,160;UBERON:0004573,1.18e-07,33;UBERON:0004571,1.18e-07,33;UBERON:0000487,2.14e-07,22;UBERON:0001737,2.35e-07,9;UBERON:0005423,3.05e-07,581 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,2.00146596706261,0,1.74467704820074,0,0,0,3.93174298402414,6.28021051175185,1.31064823278103,1.58260186937072,0.495065411840187,2.98257638155124,2.01697543935533,3.61616716814386,5.11217063271161,2.43966399395253,0.738726348460727,1.02000345622126,0.940364164434263,3.14859585844162,1.50561867580173,1.63205431473244,0,0,0,0,0,0.154816123316076,3.67768489791571,1.50602959389125,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.70162670895322,1.77383517970051,1.14185221401064,0,3.27865759463288,1.48313777113772,0,0,0,0,0,0,2.18638648103376,0.860234595106124,1.73570250803797,1.69592382577203,3.35599548967925,2.47606237746061,0.835979866147242,1.55050055501597,1.42306505074684,0.33472061276467,3.62546385398232,9.12326526862215,5.36936526605973,0.735326160691737,2.43042584364528,1.7859945656816,0.673588117878509,1.46394924628319,0,0,1.83201743930407,0,0,2.61656431285521,0,0.633152558322899,1.05927344650575,0,0,0,1.06748995729705,0.24666754841716,0.933633106199299,2.69421344139376,1.30769522490767,0.908144565869588,0,0.234321431833797,0.624320153660641,1.1409436430889,0,0.704606991862589,0,0.421352420106746,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,1.36118619792025,0,0.213557388818567,0,0,0.103052529238439,0,0,0.337552664482532,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0,0,1.73934767846967,0.272746120590835,1.72082757233402,0,0,0,0,0,0,0,0,1.38134921352481,6.03678306441573,11.5500717067134,2.9576700009961,1.68584690078102,1.44606617930089,4.52205288202815,1.96091499683166,1.18635309555548,3.37078270400411,1.56977172100277,1.53898862778556,0.738155454624648,2.80483547606892,0,0,0,0,0,0,1.8448265781467,2.57351715447788,0.439001141634502,2.24803506515239,1.00528972411631,3.05541869023148,0,0,4.3299402607582,0.34779121492523,0.234817388471643,2.30986316417718,1.38895653772983,0.951270761172991,0,0,0,0,0,1.87467667973554,1.17587489739202,1.13420077793909,3.67189943081678,2.61570544662566,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0.87192013766656,2.0534720029866,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,2.46128221334885,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,1.89885516589815,0,0.178428988797162,0.157702415033935,0,0.601892199455438,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,1.66435439510497,1.20956117331872,0.496215615637554,0,0.561320188866147,0,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.657017248110473,2.07701771673448,0.813472649219715,0.241718899183244,1.60405176242628,4.8802924136025,0,0.546273504020151,0.131124414959424,3.15839729035188,3.38867483259425,3.92174884588428,2.92278449306521,0.844413031143006,1.13733384070897,2.55140557914773,1.0795795805107,0,0.541892875087706,0.501689773854853,3.3133915495855,2.49322802678617,2.91037181138832,0,0,3.84675187674584,2.62411716559765,0.650756789328606,0,0,0,1.14853107599234,1.30012049207304,0,0,1.54048617114644,2.30255512089194,4.13509717453592,0.966782203814463,1.59518363305651,1.70453254832202,0.178064071293475,1.4875642382488,0.768760269460425,2.04180339991335,0.6069466851333,1.85938219718914,0.62962469366128,0,0.308033580176089,1.59691809095107,2.60979897622522,2.7798632865588,2.86249773483982,1.116475108079,0,0.571890581771475,4.35026245229268,0.855877976067841,0,1.56989728039846,0.899362287916574,0.54907405947211,0,1.81964233415984,14.2659289055707,1.26377536871694,2.43816869544795,1.46228093778771,2.11300293513511,0.136499911407986,0,0,0.551365343546124,0.66343897524122,1.31535265576129,5.20897980840019,2.62357900818653,2.02910376962704,0.92947049429925,0.563391205064483,0.143411352204052,0.196498082026242,1.426684205925,1.06428319221179,0,0,0,0,4.13755084719702,2.01090682660736,2.17781969722645,0,2.15252686335615,1.68471475667626,3.10401107475673,1.83778720165568,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86565405061372,0,0,0,5.68272293612826,1.19372242368845,0,3.37876772309155,0,0.140669416410513,2.67140892054974,0,16.2566564258555,0.398495976502139,0.276283915531148,0,0,0,0,14.019462778983,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.82069517256799,1.27126825146383,1.18193840883968,0,0,0,0,0,0,0,0,0,1.41620002574687,0.557694977114413,0.153900517007594,0,0,0,0,1.27600463892768,0.0915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,4.00896322603251,43.4199269703333,0.424059214301822,0.432777279484182,0,0.0884575645033392,0,0,0,0,0,0,0,0,13.6965233252463,4.85560759068186,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0,1.19472429772959,1.70765727617876,5.68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| |||
|short_description=p@chr8:128306960..128306989,- | |||
}} |
Revision as of 03:34, 14 September 2013
Short description: | p@chr8:128306960..128306989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:128306960..128306989, - |
Coexpression cluster: | C4726_clear_oral_giant_anaplastic_ductal_squamous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-52 | 253 |
embryonic cell | 1.51e-25 | 250 |
endo-epithelial cell | 1.20e-20 | 42 |
endodermal cell | 1.18e-16 | 58 |
squamous epithelial cell | 1.90e-15 | 63 |
mesodermal cell | 5.20e-12 | 121 |
epithelial cell of tracheobronchial tree | 8.99e-09 | 9 |
epithelial cell of lower respiratory tract | 8.99e-09 | 9 |
epithelial cell of alimentary canal | 3.65e-08 | 20 |
respiratory epithelial cell | 6.69e-08 | 13 |
epithelial cell of uterus | 1.05e-07 | 6 |
stromal cell of endometrium | 1.05e-07 | 6 |
muscle precursor cell | 1.23e-07 | 58 |
myoblast | 1.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-07 | 58 |
muscle cell | 3.85e-07 | 55 |
endothelial cell of vascular tree | 6.46e-07 | 24 |
smooth muscle cell | 6.77e-07 | 43 |
smooth muscle myoblast | 6.77e-07 | 43 |
endothelial cell | 9.48e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.79e-22 | 106 |
cell type cancer | 3.07e-14 | 143 |
squamous cell carcinoma | 8.16e-14 | 14 |
adenocarcinoma | 5.87e-12 | 25 |
female reproductive endometrioid cancer | 1.05e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.