FFCP PHASE1:Mm9::chr4:106851265..106851276,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56374|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141013_5end|description=CAGE_peak_2_at_Tmem59_5end|id=chr4:106851265..106851276,+|ontology_enrichment_celltype=CL:0000066!2.93e-10!25;CL:0000223!2.84e-07!20;CL:0002076!2.95e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-10,25;CL:0000223,2.84e-07,20;CL:0002076,2.95e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.03e-09!15;UBERON:0000160!4.60e-08!43;UBERON:0001242!6.03e-08!13;UBERON:0000060!6.03e-08!13;UBERON:0001262!6.03e-08!13;UBERON:0004786!6.03e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.02e-09,15;UBERON:0001242,6.01e-08,13;UBERON:0001262,6.01e-08,13;UBERON:0004786,6.01e-08,13;UBERON:0000160,2.47e-07,31|phase1_expression=17.7765220286321,22.6834014965585,28.6649520815408,12.40103266358,13.023288978605,17.2915650069246,10.2789561862031,2.84071311571468,0.84473233291,0.468129052643987,0.171217968225505,0.638177271962691,2.05440875917447,1.83582845079895,0.666219523631325,3.03712901084739,4.19737126876888,1.26184866143295,1.64537320326887,2.54633791078818,9.77997836737302,5.16312946244604,3.91799683708403,15.5192650109604,20.8762445771125,32.7312219545562,21.5380998079537,23.7018355954478,21.852693237483,25.2030129759931,22.6165120868411,0,0,0,10.6875099307972,9.64160943079256,8.5751129630195,7.95210098400125,8.5946887897618,10.470474879476,8.82347232046521,8.87959130445979,7.2826552954673,5.5394599909254,6.79225439170748,6.24058957349717,1.56478268869608,1.30815093828268,9.00713349211335,1.74986909166855,0.139986421625363,2.87505128729943,2.01339127269284,1.45072428402269,1.00828139742739,11.5766746216176,13.1805382371828,10.8291139378263,4.24864567805155,4.7609188134483,2.53532561402472,5.42151251310611,4.4464739805557,6.74924787961049,3.9554654502679,7.8152812644071,6.5912024314049,6.91592949578798,3.21437798156281,3.10513658162888,3.57552434297349,9.99778445413313,10.3808214247258,2.20483438586917,1.0543001812006,0,6.60695285996332,15.7055425844781,16.7431121249305,1.84640802822271,1.82975287204819,6.77187381723788,20.9387249251036,13.5063026407603,13.9046405476897,5.59794312399969,7.11858403995515,4.47358669980721,12.6462742866417,11.7135918165518,4.92769630792852,12.0459342777394,6.79971333707751,14.5719861742211,6.49776417447669,5.82434953226536,5.47733238513832,6.64678258054425,5.97507810586598,7.42013106471715,19.5772353489586,25.6652954828636,25.4805239706646,35.5533351576666,6.49473123033642,7.09407623330276,6.57181778519218,14.9580882431969,2.07150306917737,9.64873903921361,6.24547176358089,7.00270600117925,9.4552353874984,12.3592565253151,10.9357497636205,14.4516580029127,9.64060374164058,4.62717942143717,1.76922110389975,5.66183974815932,5.74187947997023,3.39412677194655,0,2.92780797011547,10.6817820474862,10.4737392635522,5.87094110079009,0,8.13249453267614,8.98743836428936,1.83000241127451,4.77486538028885,5.9100268865374,8.43861009190091,6.44142938134636,6.48965052271031,9.06370338267815,7.2156042953854,10.108910337347,7.78634866779954,2.60240885925407,2.98872735763515,1.98068342785884,4.67184935290717,7.21186891004075,4.35586648968489,8.05834831213668,4.39795730256327,1.29340795759705,1.70195472151037,1.58356011747554,2.19195732427575,2.78047249225598,3.48252166522167,5.14455341019859,4.57778813682534,0,0.51469581422943,4.83077948972507,1.44988040774851,2.81431271977315,3.24111710629827,1.89395788468168,2.16440654922144,3.39387648352232,3.0229412817553,3.75582761959467,6.77238985729583,3.45575684818309,4.59668899421467,4.13450928683864,5.26319954731196,3.07370161407471,3.48936688776967,7.99101804543684,4.42489833230923,19.8251269790279,4.23120906661671,2.34617075588757,2.55460339046482,2.31961430379768,3.02525286935014,2.89091456998331,8.3699275489526,12.8122846617018,13.1759163779