FFCP PHASE1:Hg19::chr8:101734308..101734321,-: Difference between revisions
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{{FFCP | 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84,1092.58175166245,919.158965287846,1003.80082454812,636.218326459733,462.298841365746,2050.57284507212,1365.51393889746,1948.83113459318,703.842621873754,703.15226646931,974.656900633245,904.181137898489,1542.12952762174,1199.64920282825,512.275678945635,501.521088578454,899.450580149427,846.116661820816,1050.33268022242,1046.76146493153,1158.07091495853,930.798734362556,922.130384299655,309.820879586477,647.160356672405,354.632262775006,299.950481200466,293.311912993961,336.508174892475,241.627077075609,825.282733429905,246.683919539865,255.777422680852,158.474056487661,2092.50935844187,1800.21797828652,1090.29958961286,3804.60676332909,626.610782852556,1339.2982565566,5492.67364129669,911.173127951252,1547.88469723081,685.387787851422,1820.25152664589,1112.33886372858,1085.1158167469,203.895967962933,204.642461836828,340.826527430453,243.516711144602,839.606331842967,2611.90000130762,417.313601025396,1702.43364540113,1513.60148024629,260.351092236847,408.92100621809,322.298735849651,336.257056625867,464.179503061089,1405.96988216806,488.054874858893,255.838074924795,205.079507968963,651.366257111549,1258.69454381065,921.979868622138,385.875888833701,2546.55287586909,428.271439918953,257.817543915034,520.749339796885,476.534120025768,1239.93281126671,642.233875158892,2363.77707022587,712.721403245195,1861.2155865124,1243.34266867524,1047.25838764835,2316.34409988837,723.363520465946,809.612558616757,715.947501872861,676.094369073492,447.938020899278,255.128896706975,596.413162345829,870.003670765514,829.285725729397,106.178329298815,352.133427516927,575.267957943747,610.538718275338,451.03528555494,1228.12313507113,612.557387595256,1896.02587918802,1650.20715634889,817.765723600671,970.310689891188,1146.78201396426,433.632547245324,881.798513348798,579.528629322898,605.219004115376,786.281821665797,373.205007456142,678.858823177829,1281.28275381934,975.312302928196,1346.60713493249,1021.14997488576,1281.00838432796,1170.4808158949,518.538835655027,1419.76713213705,400.777474491458,970.926193736858,203.838487592362,925.49981421194,757.037408777538,622.347665392975,683.095579117236,869.579389868816,1704.88689879642,1149.80161377397,578.632054119233,2324.22344099002,1231.87223827423,3129.48080365914,1738.40607745333,645.255615328309,687.327993850598,283.575948294903,381.357455742808,546.518695612214,610.873331135958,1100.85337924489,1125.84909318397,1624.45429320535,596.373873066405,398.979331003525,601.333657691407,676.937469546686,1502.55695070243,1103.44612996633,637.709903498708,1115.30618323896,2250.025905794,486.542151363089,1786.71309510212,1262.36827013058,983.187935562795,941.150860444303,713.025505152684,795.635306065327,1362.09552379644|short_description=p1@PABPC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=26986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |||
|TSSclassifier=S | |||
|UniProt=E7EQV3,E5RJM8,E5RH24,P11940 | |||
|association_with_transcript=0bp_to_ENST00000347137,ENST00000519004,ENST00000519363,ENST00000520142,NM_002568,uc003yjs.1,uc003yjt.1,uc011lhd.1_5end | |||
|description=CAGE_peak_1_at_PABPC1_5end | |||
|id=chr8:101734308..101734321,- | |||
