FFCP PHASE1:Mm9::chr3:97559413..97559417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=431|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:97559413..97559417,-|id=chr3:97559413..97559417,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.10e-08!18;UBERON:0000948!1.10e-08!18;UBERON:0005498!1.10e-08!18;UBERON:0004140!1.10e-08!18;UBERON:0009881!1.10e-08!18;UBERON:0004141!1.10e-08!18;UBERON:0003084!1.10e-08!18;UBERON:0007005!1.10e-08!18;UBERON:0004139!1.10e-08!18;UBERON:0004291!1.10e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.60e-11,18;UBERON:0000948,1.60e-11,18;UBERON:0005498,1.60e-11,18;UBERON:0004140,1.60e-11,18;UBERON:0009881,1.60e-11,18;UBERON:0004141,1.60e-11,18;UBERON:0003084,1.60e-11,18;UBERON:0007005,1.60e-11,18;UBERON:0004139,1.60e-11,18;UBERON:0004291,1.60e-11,18;UBERON:0005418,3.75e-11,5;UBERON:0002472,3.75e-11,5;UBERON:0008784,3.75e-11,5;UBERON:0006058,3.75e-11,5;UBERON:0004709,3.75e-11,5;UBERON:0002529,3.75e-11,5;UBERON:0010538,3.75e-11,5;UBERON:0005420,3.75e-11,5;UBERON:0010758,3.75e-11,5;UBERON:0000978,3.75e-11,5;UBERON:0002103,3.75e-11,5;UBERON:0000376,3.75e-11,5;UBERON:0000154,3.75e-11,5;UBERON:0010709,3.75e-11,5;UBERON:0005730,3.75e-11,5;UBERON:0004535,6.10e-09,23;UBERON:0001009,6.10e-09,23;UBERON:0001374,1.38e-07,1;UBERON:0004252,1.38e-07,1;UBERON:0003663,1.38e-07,1;UBERON:0005090,1.38e-07,1;UBERON:0001630,1.38e-07,1;UBERON:0003661,1.38e-07,1;UBERON:0010890,1.38e-07,1;UBERON:0001383,1.38e-07,1;UBERON:0003914,2.49e-07,47|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.68822784320151,0,0.430761996159075,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0.919218786610021,0,0.255374676170375,0.921639199537461,0.263772575460388,0.274462930807229,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.854230084794618,0.745597783301202,0,0,0,0,0,1.61910957491345,0,0,0.983110940922263,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.13236794963186,1.10420759230197,0,0,0.292780797011547,0,0.766371165625774,0,0,0.127070227073065,0.149790639404823,0,0.502617408451458,0,0.255715457330331,0,0,0,0.373220911830279,0,0.210441855886474,0.520481771850815,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0,0.697601834251224,0.536546802799238,0.700592054203017,0.658239399653922,2.95501435342371,1.13496333364198,1.60819986167866,2.41505126820156,1.47627060636409,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,10.0637744569148,0,0,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0.162964976442026,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0,0.321101179975584,0.117211686592203,0,5.30188947129183,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0.21183207086382,0.220528398054962,0,0.322928853391811,0.180938774784468,0.119372344003136,0,0.582961673259701,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.627264888043406,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,1.31534855718921,0.543216455383447,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr3:97559413..97559417,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=431 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:97559413..97559417,- | |||
|id=chr3:97559413..97559417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.10e-08!18;UBERON:0000948!1.10e-08!18;UBERON:0005498!1.10e-08!18;UBERON:0004140!1.10e-08!18;UBERON:0009881!1.10e-08!18;UBERON:0004141!1.10e-08!18;UBERON:0003084!1.10e-08!18;UBERON:0007005!1.10e-08!18;UBERON:0004139!1.10e-08!18;UBERON:0004291!1.10e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.60e-11,18;UBERON:0000948,1.60e-11,18;UBERON:0005498,1.60e-11,18;UBERON:0004140,1.60e-11,18;UBERON:0009881,1.60e-11,18;UBERON:0004141,1.60e-11,18;UBERON:0003084,1.60e-11,18;UBERON:0007005,1.60e-11,18;UBERON:0004139,1.60e-11,18;UBERON:0004291,1.60e-11,18;