209,13.069430857614,18.7019083718682,14.4273424468149,6.29173586057955,17.2910439899755,19.9141273254367,3.41402221715547,4.45569199177942,1.1270773567308,4.07302655690629,5.04276466635827,8.76697748628982,12.2678882021059,10.4803205065518,11.9319033159445,13.9438795231635,10.3758419480502,1.33476084572875,1.76903095601883,1.12431056192427,1.42002084971952,2.41177159752417,2.29163266603278,1.72617682470486,6.64754429777645,5.76578967694971,1.43768206527355,11.1642284300551,5.92871578917665,6.56705082662491,6.27890947326693,10.1313139486307,4.98833613449833,3.97931964718018,1.14075483509418,1.69745085775188,4.45911471748154,3.51763140627813,2.14239276797412,7.41507861859636,4.57141917907954,6.2010113101657,6.69710028361446,5.24362607090362,7.25276923836761,9.25753974921674,4.52373851817817,5.98296252200581,6.39293554924747,8.00216564283724,12.8440471990234,14.417037450841,5.90165803356032,6.5642441073137,2.2085575359138,1.95219372148319,3.01592756825919,2.38968797952552,3.7875774594007,1.98153571552183,1.21443210502468,2.33804686329049,1.18586333383957,2.24924921495265,3.83238230062325,9.08134578703002,9.44744364250741,2.96946221350564,5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| ||
|EntrezGene=56374 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141013_5end | |||
|description=CAGE_peak_2_at_Tmem59_5end | |||
|id=chr4:106851265..106851276,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.93e-10!25;CL:0000223!2.84e-07!20;CL:0002076!2.95e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-10,25;CL:0000223,2.84e-07,20;CL:0002076,2.95e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.03e-09!15;UBERON:0000160!4.60e-08!43;UBERON:0001242!6.03e-08!13;UBERON:0000060!6.03e-08!13;UBERON:0001262!6.03e-08!13;UBERON:0004786!6.03e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.02e-09,15;UBERON:0001242,6.01e-08,13;UBERON:0001262,6.01e-08,13;UBERON:0004786,6.01e-08,13;UBERON:0000160,2.47e-07,31 | |||
|phase1_expression=17.7765220286321,22.6834014965585,28.6649520815408,12.40103266358,13.023288978605,17.2915650069246,10.2789561862031,2.84071311571468,0.84473233291,0.468129052643987,0.171217968225505,0.638177271962691,2.05440875917447,1.83582845079895,0.666219523631325,3.03712901084739,4.19737126876888,1.26184866143295,1.64537320326887,2.54633791078818,9.77997836737302,5.16312946244604,3.91799683708403,15.5192650109604,20.8762445771125,32.7312219545562,21.5380998079537,23.7018355954478,21.852693237483,25.2030129759931,22.6165120868411,0,0,0,10.6875099307972,9.64160943079256,8.5751129630195,7.95210098400125,8.5946887897618,10.470474879476,8.82347232046521,8.87959130445979,7.2826552954673,5.5394599909254,6.79225439170748,6.24058957349717,1.56478268869608,1.30815093828268,9.00713349211335,1.74986909166855,0.139986421625363,2.87505128729943,2.01339127269284,1.45072428402269,1.00828139742739,11.5766746216176,13.1805382371828,10.8291139378263,4.24864567805155,4.7609188134483,2.53532561402472,5.42151251310611,4.4464739805557,6.74924787961049,3.9554654502679,7.8152812644071,6.5912024314049,6.91592949578798,3.21437798156281,3.10513658162888,3.57552434297349,9.99778445413313,10.3808214247258,2.20483438586917,1.0543001812006,0,6.60695285996332,15.7055425844781,16.7431121249305,1.84640802822271,1.82975287204819,6.77187381723788,20.9387249251036,13.5063026407603,13.9046405476897,5.59794312399969,7.11858403995515,4.47358669980721,12.6462742866417,11.7135918165518,4.92769630792852,12.0459342777394,6.79971333707751,14.5719861742211,6.49776417447669,5.82434953226536,5.47733238513832,6.64678258054425,5.97507810586598,7.42013106471715,19.5772353489586,25.6652954828636,25.4805239706646,35.5533351576666,6.49473123033642,7.09407623330276,6.57181778519218,14.9580882431969,2.07150306917737,9.64873903921361,6.24547176358089,7.00270600117925,9.4552353874984,12.3592565253151,10.9357497