FFCP PHASE1:Hg19::chr7:86975021..86975036,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54677|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2366|TSSclassifier=S|UniProt=Q9UKG9|association_with_transcript=10bp_to_ENST00000331536_5end|coexpression_cluster_id=C4703|description=CAGE_peak_3_at_CROT_5end|id=chr7:86975021..86975036,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002537;2.79e-09;5!CL:0000349;4.06e-09;19!CL:0002251;8.65e-08;20|ontology_enrichment_celltype_v019_2=CL:0002537,3.46e-09,5;CL:0000349,4.98e-09,19;CL:0000223,1.37e-08,58;CL:0002076,6.13e-08,42;CL:0002251,8.31e-08,20|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.12e-07!169;UBERON:0000925!1.12e-07!169;UBERON:0006595!1.12e-07!169;UBERON:0000161!2.59e-07!35;UBERON:0005631!9.23e-07!14;UBERON:0000158!9.23e-07!14|ontology_enrichment_uberon_v019=UBERON:0005631;1.23e-10;10!UBERON:0000158;1.23e-10;10!UBERON:0000478;6.27e-08;24!UBERON:0003343;4.04e-07;4!UBERON:0004785;4.04e-07;4!UBERON:0000974;7.63e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.60e-13,14;UBERON:0000158,1.60e-13,14;UBERON:0003124,7.28e-09,7;UBERON:0000478,5.74e-08,24;UBERON:0004119,6.73e-08,160;UBERON:0000925,6.73e-08,160;UBERON:0006595,6.73e-08,160;UBERON:0005156,7.79e-08,59;UBERON:0000990,7.79e-08,59|phase1_expression=0.54503513781167,0,0.563817616383885,1.0007329835313,0,1.74467704820074,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,3.14859585844162,1.77936752594749,0.376627918784408,0.152826811495903,0.821005894499457,0.708397031823113,0.393364276848904,0.767658796194425,0.464448369948228,0.919421224478927,0,0,0.542270404062111,0.284338464974843,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.59675003159727,0,0,0,0.889509253863555,0.426730222566507,0,0,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.83593247695339,0,0,0,0.557052284425868,0,0.443067789167242,0.812411591295047,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.453237370790265,0.383220493601921,0.68725489096526,1.01207876807801,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0,0.795285947051099,0.486634870302636,0.378139268656271,0.443458794925128,0.43917392846563,0.654895377488563,1.09288586487763,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.625098097988558,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,2.64818361626438,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0.61246251376468,0.122834317311768,0.103325781175765,4.75201142912821,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0.877955241761676,0,0,0.453728732640084,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.276149695926898,6.14255015911485,0.355009592516614,0.201504196455281,1.01736355386293,1.35282597214308,0.272746120590835,0.573609190778008,0,0.662648841607426,0.232387885739037,1.0366105501537,0.252320850875628,1.82488679537915,0,0,0,0.464367928031979,0,0.236613600079688,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0.882926198829301,1.72183813960359,0,0.109750285408626,1.1240175325762,0.201057944823262,0.555530670951178,0,0,0,1.97081688457631,0.939269553886573,0.144366447761074,0,0,3.1608175918371,1.71697232418975,0,0,0.297262324577456,3.74935335947108,0.671928512795438,0.708875486211932,0.358234090811393,0.871901815541886,0,2.46331618947972,2.46535615237033,0,0.288239906833923,0.37872730027914,0.126995788584338,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0,1.16344544182,0,0,1.59562869950922,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,1.80863626235752,3.48613383440118,0.599837947092342,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.358121926479791,0.560425719967636,0.985153801009636,0.646882724578552,0.256686072559497,5.08189248444927,2.60279707715243,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.347534457872331,0.195801157462741,0,0.413536052245775,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2366 | |||
|TSSclassifier=S | |||
|UniProt=Q9UKG9 | |||
|association_with_transcript=10bp_to_ENST00000331536_5end | |||
|coexpression_cluster_id=C4703 | |||
|description=CAGE_peak_3_at_CROT_5end | |||
|id=chr7:86975021..86975036,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.79e-09;5!CL:0000349;4.06e-09;19!CL:0002251;8.65e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.46e-09,5;CL:0000349,4.98e-09,19;CL:0000223,1.37e-08,58;CL:0002076,6.13e-08,42;CL:0002251,8.31e-08,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.12e-07!169;UBERON:0000925!1.12e-07!169;UBERON:0006595!1.12e-07!169;UBERON:0000161!2.59e-07!35;UBERON:0005631!9.23e-07!14;UBERON:0000158!9.23e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.23e-10;10!UBERON:0000158;1.23e-10;10!UBERON:0000478;6.27e-08;24!UBERON:0003343;4.04e-07;4!UBERON:0004785;4.04e-07;4!UBERON:0000974;7.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.60e-13,14;UBERON:0000158,1.60e-13,14;UBERON:0003124,7.28e-09,7;UBERON:0000478,5.74e-08,24;UBERON:0004119,6.73e-08,160;UBERON:0000925,6.73e-08,160;UBERON:0006595,6.73e-08,160;UBERON:0005156,7.79e-08,59;UBERON:0000990,7.79e-08,59 | |||
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| |||
|short_description=p3@CROT | |||
}} |
Revision as of 02:18, 14 September 2013
Short description: | p3@CROT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CROT_5end |
Coexpression cluster: | C4703_amniotic_mesenchymal_cervical_seminal_chorionic_Fibroblast_glioblastoma |
Association with transcript: | 10bp_to_ENST00000331536_5end |
EntrezGene: | CROT |
HGNC: | 2366 |
UniProt: | Q9UKG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.46e-09 | 5 |
extraembryonic cell | 4.98e-09 | 19 |
endodermal cell | 1.37e-08 | 58 |
endo-epithelial cell | 6.13e-08 | 42 |
epithelial cell of alimentary canal | 8.31e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.60e-13 | 14 |
membranous layer | 1.60e-13 | 14 |
chorion | 7.28e-09 | 7 |
extraembryonic structure | 5.74e-08 | 24 |
endoderm-derived structure | 6.73e-08 | 160 |
endoderm | 6.73e-08 | 160 |
presumptive endoderm | 6.73e-08 | 160 |
reproductive structure | 7.79e-08 | 59 |
reproductive system | 7.79e-08 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.