FFCP PHASE1:Hg19::chr7:83278189..83278204,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9723|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10727|TSSclassifier=S|UniProt=F8WCZ5|association_with_transcript=-63bp_to_ENST00000453333_5end|coexpression_cluster_id=C1540|description=CAGE_peak_3_at_SEMA3E_5end|id=chr7:83278189..83278204,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.59e-30!115;UBERON:0005743!1.48e-24!86;UBERON:0003075!4.85e-24!86;UBERON:0007284!4.85e-24!86;UBERON:0001017!1.36e-22!82;UBERON:0000073!2.07e-22!94;UBERON:0001016!2.07e-22!94;UBERON:0002346!2.24e-22!90;UBERON:0001049!2.90e-22!57;UBERON:0005068!2.90e-22!57;UBERON:0006241!2.90e-22!57;UBERON:0007135!2.90e-22!57;UBERON:0002616!3.76e-20!59;UBERON:0000955!4.87e-19!69;UBERON:0006238!4.87e-19!69;UBERON:0003056!1.16e-18!61;UBERON:0000153!1.74e-18!129;UBERON:0007811!1.74e-18!129;UBERON:0000033!1.57e-17!123;UBERON:0003080!1.82e-17!42;UBERON:0002780!7.95e-17!41;UBERON:0001890!7.95e-17!41;UBERON:0006240!7.95e-17!41;UBERON:0002020!1.44e-15!34;UBERON:0003528!1.44e-15!34;UBERON:0004121!1.69e-15!169;UBERON:0001893!3.11e-15!34;UBERON:0000924!8.89e-15!173;UBERON:0006601!8.89e-15!173;UBERON:0002791!1.32e-14!33;UBERON:0001869!2.13e-14!32;UBERON:0000481!6.83e-14!347;UBERON:0000475!6.10e-13!365;UBERON:0002619!2.71e-12!22;UBERON:0001950!3.95e-11!20;UBERON:0000064!5.45e-11!219;UBERON:0000956!6.85e-11!25;UBERON:0000203!6.85e-11!25;UBERON:0000483!1.10e-09!309;UBERON:0000119!1.59e-09!312;UBERON:0000477!1.73e-07!286;UBERON:0000062!2.02e-07!511;UBERON:0004111!2.94e-07!241;UBERON:0007625!3.40e-07!11;UBERON:0000063!6.42e-07!97;UBERON:0000025!7.54e-07!194;UBERON:0000922!8.12e-07!612|ontology_enrichment_uberon_v019=UBERON:0003528;2.82e-16;34!UBERON:0002020;2.82e-16;34!UBERON:0002619;5.57e-16;22!UBERON:0002791;1.55e-15;32!UBERON:0001893;1.59e-15;34!UBERON:0001869;2.59e-15;32!UBERON:0002780;2.19e-14;41!UBERON:0001890;2.19e-14;41!UBERON:0001950;5.38e-14;20!UBERON:0000073;1.75e-13;53!UBERON:0002616;1.75e-13;53!UBERON:0000956;1.77e-13;25!UBERON:0000203;1.77e-13;25!UBERON:0001017;1.76e-09;75!UBERON:0000955;4.42e-09;68!UBERON:0002298;3.93e-08;6!UBERON:0007625;4.25e-08;11!UBERON:0000125;5.74e-08;9!UBERON:0002308;5.74e-08;9!UBERON:0007023;6.06e-08;114!UBERON:0001016;6.87e-08;83!UBERON:0000200;2.75e-07;6!UBERON:0002021;5.55e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.93e-29,114;UBERON:0003075,1.36e-27,82;UBERON:0007284,1.36e-27,82;UBERON:0002346,1.43e-25,86;UBERON:0001049,2.78e-25,56;UBERON:0005068,2.78e-25,56;UBERON:0006241,2.78e-25,56;UBERON:0007135,2.78e-25,56;UBERON:0003056,1.22e-24,61;UBERON:0000073,4.66e-24,53;UBERON:0002616,4.66e-24,53;UBERON:0010371,4.52e-22,104;UBERON:0000955,1.11e-20,68;UBERON:0006238,1.11e-20,68;UBERON:0002780,1.25e-20,41;UBERON:0001890,1.25e-20,41;UBERON:0003080,1.25e-20,41;UBERON:0006240,1.25e-20,41;UBERON:0001017,3.33e-20,81;UBERON:0003528,6.60e-20,34;UBERON:0002020,6.60e-20,34;UBERON:0001893,2.10e-19,34;UBERON:0001869,5.39e-18,32;UBERON:0001016,5.65e-18,89;UBERON:0002791,1.03e-17,32;UBERON:0011216,4.09e-17,223;UBERON:0010314,1.06e-16,132;UBERON:0002619,4.38e-16,22;UBERON:0001950,3.81e-14,20;UBERON:0000956,1.44e-13,25;UBERON:0000203,1.44e-13,25;UBERON:0004121,1.84e-11,171;UBERON:0000924,1.84e-11,171;UBERON:0006601,1.84e-11,171;UBERON:0007625,3.45e-08,11;UBERON:0002298,3.54e-08,6;UBERON:0000125,5.50e-08,9;UBERON:0002308,5.50e-08,9;UBERON:0000200,1.51e-07,6;UBERON:0002021,5.44e-07,5;UBERON:0000483,6.64e-07,306|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0.866364470720326,1.98838425436749,0.672325146451775,0,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,0,1.41802225746102,4.87804674417641,2.19586964232815,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0,0.490385709340376,0.302714855289863,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0.23486899728753,0,0,0.408308342509787,0.491337269247072,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.464775771478074,1.0366105501537,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,1.88724591328378,0.658501712451753,0,0,0.185176890317059,0,0,1.443313420252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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9723 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10727 | |||
|TSSclassifier=S | |||
|UniProt=F8WCZ5 | |||
|association_with_transcript=-63bp_to_ENST00000453333_5end | |||
|coexpression_cluster_id=C1540 | |||
|description=CAGE_peak_3_at_SEMA3E_5end | |||
|id=chr7:83278189..83278204,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@SEMA3E | |||
}} |
Revision as of 02:14, 14 September 2013
Short description: | p3@SEMA3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SEMA3E_5end |
Coexpression cluster: | C1540_gastric_pharyngeal_mucinous_smallcell_transitionalcell_rhabdomyosarcoma_somatostatinoma |
Association with transcript: | -63bp_to_ENST00000453333_5end |
EntrezGene: | SEMA3E |
HGNC: | 10727 |
UniProt: | F8WCZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.