|ontology_enrichment_celltype=CL:0000988!7.52e-16!182;CL:0000037!1.61e-14!172;CL:0000566!1.61e-14!172;CL:0002032!1.72e-14!165;CL:0000837!1.72e-14!165;CL:0000763!1.46e-12!112;CL:0000049!1.46e-12!112;CL:0000860!2.91e-12!45;CL:0002057!6.98e-12!42;CL:0002087!1.43e-11!119;CL:0000738!2.28e-10!140;CL:0002031!1.41e-09!124;CL:0000063!1.76e-09!578;CL:0002194!2.88e-09!63;CL:0000576!2.88e-09!63;CL:0000040!2.88e-09!63;CL:0000559!2.88e-09!63;CL:0002009!8.55e-09!65;CL:0000839!1.10e-08!70;CL:0000766!2.28e-08!76;CL:0000548!2.80e-08!679;CL:0000004!2.80e-08!679;CL:0000255!2.80e-08!679;CL:0000557!3.03e-08!71;CL:0000012!4.24e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-12;33!CL:0002057;1.00e-12;33!CL:0000576;3.33e-08;48!CL:0000473;1.68e-07;39!CL:0000234;1.68e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.40e-15,177;CL:0000037,5.46e-14,168;CL:0002032,5.80e-14,161;CL:0000837,5.80e-14,161;CL:0000763,4.59e-12,108;CL:0000049,4.59e-12,108;CL:0000860,6.98e-12,42;CL:0002057,6.98e-12,42;CL:0002087,4.43e-11,115;CL:0000738,6.80e-10,136;CL:0002031,4.11e-09,120;CL:0002194,8.28e-09,59;CL:0000576,8.28e-09,59;CL:0000040,8.28e-09,59;CL:0000559,8.28e-09,59;CL:0000473,1.85e-08,48;CL:0000234,1.85e-08,48;CL:0002009,2.46e-08,61;CL:0000839,3.17e-08,66;CL:0000766,6.59e-08,72;CL:0000557,8.72e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-09;42 | |||
|ontology_enrichment_disease=DOID:162!2.82e-14!235;DOID:14566!1.60e-13!239;DOID:2531!1.05e-11!51;DOID:0060083!1.05e-11!51;DOID:1240!1.47e-09!39;DOID:0050686!3.26e-09!137;DOID:8692!5.37e-08!31;DOID:0050687!1.53e-07!143;DOID:1749!8.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.26e-08;31!DOID:1240;1.08e-07;39!DOID:2531;5.76e-07;51!DOID:0060083;5.76e-07;51!DOID:1749;7.96e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.82e-14,235;DOID:14566,1.60e-13,239;DOID:2531,1.05e-11,51;DOID:0060083,1.05e-11,51;DOID:1240,1.47e-09,39;DOID:0050686,3.26e-09,137;DOID:8692,5.37e-08,31;DOID:0050687,1.53e-07,143;DOID:1749,8.01e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.43e-11!112;UBERON:0002390!9.82e-11!102;UBERON:0003061!9.82e-11!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.57e-10,108;UBERON:0002390,2.98e-10,98;UBERON:0003061,2.98e-10,98;UBERON:0002405,5.87e-07,93 | |||
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| |||
|short_description=p1@PABPC1 | |||
}} |
Revision as of 02:51, 14 September 2013
Short description: | p1@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PABPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347137, ENST00000519004, ENST00000519363, ENST00000520142, NM_002568, uc003yjs.1, uc003yjt.1, uc011lhd.1_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | E7EQV3E5RJM8E5RH24P11940 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.40e-15 | 177 |
hematopoietic stem cell | 5.46e-14 | 168 |
hematopoietic oligopotent progenitor cell | 5.80e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.80e-14 | 161 |
myeloid cell | 4.59e-12 | 108 |
common myeloid progenitor | 4.59e-12 | 108 |
classical monocyte | 6.98e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.98e-12 | 42 |
nongranular leukocyte | 4.43e-11 | 115 |
leukocyte | 6.80e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.11e-09 | 120 |
monopoietic cell | 8.28e-09 | 59 |
monocyte | 8.28e-09 | 59 |
monoblast | 8.28e-09 | 59 |
promonocyte | 8.28e-09 | 59 |
defensive cell | 1.85e-08 | 48 |
phagocyte | 1.85e-08 | 48 |
macrophage dendritic cell progenitor | 2.46e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-08 | 66 |
myeloid leukocyte | 6.59e-08 | 72 |
granulocyte monocyte progenitor cell | 8.72e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.57e-10 | 108 |
hematopoietic system | 2.98e-10 | 98 |
blood island | 2.98e-10 | 98 |
immune system | 5.87e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.82e-14 | 235 |
disease of cellular proliferation | 1.60e-13 | 239 |
hematologic cancer | 1.05e-11 | 51 |
immune system cancer | 1.05e-11 | 51 |
leukemia | 1.47e-09 | 39 |
organ system cancer | 3.26e-09 | 137 |
myeloid leukemia | 5.37e-08 | 31 |
cell type cancer | 1.53e-07 | 143 |
squamous cell carcinoma | 8.01e-07 | 14 |
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