UBERON:0005418,3.75e-11,5;UBERON:0002472,3.75e-11,5;UBERON:0008784,3.75e-11,5;UBERON:0006058,3.75e-11,5;UBERON:0004709,3.75e-11,5;UBERON:0002529,3.75e-11,5;UBERON:0010538,3.75e-11,5;UBERON:0005420,3.75e-11,5;UBERON:0010758,3.75e-11,5;UBERON:0000978,3.75e-11,5;UBERON:0002103,3.75e-11,5;UBERON:0000376,3.75e-11,5;UBERON:0000154,3.75e-11,5;UBERON:0010709,3.75e-11,5;UBERON:0005730,3.75e-11,5;UBERON:0004535,6.10e-09,23;UBERON:0001009,6.10e-09,23;UBERON:0001374,1.38e-07,1;UBERON:0004252,1.38e-07,1;UBERON:0003663,1.38e-07,1;UBERON:0005090,1.38e-07,1;UBERON:0001630,1.38e-07,1;UBERON:0003661,1.38e-07,1;UBERON:0010890,1.38e-07,1;UBERON:0001383,1.38e-07,1;UBERON:0003914,2.49e-07,47 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.68822784320151,0,0.430761996159075,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0.919218786610021,0,0.255374676170375,0.921639199537461,0.263772575460388,0.274462930807229,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.854230084794618,0.745597783301202,0,0,0,0,0,1.61910957491345,0,0,0.983110940922263,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.13236794963186,1.10420759230197,0,0,0.292780797011547,0,0.766371165625774,0,0,0.127070227073065,0.149790639404823,0,0.502617408451458,0,0.255715457330331,0,0,0,0.373220911830279,0,0.210441855886474,0.520481771850815,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0,0.697601834251224,0.536546802799238,0.700592054203017,0.658239399653922,2.95501435342371,1.13496333364198,1.60819986167866,2.41505126820156,1.47627060636409,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,10.0637744569148,0,0,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0.162964976442026,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0,0.321101179975584,0.117211686592203,0,5.30188947129183,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0.21183207086382,0.220528398054962,0,0.322928853391811,0.180938774784468,0.119372344003136,0,0.582961673259701,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.627264888043406,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,1.31534855718921,0.543216455383447,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr3:97559413..97559417,- | |||
}} |
Revision as of 03:10, 14 September 2013
Short description: | p@chr3:97559413..97559417, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:97559413..97559417, - |
Coexpression cluster: | MCL_coexpression_mm9:431 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.60e-11 | 18 |
heart | 1.60e-11 | 18 |
primitive heart tube | 1.60e-11 | 18 |
primary heart field | 1.60e-11 | 18 |
anterior lateral plate mesoderm | 1.60e-11 | 18 |
heart tube | 1.60e-11 | 18 |
heart primordium | 1.60e-11 | 18 |
cardiac mesoderm | 1.60e-11 | 18 |
cardiogenic plate | 1.60e-11 | 18 |
heart rudiment | 1.60e-11 | 18 |
hindlimb bud | 3.75e-11 | 5 |
stylopod | 3.75e-11 | 5 |
lower limb segment | 3.75e-11 | 5 |
multi-limb segment region | 3.75e-11 | 5 |
pelvic appendage | 3.75e-11 | 5 |
limb segment | 3.75e-11 | 5 |
paired limb/fin segment | 3.75e-11 | 5 |
pelvic appendage bud | 3.75e-11 | 5 |
subdivision of organism along appendicular axis | 3.75e-11 | 5 |
leg | 3.75e-11 | 5 |
hindlimb | 3.75e-11 | 5 |
hindlimb stylopod | 3.75e-11 | 5 |
posterior region of body | 3.75e-11 | 5 |
pelvic complex | 3.75e-11 | 5 |
hindlimb/pelvic fin field | 3.75e-11 | 5 |
cardiovascular system | 6.10e-09 | 23 |
circulatory system | 6.10e-09 | 23 |
biceps femoris | 1.38e-07 | 1 |
hindlimb stylopod muscle | 1.38e-07 | 1 |
hindlimb muscle | 1.38e-07 | 1 |
muscle structure | 1.38e-07 | 1 |
muscle organ | 1.38e-07 | 1 |
limb muscle | 1.38e-07 | 1 |
pelvic complex muscle | 1.38e-07 | 1 |
muscle of leg | 1.38e-07 | 1 |
epithelial tube | 2.49e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.