636205,14.4516580029127,9.64060374164058,4.62717942143717,1.76922110389975,5.66183974815932,5.74187947997023,3.39412677194655,0,2.92780797011547,10.6817820474862,10.4737392635522,5.87094110079009,0,8.13249453267614,8.98743836428936,1.83000241127451,4.77486538028885,5.9100268865374,8.43861009190091,6.44142938134636,6.48965052271031,9.06370338267815,7.2156042953854,10.108910337347,7.78634866779954,2.60240885925407,2.98872735763515,1.98068342785884,4.67184935290717,7.21186891004075,4.35586648968489,8.05834831213668,4.39795730256327,1.29340795759705,1.70195472151037,1.58356011747554,2.19195732427575,2.78047249225598,3.48252166522167,5.14455341019859,4.57778813682534,0,0.51469581422943,4.83077948972507,1.44988040774851,2.81431271977315,3.24111710629827,1.89395788468168,2.16440654922144,3.39387648352232,3.0229412817553,3.75582761959467,6.77238985729583,3.45575684818309,4.59668899421467,4.13450928683864,5.26319954731196,3.07370161407471,3.48936688776967,7.99101804543684,4.42489833230923,19.8251269790279,4.23120906661671,2.34617075588757,2.55460339046482,2.31961430379768,3.02525286935014,2.89091456998331,8.3699275489526,12.8122846617018,13.1759163779209,13.069430857614,18.7019083718682,14.4273424468149,6.29173586057955,17.2910439899755,19.9141273254367,3.41402221715547,4.45569199177942,1.1270773567308,4.07302655690629,5.04276466635827,8.76697748628982,12.2678882021059,10.4803205065518,11.9319033159445,13.9438795231635,10.3758419480502,1.33476084572875,1.76903095601883,1.12431056192427,1.42002084971952,2.41177159752417,2.29163266603278,1.72617682470486,6.64754429777645,5.76578967694971,1.43768206527355,11.1642284300551,5.92871578917665,6.56705082662491,6.27890947326693,10.1313139486307,4.98833613449833,3.97931964718018,1.14075483509418,1.69745085775188,4.45911471748154,3.51763140627813,2.14239276797412,7.41507861859636,4.57141917907954,6.2010113101657,6.69710028361446,5.24362607090362,7.25276923836761,9.25753974921674,4.52373851817817,5.98296252200581,6.39293554924747,8.00216564283724,12.8440471990234,14.417037450841,5.90165803356032,6.5642441073137,2.2085575359138,1.95219372148319,3.01592756825919,2.38968797952552,3.7875774594007,1.98153571552183,1.21443210502468,2.33804686329049,1.18586333383957,2.24924921495265,3.83238230062325,9.08134578703002,9.44744364250741,2.96946221350564,5.30980553359851,3.39892890616974,6.65111825322452,7.92141334974772,4.13422650033082,4.91896236710284,10.5955600198971,7.99774204850512,6.77345018930971,8.84902922220285,7.37930260024991,10.3135543248187,7.14923172082955,2.34079422240703,4.39819524861365,5.35842587578981,4.43350584105684,8.56170324489939,7.40470592709544,8.82948352432338,7.50949465803873,15.0400770313312,9.92377791247329,3.62749756471256,5.9741837877485,6.39317004238452,5.72987251215055,4.26766339337159,13.1166376483433,14.6485988588303,1.36696704638282,5.15967169908056,2.03713980106683,0.753473828018764,2.05041341581538,2.74533807847827,7.81900777971734,7.41742697315387,4.97519905695926,3.81868247206045,1.26534397432454,3.45643094115643,3.67218158794124,3.55450103224597,5.45906409365444,4.18079473792944,6.6122764580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| |||
|short_description=p2@Tmem59 | |||
}} | |||
Revision as of 03:21, 14 September 2013
| Short description: | p2@Tmem59 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tmem59_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000141013_5end |
| EntrezGene: | Tmem59 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.92e-10 | 25 |
| endodermal cell | 2.84e-07 | 20 |
| endo-epithelial cell | 2.95e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 4.02e-09 | 15 |
| intestinal mucosa | 6.01e-08 | 13 |
| wall of intestine | 6.01e-08 | 13 |
| gastrointestinal system mucosa | 6.01e-08 | 13 |
| intestine | 2.47e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
