FFCP PHASE1:Mm9::chr3:17226363..17226378,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=224|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:17226363..17226378,-|id=chr3:17226363..17226378,-|ontology_enrichment_celltype=CL:0000117!8.84e-09!23;CL:0000337!8.84e-09!23;CL:0000120!1.15e-07!3;CL:0002613!1.77e-07!3|ontology_enrichment_celltype_v019_2=CL:0000120,1.16e-30,3;CL:0002613,8.94e-30,3;CL:0000117,1.77e-15,23;CL:0000337,1.77e-15,23;CL:0000540,8.72e-11,33;CL:0000047,8.72e-11,33;CL:0000031,8.72e-11,33;CL:0000404,8.72e-11,33;CL:0000393,4.07e-09,39;CL:0000211,4.07e-09,39;CL:0002319,2.93e-08,43;CL:0000221,4.54e-08,44;CL:0000133,4.54e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.92e-07!5;UBERON:0002435!1.92e-07!5;UBERON:0000204!1.92e-07!5;UBERON:0010082!1.92e-07!5;UBERON:0000970!1.95e-07!9;UBERON:0000019!1.95e-07!9;UBERON:0000047!1.95e-07!9;UBERON:0004088!1.95e-07!9;UBERON:0002104!1.95e-07!9;UBERON:0001456!1.95e-07!9;UBERON:0003072!1.95e-07!9;UBERON:0003071!1.95e-07!9;UBERON:0004128!1.95e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.93e-31,5;UBERON:0002435,3.93e-31,5;UBERON:0000204,3.93e-31,5;UBERON:0010082,3.93e-31,5;UBERON:0002420,1.15e-19,8;UBERON:0007245,1.15e-19,8;UBERON:0010009,1.15e-19,8;UBERON:0010011,1.15e-19,8;UBERON:0000454,1.15e-19,8;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003056,5.05e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.244981598429908,0.383381884072945,0,0,0,0,2.37395317914349,2.47016637726506,2.6045668527838,0,0,0,0,0.569486723196412,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.90422890701429,0.544291993210623,1.5373646434182,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0.715308569841963,0.290692833264657,0.282328141245992,0,0,0,0,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0,0|short_description=p@chr3:17226363..17226378,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:17226363..17226378,- | |||
|id=chr3:17226363..17226378,- | |||
|ontology_enrichment_celltype=CL:0000117!8.84e-09!23;CL:0000337!8.84e-09!23;CL:0000120!1.15e-07!3;CL:0002613!1.77e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.16e-30,3;CL:0002613,8.94e-30,3;CL:0000117,1.77e-15,23;CL:0000337,1.77e-15,23;CL:0000540,8.72e-11,33;CL:0000047,8.72e-11,33;CL:0000031,8.72e-11,33;CL:0000404,8.72e-11,33;CL:0000393,4.07e-09,39;CL:0000211,4.07e-09,39;CL:0002319,2.93e-08,43;CL:0000221,4.54e-08,44;CL:0000133,4.54e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.92e-07!5;UBERON:0002435!1.92e-07!5;UBERON:0000204!1.92e-07!5;UBERON:0010082!1.92e-07!5;UBERON:0000970!1.95e-07!9;UBERON:0000019!1.95e-07!9;UBERON:0000047!1.95e-07!9;UBERON:0004088!1.95e-07!9;UBERON:0002104!1.95e-07!9;UBERON:0001456!1.95e-07!9;UBERON:0003072!1.95e-07!9;UBERON:0003071!1.95e-07!9;UBERON:0004128!1.95e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.93e-31,5;UBERON:0002435,3.93e-31,5;UBERON:0000204,3.93e-31,5;UBERON:0010082,3.93e-31,5;UBERON:0002420,1.15e-19,8;UBERON:0007245,1.15e-19,8;UBERON:0010009,1.15e-19,8;UBERON:0010011,1.15e-19,8;UBERON:0000454,1.15e-19,8;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003056,5.05e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.244981598429908,0.383381884072945,0,0,0,0,2.37395317914349,2.47016637726506,2.6045668527838,0,0,0,0,0.569486723196412,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.90422890701429,0.544291993210623,1.5373646434182,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0.715308569841963,0.290692833264657,0.282328141245992,0,0,0,0,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr3:17226363..17226378,- | |||
}} |
Revision as of 01:55, 14 September 2013
Short description: | p@chr3:17226363..17226378, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:17226363..17226378, - |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.16e-30 | 3 |
striatum neuron | 8.94e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.77e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-15 | 23 |
neuron | 8.72e-11 | 33 |
neuronal stem cell | 8.72e-11 | 33 |
neuroblast | 8.72e-11 | 33 |
electrically signaling cell | 8.72e-11 | 33 |
electrically responsive cell | 4.07e-09 | 39 |
electrically active cell | 4.07e-09 | 39 |
neural cell | 2.93e-08 | 43 |
ectodermal cell | 4.54e-08 | 44 |
neurectodermal cell | 4.54e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 3.93e-31 | 5 |
striatum | 3.93e-31 | 5 |
ventral part of telencephalon | 3.93e-31 | 5 |
future corpus striatum | 3.93e-31 | 5 |
basal ganglion | 1.15e-19 | 8 |
nuclear complex of neuraxis | 1.15e-19 | 8 |
aggregate regional part of brain | 1.15e-19 | 8 |
collection of basal ganglia | 1.15e-19 | 8 |
cerebral subcortex | 1.15e-19 | 8 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
pre-chordal neural plate | 5.05e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.