FFCP PHASE1:Hg19::chr8:117886797..117886806,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9811|TSSclassifier=S|UniProt=E5RFV8|association_with_transcript=-30bp_to_ENST00000517485_5end|coexpression_cluster_id=C15|description=CAGE_peak_8_at_RAD21_5end|id=chr8:117886797..117886806,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;2.87e-12;2!CL:0000242;2.87e-12;2!CL:0000084;1.06e-10;25!CL:0002615;1.81e-08;3!CL:0002127;2.36e-07;1!CL:0000911;2.36e-07;1!CL:0000814;2.36e-07;1!CL:0000785;5.77e-07;1!CL:0002581;5.77e-07;1!CL:0000819;5.77e-07;1|ontology_enrichment_celltype_v019_2=CL:0000242,1.36e-12,2;CL:0000084,1.15e-10,25;CL:0000827,1.15e-10,25;CL:0000542,3.30e-09,53;CL:0000051,3.30e-09,53;CL:0002615,1.81e-08,3;CL:0000838,1.26e-07,52;CL:0002127,2.23e-07,1;CL:0000914,2.23e-07,1;CL:0000911,2.23e-07,1;CL:0000814,2.23e-07,1;CL:0002042,2.23e-07,1;CL:0002039,2.23e-07,1;CL:0002040,2.23e-07,1;CL:0002041,2.23e-07,1;CL:0002581,3.40e-07,1;CL:0000819,3.60e-07,1|ontology_enrichment_development_v019=UBERON:0000358;2.36e-07;1!UBERON:0001045;5.77e-07;1|ontology_enrichment_disease=DOID:162!3.07e-14!235;DOID:14566!1.08e-13!239;DOID:2531!2.22e-07!51;DOID:0060083!2.22e-07!51|ontology_enrichment_disease_v019=DOID:2531;3.05e-14;51!DOID:0060083;3.05e-14;51!DOID:1240;2.76e-12;39!DOID:1036;3.32e-07;8!DOID:4960;5.77e-07;1!DOID:0060073;5.77e-07;1!DOID:0070004;5.77e-07;1!DOID:8675;5.77e-07;1!DOID:12603;5.77e-07;1|ontology_enrichment_disease_v019_2=DOID:2531,1.67e-22,51;DOID:0060083,1.67e-22,51;DOID:1240,4.64e-16,39;DOID:0050686,4.34e-11,137;DOID:162,3.53e-08,235;DOID:14566,6.55e-08,239;DOID:1036,3.40e-07,8;DOID:0060073,3.60e-07,1;DOID:8675,3.60e-07,1;DOID:4960,4.31e-07,1;DOID:0070004,4.31e-07,1;DOID:12603,5.45e-07,1|ontology_enrichment_uberon=UBERON:0001737!7.48e-08!9;UBERON:0001557!9.72e-07!19|ontology_enrichment_uberon_v019=UBERON:0001154;5.77e-07;1!UBERON:0001153;5.77e-07;1!UBERON:0009854;5.77e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.18e-07,1;UBERON:0001153,9.18e-07,1;UBERON:0001045,9.18e-07,1|phase1_expression=0,0.214100523890983,1.9733616573436,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0.18611685633159,0.337552664482532,0.487185025805993,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.464775771478074,0.310983165046111,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,0.723033089650446,0.992645754591546,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,2.6487785964879,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0.179117045405697,0,0,0,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,2.69004345584465,0,0,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0.828831026872071,0.24538298343828,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.306923946576125,0.280660094433074,0.896974044789907,0.511707249066704,0.804269605718038,1.48418066444991,0,0,0.328508624055237,0,0,0,0,0,0.459257792658427,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,1.30062222588003,0.577076851905779,7.043042491493,4.3045093636782,4.19116680008915,0.191505370132367,0,0,0,0.228234679033192,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |||
|TSSclassifier=S | |||
|UniProt=E5RFV8 | |||
|association_with_transcript=-30bp_to_ENST00000517485_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_8_at_RAD21_5end | |||
