FFCP PHASE1:Hg19::chr8:122653259..122653278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=34340|TSSclassifier=W|UniProt=|association_with_transcript=-397bp_to_ENST00000520043_5end|coexpression_cluster_id=C2007|description=CAGE_peak_4_at_HAS2-AS1_5end|id=chr8:122653259..122653278,+|ontology_enrichment_celltype=CL:0000055!3.24e-20!180;CL:0002620!2.93e-19!23;CL:0000057!1.26e-15!75;CL:0000515!9.24e-10!4;CL:0000048!7.31e-09!430;CL:0000723!1.68e-08!436;CL:0000034!4.91e-08!444;CL:0000188!1.30e-07!9|ontology_enrichment_celltype_v019=CL:0000056;1.03e-44;4!CL:0002582;1.95e-27;3!CL:0000515;3.56e-27;3!CL:0000680;6.29e-26;7!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0002321;1.71e-12;15!CL:0002334;1.35e-07;12|ontology_enrichment_celltype_v019_2=CL:0000515,6.58e-45,4;CL:0002582,3.11e-27,3;CL:0000228,5.16e-21,1;CL:0002372,5.16e-21,1;CL:0002334,1.52e-07,12|ontology_enrichment_development_v019=CL:0000515;1.03e-44;4|ontology_enrichment_disease=DOID:17!5.04e-10!5;DOID:450!5.04e-10!5;DOID:66!5.04e-10!5;DOID:423!5.04e-10!5;DOID:0080000!5.04e-10!5;DOID:11722!5.04e-10!5|ontology_enrichment_disease_v019=DOID:2513;5.16e-21;1!DOID:3451;3.34e-11;2!DOID:4159;3.34e-11;2!DOID:0060122;3.34e-11;2|ontology_enrichment_disease_v019_2=DOID:2513,2.82e-21,1;DOID:3451,2.47e-11,2;DOID:4159,2.47e-11,2;DOID:0060122,2.47e-11,2|ontology_enrichment_uberon=UBERON:0002199!5.24e-12!45;UBERON:0002416!5.24e-12!45;UBERON:0002097!7.79e-11!40;UBERON:0003102!4.35e-07!95;UBERON:0000914!7.73e-07!83;UBERON:0002329!7.73e-07!83;UBERON:0003077!7.73e-07!83;UBERON:0003059!7.73e-07!83;UBERON:0007282!7.73e-07!83;UBERON:0009618!7.73e-07!83;UBERON:0007285!7.73e-07!83|ontology_enrichment_uberon_v019=UBERON:0001134;9.39e-12;16!UBERON:0002036;9.39e-12;16|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0.323745888736263,0.702254033511242,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,1.22595118319608,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,2.86919764810153,0.389748020644795,0.504867548488229,0.368199594569197,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,1.44781306667579,0.205476322550383,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0.160853921143607,0,0.771048469013278,0.532685175939381,1.06765302817952,0,2.32420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.308097234229289,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,4.60047658820639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.895528817321244,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0.813741466409323,0.909243296012797,0,0,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@HAS2-AS1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34340 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-397bp_to_ENST00000520043_5end | |||
|coexpression_cluster_id=C2007 | |||
|description=CAGE_peak_4_at_HAS2-AS1_5end | |||
|id=chr8:122653259..122653278,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.24e-20!180;CL:0002620!2.93e-19!23;CL:0000057!1.26e-15!75;CL:0000515!9.24e-10!4;CL:0000048!7.31e-09!430;CL:0000723!1.68e-08!436;CL:0000034!4.91e-08!444;CL:0000188!1.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.03e-44;4!CL:0002582;1.95e-27;3!CL:0000515;3.56e-27;3!CL:0000680;6.29e-26;7!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0002321;1.71e-12;15!CL:0002334;1.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,6.58e-45,4;CL:0002582,3.11e-27,3;CL:0000228,5.16e-21,1;CL:0002372,5.16e-21,1;CL:0002334,1.52e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000515;1.03e-44;4 | |||
|ontology_enrichment_disease=DOID:17!5.04e-10!5;DOID:450!5.04e-10!5;DOID:66!5.04e-10!5;DOID:423!5.04e-10!5;DOID:0080000!5.04e-10!5;DOID:11722!5.04e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;5.16e-21;1!DOID:3451;3.34e-11;2!DOID:4159;3.34e-11;2!DOID:0060122;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.82e-21,1;DOID:3451,2.47e-11,2;DOID:4159,2.47e-11,2;DOID:0060122,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.24e-12!45;UBERON:0002416!5.24e-12!45;UBERON:0002097!7.79e-11!40;UBERON:0003102!4.35e-07!95;UBERON:0000914!7.73e-07!83;UBERON:0002329!7.73e-07!83;UBERON:0003077!7.73e-07!83;UBERON:0003059!7.73e-07!83;UBERON:0007282!7.73e-07!83;UBERON:0009618!7.73e-07!83;UBERON:0007285!7.73e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.39e-12;16!UBERON:0002036;9.39e-12;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0.323745888736263,0.702254033511242,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,1.22595118319608,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,2.86919764810153,0.389748020644795,0.504867548488229,0.368199594569197,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,1.44781306667579,0.205476322550383,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0.160853921143607,0,0.771048469013278,0.532685175939381,1.06765302817952,0,2.32420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.308097234229289,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,4.60047658820639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.895528817321244,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0.813741466409323,0.909243296012797,0,0,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@HAS2-AS1 | |||
}} |
Revision as of 03:21, 14 September 2013
Short description: | p4@HAS2-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HAS2-AS1_5end |
Coexpression cluster: | C2007_liposarcoma_Fibroblast_Myoblast_Preadipocyte_mesenchymal_basal_Smooth |
Association with transcript: | -397bp_to_ENST00000520043_5end |
EntrezGene: | NA |
HGNC: | 34340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 6.58e-45 | 4 |
visceral preadipocyte | 3.11e-27 | 3 |
multinucleate cell | 5.16e-21 | 1 |
myotube | 5.16e-21 | 1 |
preadipocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.82e-21 | 1 |
skin carcinoma | 2.47e-11 | 2 |
skin cancer | 2.47e-11 | 2 |
integumentary system cancer | 2.47e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.