|id=chr8:117886797..117886806,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.87e-12;2!CL:0000242;2.87e-12;2!CL:0000084;1.06e-10;25!CL:0002615;1.81e-08;3!CL:0002127;2.36e-07;1!CL:0000911;2.36e-07;1!CL:0000814;2.36e-07;1!CL:0000785;5.77e-07;1!CL:0002581;5.77e-07;1!CL:0000819;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.36e-12,2;CL:0000084,1.15e-10,25;CL:0000827,1.15e-10,25;CL:0000542,3.30e-09,53;CL:0000051,3.30e-09,53;CL:0002615,1.81e-08,3;CL:0000838,1.26e-07,52;CL:0002127,2.23e-07,1;CL:0000914,2.23e-07,1;CL:0000911,2.23e-07,1;CL:0000814,2.23e-07,1;CL:0002042,2.23e-07,1;CL:0002039,2.23e-07,1;CL:0002040,2.23e-07,1;CL:0002041,2.23e-07,1;CL:0002581,3.40e-07,1;CL:0000819,3.60e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.36e-07;1!UBERON:0001045;5.77e-07;1 | |||
|ontology_enrichment_disease=DOID:162!3.07e-14!235;DOID:14566!1.08e-13!239;DOID:2531!2.22e-07!51;DOID:0060083!2.22e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.05e-14;51!DOID:0060083;3.05e-14;51!DOID:1240;2.76e-12;39!DOID:1036;3.32e-07;8!DOID:4960;5.77e-07;1!DOID:0060073;5.77e-07;1!DOID:0070004;5.77e-07;1!DOID:8675;5.77e-07;1!DOID:12603;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.67e-22,51;DOID:0060083,1.67e-22,51;DOID:1240,4.64e-16,39;DOID:0050686,4.34e-11,137;DOID:162,3.53e-08,235;DOID:14566,6.55e-08,239;DOID:1036,3.40e-07,8;DOID:0060073,3.60e-07,1;DOID:8675,3.60e-07,1;DOID:4960,4.31e-07,1;DOID:0070004,4.31e-07,1;DOID:12603,5.45e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.48e-08!9;UBERON:0001557!9.72e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.77e-07;1!UBERON:0001153;5.77e-07;1!UBERON:0009854;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.18e-07,1;UBERON:0001153,9.18e-07,1;UBERON:0001045,9.18e-07,1 | |||
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| |||
|short_description=p8@RAD21 | |||
}} |
Revision as of 03:16, 14 September 2013
Short description: | p8@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RAD21_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -30bp_to_ENST00000517485_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | E5RFV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.36e-12 | 2 |
T cell | 1.15e-10 | 25 |
pro-T cell | 1.15e-10 | 25 |
lymphocyte | 3.30e-09 | 53 |
common lymphoid progenitor | 3.30e-09 | 53 |
adipocyte of omentum tissue | 1.81e-08 | 3 |
lymphoid lineage restricted progenitor cell | 1.26e-07 | 52 |
innate effector T cell | 2.23e-07 | 1 |
immature NK T cell | 2.23e-07 | 1 |
effector T cell | 2.23e-07 | 1 |
mature NK T cell | 2.23e-07 | 1 |
immature NK T cell stage IV | 2.23e-07 | 1 |
immature NK T cell stage I | 2.23e-07 | 1 |
immature NK T cell stage II | 2.23e-07 | 1 |
immature NK T cell stage III | 2.23e-07 | 1 |
perirenal preadipocyte | 3.40e-07 | 1 |
B-1 B cell | 3.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.18e-07 | 1 |
caecum | 9.18e-07 | 1 |
midgut | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.67e-22 | 51 |
immune system cancer | 1.67e-22 | 51 |
leukemia | 4.64e-16 | 39 |
organ system cancer | 4.34e-11 | 137 |
cancer | 3.53e-08 | 235 |
disease of cellular proliferation | 6.55e-08 | 239 |
chronic leukemia | 3.40e-07 | 8 |
lymphatic system cancer | 3.60e-07 | 1 |
lymphosarcoma | 3.60e-07 | 1 |
bone marrow cancer | 4.31e-07 | 1 |
myeloma | 4.31e-07 | 1 |
acute leukemia | 5.45e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.